Ieva Drulyte
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ievadr.bsky.social
Ieva Drulyte
@ievadr.bsky.social
1.2K followers 350 following 340 posts
Structural biologist | CryoCloud 🔬☁️ | Posts about #cryoEM, some running and cats | Views my own | She/her
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Excited to share that our book chapter on #cryoEM epitope mapping, co‑written with my favourite collaborator @danielhurdiss.bsky.social, is now out! 🔬

It captures learnings from many biologics projects & we hope it’s a useful resource for structural immunologists!

link.springer.com/protocol/10....
Reposted by Ieva Drulyte
😬
Yikes! In this paper the AlphaFold model of human plasminogen (PDB-8uq6) has been refined into noise (EMD-42462) using Phenix & ISOLDE. For some reason the authors even interpret side-chain interactions:
#cryoEM
Reposted by Ieva Drulyte
Yikes! In this paper the AlphaFold model of human plasminogen (PDB-8uq6) has been refined into noise (EMD-42462) using Phenix & ISOLDE. For some reason the authors even interpret side-chain interactions:
#cryoEM
Reposted by Ieva Drulyte
✨Excited that the main project of my PhD is now available as a pre-print on #bioRxiv

Here, we used #CryoET to visualise mitochondrial proteostatic stress and together with SPA #CryoEM shed light into the functional cycle of the Hsp60:10 chaperone system. #TeamTomo

🔗 www.biorxiv.org/content/10.1...
Reposted by Ieva Drulyte
Initial attempt at replicating in relion (parameters in next post). This is for Aca2-RNA, using a 100k subset of the 2D-classified particles (no prior 3D cleanup).

A 1-class ab initio in relion, then local refinement in relion (1.8deg searches+blush) gives a nominally 3.3Å map; 3.5 Å w/out blush.
Reposted by Ieva Drulyte
📣 Live from the Dutch Structural Biology Meeting in Delft! Robert (@riborob.bsky.social) is presenting our CryoCloud poster on accelerating #cryoEM workflows. We’re also sponsoring the Poster Prize 🧦🎉 Big thanks to Arjen Jakobi (@cryotud.bsky.social) for organising. Excited for today’s discussions!
Reposted by Ieva Drulyte
September Map of the Month: Small Data, Big Insights ⚡️

From just 233 movies, CryoCloud delivered a 3.2 Å SARS-CoV-2 spike map in 3.5 h.

Fast and efficient #cryoEM, exactly what vaccine design teams need when screening dozens of antigen variants per day.

📬 DM or [email protected] for more info!
Reposted by Ieva Drulyte
Coming up next week: the third Dutch Structural Biology meeting! Now in Delft, on Sept 26. See program here: nvbmb.kncv.nl/biology-2025 with #teamtomo #cryoEM #nmrchat simulations and more (looks like)

Organized by the #NVBMB (associated with KNCV)
Dutch Structural Biology Meeting 2025 - NVBMB
nvbmb.kncv.nl
So happy to have you on board, @jbrwhite.bsky.social!
Thrilled to welcome Dr Joshua White as Senior Application Scientist at CryoCloud! With deep expertise in single-particle analysis & end-to-end #cryoEM workflows, Josh will lead data analysis, user training & support. Excited to have his experience & energy on board! 🚀

@jbrwhite.bsky.social
A few snaps from @cryocloudio.bsky.social retreat in the Belgian Ardennes 📸🌿

We mixed focused work sessions with walks and shared meals, late-night Jenga battles, and plenty of time socialising. We even spotted deer in the garden 🦌

And yes, we also launched our own #cryoEM socks!
Reposted by Ieva Drulyte
The CryoCloud team just returned from a retreat in the Belgian Ardennes 🌿 For the first time, all 11 of us met in person, with colleagues from 6 countries. We had work sessions, walks, meals, spotted deer 🦌 … and launched our first edition of CryoCloud #cryoEM socks! 🚀
Reposted by Ieva Drulyte
August Map of the Month: Epitope Mapping edition!

We reprocessed EMD-19016 and got a 2.7 Å map of PDCoV RBD in complex with two neutralising Fabs ✨

📊 4,736 movies
⚡