Michael Seidl
@mfseidl.bsky.social
Associate Professor, Microbial Genome Evolution, Utrecht University, the Netherlands
Reposted by Michael Seidl
TE dynamics across high-quality #genome assemblies of 75 bee species to quantify their diversity in an evolutionary context link.springer.com/article/10.1...
A comparative analysis of transposable element diversity and evolution across 75 bee genomes - BMC Genomics
Transposable elements (TEs) are repetitive DNA sequences that can alter their position and abundance within genomes. While TEs are known to have various impacts on genome structure and function, our u...
link.springer.com
November 15, 2025 at 2:05 PM
TE dynamics across high-quality #genome assemblies of 75 bee species to quantify their diversity in an evolutionary context link.springer.com/article/10.1...
Reposted by Michael Seidl
Reposted by Michael Seidl
My department at UT Austin is looking to hire an Assistant Professor in Evolutionary Biology, broadly defined. Feel free to reach out to me with any questions you may have.
apply.interfolio.com/177547
apply.interfolio.com/177547
Apply - Interfolio
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apply.interfolio.com
November 13, 2025 at 3:23 PM
My department at UT Austin is looking to hire an Assistant Professor in Evolutionary Biology, broadly defined. Feel free to reach out to me with any questions you may have.
apply.interfolio.com/177547
apply.interfolio.com/177547
Reposted by Michael Seidl
New paper led by @metalichen.bsky.social from our group presenting a chromosome-level assembly of the Trebouxia photobiont alga from the lichen Xanthoria parietina - a resource we hope will enable significant new insight into the symbiosis @newphyt.bsky.social doi.org/10.1111/nph....
November 12, 2025 at 4:29 PM
New paper led by @metalichen.bsky.social from our group presenting a chromosome-level assembly of the Trebouxia photobiont alga from the lichen Xanthoria parietina - a resource we hope will enable significant new insight into the symbiosis @newphyt.bsky.social doi.org/10.1111/nph....
Reposted by Michael Seidl
Our paper on the #genome of the Trebouxia #photobiont from Xanthoria is now out in @newphyt.bsky.social! Check below for a near-chromosome level assembly, secretome analysis, evidence of ancient HGT, and transcriptomic comparison of the alga in symbiosis and in pure culture
doi.org/10.1111/nph.70728
doi.org/10.1111/nph.70728
November 12, 2025 at 3:46 PM
Our paper on the #genome of the Trebouxia #photobiont from Xanthoria is now out in @newphyt.bsky.social! Check below for a near-chromosome level assembly, secretome analysis, evidence of ancient HGT, and transcriptomic comparison of the alga in symbiosis and in pure culture
doi.org/10.1111/nph.70728
doi.org/10.1111/nph.70728
Reposted by Michael Seidl
TEs aren’t just genomic parasites, they’re also engines of genomic novelty.
Our new study with ~2,000 Z. tritici genomes shows repeated TE mobilization waves during global expansion.
With @danielcroll.bsky.social & @guidopuccetti.bsky.social
🧬 www.nature.com/articles/s41...
#TEworldwide
Our new study with ~2,000 Z. tritici genomes shows repeated TE mobilization waves during global expansion.
With @danielcroll.bsky.social & @guidopuccetti.bsky.social
🧬 www.nature.com/articles/s41...
#TEworldwide
Historic transposon mobilisation waves create distinct pools of adaptive variants in a major crop pathogen - Nature Communications
In this study, the authors analysed a large genomic dataset to trace how jumping genes shaped the global spread of a major wheat pathogen and reveal bursts of activity over decades that drove adaptati...
www.nature.com
November 12, 2025 at 1:17 PM
TEs aren’t just genomic parasites, they’re also engines of genomic novelty.
Our new study with ~2,000 Z. tritici genomes shows repeated TE mobilization waves during global expansion.
With @danielcroll.bsky.social & @guidopuccetti.bsky.social
🧬 www.nature.com/articles/s41...
#TEworldwide
Our new study with ~2,000 Z. tritici genomes shows repeated TE mobilization waves during global expansion.
With @danielcroll.bsky.social & @guidopuccetti.bsky.social
🧬 www.nature.com/articles/s41...
#TEworldwide
Reposted by Michael Seidl
We are looking for a PhD student to work on an exciting plastid endosymbiosis in microbial eukaryotes. This position involves sampling, exciting microscopy such as CARDFISH, ExM and FIBSEM, single-cell transcriptomics and more. #protistsonsky 1/2
November 12, 2025 at 9:50 AM
We are looking for a PhD student to work on an exciting plastid endosymbiosis in microbial eukaryotes. This position involves sampling, exciting microscopy such as CARDFISH, ExM and FIBSEM, single-cell transcriptomics and more. #protistsonsky 1/2
Reposted by Michael Seidl
How do fungi explore a root system over time?
Spatial & temporal tracking of the Nicotiana root symbiosis with arbuscular mycorrhiza fungi using MycoRed.
Videos, images & optimised Rhizotrons by Nicolas Garcia Hernandez @slcuplants.bsky.social
Science behind it: journals.plos.org/plosbiology/...
Spatial & temporal tracking of the Nicotiana root symbiosis with arbuscular mycorrhiza fungi using MycoRed.
Videos, images & optimised Rhizotrons by Nicolas Garcia Hernandez @slcuplants.bsky.social
Science behind it: journals.plos.org/plosbiology/...
January 20, 2025 at 12:53 PM
How do fungi explore a root system over time?
Spatial & temporal tracking of the Nicotiana root symbiosis with arbuscular mycorrhiza fungi using MycoRed.
Videos, images & optimised Rhizotrons by Nicolas Garcia Hernandez @slcuplants.bsky.social
Science behind it: journals.plos.org/plosbiology/...
Spatial & temporal tracking of the Nicotiana root symbiosis with arbuscular mycorrhiza fungi using MycoRed.
Videos, images & optimised Rhizotrons by Nicolas Garcia Hernandez @slcuplants.bsky.social
Science behind it: journals.plos.org/plosbiology/...
Reposted by Michael Seidl
Registration is now open for the 2026 edition of our UU PhD summer school. Check out the not-to-be-missed speaker lineup 🤩🤩 signup now!! @utrechtuniversity.bsky.social @utrechtpmi.bsky.social @epsgraduateschool.bsky.social @rlberendsen.bsky.social @mproveniers.bsky.social @kaisakajala.bsky.social
We are beyond excited to reveal the full line-up for our Environmental Signaling in Plants summer school 2026!
Registration is now open here eps.sites.uu.nl - we look forward to seeing you in Utrecht on 24th-26th August!
Registration is now open here eps.sites.uu.nl - we look forward to seeing you in Utrecht on 24th-26th August!
November 11, 2025 at 5:28 PM
Registration is now open for the 2026 edition of our UU PhD summer school. Check out the not-to-be-missed speaker lineup 🤩🤩 signup now!! @utrechtuniversity.bsky.social @utrechtpmi.bsky.social @epsgraduateschool.bsky.social @rlberendsen.bsky.social @mproveniers.bsky.social @kaisakajala.bsky.social
Reposted by Michael Seidl
🌿 3 new PhD positions in the Ton lab @PPS_UoS. Part of the ERC project '#PlantMemo', exploring how plants remember & respond to stress.
🧬 PhD 1 (UK only)👉 www.findaphd.com/phds/project...
🦠 PhD 2 (UK & EU)👉 www.findaphd.com/phds/project...
🌱 PhD 3 (UK only)👉 www.findaphd.com/phds/project...
#PhD
🧬 PhD 1 (UK only)👉 www.findaphd.com/phds/project...
🦠 PhD 2 (UK & EU)👉 www.findaphd.com/phds/project...
🌱 PhD 3 (UK only)👉 www.findaphd.com/phds/project...
#PhD
November 11, 2025 at 7:19 PM
🌿 3 new PhD positions in the Ton lab @PPS_UoS. Part of the ERC project '#PlantMemo', exploring how plants remember & respond to stress.
🧬 PhD 1 (UK only)👉 www.findaphd.com/phds/project...
🦠 PhD 2 (UK & EU)👉 www.findaphd.com/phds/project...
🌱 PhD 3 (UK only)👉 www.findaphd.com/phds/project...
#PhD
🧬 PhD 1 (UK only)👉 www.findaphd.com/phds/project...
🦠 PhD 2 (UK & EU)👉 www.findaphd.com/phds/project...
🌱 PhD 3 (UK only)👉 www.findaphd.com/phds/project...
#PhD
Reposted by Michael Seidl
We are beyond excited to reveal the full line-up for our Environmental Signaling in Plants summer school 2026!
Registration is now open here eps.sites.uu.nl - we look forward to seeing you in Utrecht on 24th-26th August!
Registration is now open here eps.sites.uu.nl - we look forward to seeing you in Utrecht on 24th-26th August!
November 11, 2025 at 3:59 PM
We are beyond excited to reveal the full line-up for our Environmental Signaling in Plants summer school 2026!
Registration is now open here eps.sites.uu.nl - we look forward to seeing you in Utrecht on 24th-26th August!
Registration is now open here eps.sites.uu.nl - we look forward to seeing you in Utrecht on 24th-26th August!
Reposted by Michael Seidl
A lettuce receptor-like kinase recognizes the highly conserved heptapeptide motif within microbial NEP1-like proteins https://www.biorxiv.org/content/10.1101/2025.11.10.687460v1
November 11, 2025 at 2:24 PM
A lettuce receptor-like kinase recognizes the highly conserved heptapeptide motif within microbial NEP1-like proteins https://www.biorxiv.org/content/10.1101/2025.11.10.687460v1
Reposted by Michael Seidl
Plz RP. Come join us at @slcuplants.bsky.social @cam.ac.uk to study effector-targeted plant processes impacting plant cell biology and development.
www.cam.ac.uk/jobs/post-do...
www.schornacklab.net
www.cam.ac.uk/jobs/post-do...
www.schornacklab.net
November 6, 2025 at 6:51 PM
Plz RP. Come join us at @slcuplants.bsky.social @cam.ac.uk to study effector-targeted plant processes impacting plant cell biology and development.
www.cam.ac.uk/jobs/post-do...
www.schornacklab.net
www.cam.ac.uk/jobs/post-do...
www.schornacklab.net
Reposted by Michael Seidl
Hungary 1956
'Well over a 100k people fled the country seeking asylum. Among them was a young geneticist named George Rédei, who headed for the Austrian border with a small vial of seeds tucked in his pocket.
The seeds belonged to a spindly weed in the mustard family called Arabidopsis thaliana.'
'Well over a 100k people fled the country seeking asylum. Among them was a young geneticist named George Rédei, who headed for the Austrian border with a small vial of seeds tucked in his pocket.
The seeds belonged to a spindly weed in the mustard family called Arabidopsis thaliana.'
How a humble weed became a superstar of biology
Arabidopsis thaliana was always an unlikely candidate for the limelight. But 25 years ago, the diminutive thale cress launched the botanical world into the molecular era.
knowablemagazine.org
November 6, 2025 at 8:47 AM
Hungary 1956
'Well over a 100k people fled the country seeking asylum. Among them was a young geneticist named George Rédei, who headed for the Austrian border with a small vial of seeds tucked in his pocket.
The seeds belonged to a spindly weed in the mustard family called Arabidopsis thaliana.'
'Well over a 100k people fled the country seeking asylum. Among them was a young geneticist named George Rédei, who headed for the Austrian border with a small vial of seeds tucked in his pocket.
The seeds belonged to a spindly weed in the mustard family called Arabidopsis thaliana.'
Reposted by Michael Seidl
Very happy to see this nice piece of work online, led by superstar postdoc Mariana Tarallo. A great collaboration between the teams at @bioprotection.bsky.social/Massey University and the James Hutton Institute!
PaRXLR40, a broad cell death suppressor of the kauri dieback pathogen Phytophthora agathidicida, targets a plant ARM/BTB domain-containing protein https://www.biorxiv.org/content/10.1101/2025.11.05.686655v1
November 7, 2025 at 9:12 AM
Very happy to see this nice piece of work online, led by superstar postdoc Mariana Tarallo. A great collaboration between the teams at @bioprotection.bsky.social/Massey University and the James Hutton Institute!
Reposted by Michael Seidl
📢 Open Call! The Max Perutz Labs invite applications for a Tenure-Track Professorship in Genome Biology. We are particularly interested in researchers investigating the molecular and biophysical mechanisms underlying genome function and regulation. More details ➡️ tinyurl.com/3t7vvdct
November 5, 2025 at 10:59 AM
📢 Open Call! The Max Perutz Labs invite applications for a Tenure-Track Professorship in Genome Biology. We are particularly interested in researchers investigating the molecular and biophysical mechanisms underlying genome function and regulation. More details ➡️ tinyurl.com/3t7vvdct
Reposted by Michael Seidl
SWBio DTP PhD (Univ Exeter): Will global warming speed up antifungal resistance? Work with Prof Gabriel Yvon-Durocher, Prof Neil Gow & team. Experimental evolution, multi-omics & modelling on medical/crop pathogens. Apply: bpb-eu-w2.wpmucdn.com/blogs.bristo... #PhD #AMR #ClimateChange #Mycology
November 5, 2025 at 11:40 AM
SWBio DTP PhD (Univ Exeter): Will global warming speed up antifungal resistance? Work with Prof Gabriel Yvon-Durocher, Prof Neil Gow & team. Experimental evolution, multi-omics & modelling on medical/crop pathogens. Apply: bpb-eu-w2.wpmucdn.com/blogs.bristo... #PhD #AMR #ClimateChange #Mycology
Reposted by Michael Seidl
Combating #wheat leaf #rust: Advances in genetic resistance and sustainable management strategies doi.org/10.1016/j.pm...
November 4, 2025 at 8:49 PM
Combating #wheat leaf #rust: Advances in genetic resistance and sustainable management strategies doi.org/10.1016/j.pm...
Reposted by Michael Seidl
The full list of instructors is available in this flyer.
Registration closes on November 15th - register today to secure your spot!
bsky.app/profile/jlst...
Registration closes on November 15th - register today to secure your spot!
bsky.app/profile/jlst...
November 4, 2025 at 5:09 PM
The full list of instructors is available in this flyer.
Registration closes on November 15th - register today to secure your spot!
bsky.app/profile/jlst...
Registration closes on November 15th - register today to secure your spot!
bsky.app/profile/jlst...
Reposted by Michael Seidl
Bernabeu, @microbiobits.bsky.social and @tonigabaldon.bsky.social use simulations to test for the robustness of inferred relative timings of gene transfers in the lineage leading to the ancestor of eukaryotes
🔗 doi.org/10.1093/gbe/evaf190
#genome #evolution
🔗 doi.org/10.1093/gbe/evaf190
#genome #evolution
Phylogeny-aware Simulations Suggest a Low Impact of Unsampled Lineages in the Inference of Gene Flow During Eukaryogenesis
Abstract. The topologies of gene trees are broadly used to infer horizontal gene transfer events and characterize the potential donor and acceptor partners
doi.org
November 3, 2025 at 4:23 PM
Bernabeu, @microbiobits.bsky.social and @tonigabaldon.bsky.social use simulations to test for the robustness of inferred relative timings of gene transfers in the lineage leading to the ancestor of eukaryotes
🔗 doi.org/10.1093/gbe/evaf190
#genome #evolution
🔗 doi.org/10.1093/gbe/evaf190
#genome #evolution
Reposted by Michael Seidl
Thrilled to share our latest review on receptor kinase processing in plants! 🌱
Huge congratulations to @adithya1972.bsky.social and Anna for leading this work, and a big thank you to our fantastic collaborator Martina-Ried Lasi for making this a truly rewarding team effort!
Huge congratulations to @adithya1972.bsky.social and Anna for leading this work, and a big thank you to our fantastic collaborator Martina-Ried Lasi for making this a truly rewarding team effort!
Shedding light on receptor kinase processing
journals.plos.org
November 4, 2025 at 8:25 AM
Thrilled to share our latest review on receptor kinase processing in plants! 🌱
Huge congratulations to @adithya1972.bsky.social and Anna for leading this work, and a big thank you to our fantastic collaborator Martina-Ried Lasi for making this a truly rewarding team effort!
Huge congratulations to @adithya1972.bsky.social and Anna for leading this work, and a big thank you to our fantastic collaborator Martina-Ried Lasi for making this a truly rewarding team effort!
Reposted by Michael Seidl
NEW Publication🥳
Rapid #evolution is thought to be disadvantageous due to the accumulation of deleterious #mutations. We identify multiple lineages of rapidly evolving and stable #yeast that are many millions of years old
🔗: academic.oup.com/mbe/advance-...
Rapid #evolution is thought to be disadvantageous due to the accumulation of deleterious #mutations. We identify multiple lineages of rapidly evolving and stable #yeast that are many millions of years old
🔗: academic.oup.com/mbe/advance-...
November 3, 2025 at 6:29 PM
NEW Publication🥳
Rapid #evolution is thought to be disadvantageous due to the accumulation of deleterious #mutations. We identify multiple lineages of rapidly evolving and stable #yeast that are many millions of years old
🔗: academic.oup.com/mbe/advance-...
Rapid #evolution is thought to be disadvantageous due to the accumulation of deleterious #mutations. We identify multiple lineages of rapidly evolving and stable #yeast that are many millions of years old
🔗: academic.oup.com/mbe/advance-...
Reposted by Michael Seidl
We wrote a review 📖 on hydathode immunity! Learn how bacteria exploit hydathodes to access the vasculature and open questions for future research.
📣 If you are curious about this topic, please consider applying for two open positions in my lab (until Nov23)! www.sciencedirect.com/science/arti...
📣 If you are curious about this topic, please consider applying for two open positions in my lab (until Nov23)! www.sciencedirect.com/science/arti...
Hydathodes at the forefront of plant immunity against vascular pathogens
Hydathodes are tiny plant organs that form an interface between the leaf surface and xylem vasculature. They facilitate excretion of xylem fluid under…
www.sciencedirect.com
November 4, 2025 at 10:43 AM
We wrote a review 📖 on hydathode immunity! Learn how bacteria exploit hydathodes to access the vasculature and open questions for future research.
📣 If you are curious about this topic, please consider applying for two open positions in my lab (until Nov23)! www.sciencedirect.com/science/arti...
📣 If you are curious about this topic, please consider applying for two open positions in my lab (until Nov23)! www.sciencedirect.com/science/arti...
Reposted by Michael Seidl
Open position at the Swiss Institute of Bioinformatics:
We are looking for a Director of the Center of Pathogen Bioinformatics
apply.refline.ch/499599/0346/...
I am in the Center's steering board together with fantastic colleagues (Emma Hodcroft @firefoxx66.bsky.social, Richard Neher @neher.io, and
We are looking for a Director of the Center of Pathogen Bioinformatics
apply.refline.ch/499599/0346/...
I am in the Center's steering board together with fantastic colleagues (Emma Hodcroft @firefoxx66.bsky.social, Richard Neher @neher.io, and
Director, Center for Pathogen Bioinformatics
The Centre for Pathogen Bioinformatics (CPB) is a unit of SIB which offers expertise and services in pathogen bioinformatics, computational molecular epidemiology and related multi-site project manage...
apply.refline.ch
October 25, 2025 at 1:03 PM
Open position at the Swiss Institute of Bioinformatics:
We are looking for a Director of the Center of Pathogen Bioinformatics
apply.refline.ch/499599/0346/...
I am in the Center's steering board together with fantastic colleagues (Emma Hodcroft @firefoxx66.bsky.social, Richard Neher @neher.io, and
We are looking for a Director of the Center of Pathogen Bioinformatics
apply.refline.ch/499599/0346/...
I am in the Center's steering board together with fantastic colleagues (Emma Hodcroft @firefoxx66.bsky.social, Richard Neher @neher.io, and
Reposted by Michael Seidl
Registration is now open for SMBE 2026!
Head over to the registration page to find all the details and secure your spot 🏃♀️
📝 smbe2026.org/registration
🐦 Early-bird deadline: March 31, 2026
If you are an active member of the SMBE you can register for the meeting with discounts.
#SMBE2026
Head over to the registration page to find all the details and secure your spot 🏃♀️
📝 smbe2026.org/registration
🐦 Early-bird deadline: March 31, 2026
If you are an active member of the SMBE you can register for the meeting with discounts.
#SMBE2026
November 3, 2025 at 11:05 AM
Registration is now open for SMBE 2026!
Head over to the registration page to find all the details and secure your spot 🏃♀️
📝 smbe2026.org/registration
🐦 Early-bird deadline: March 31, 2026
If you are an active member of the SMBE you can register for the meeting with discounts.
#SMBE2026
Head over to the registration page to find all the details and secure your spot 🏃♀️
📝 smbe2026.org/registration
🐦 Early-bird deadline: March 31, 2026
If you are an active member of the SMBE you can register for the meeting with discounts.
#SMBE2026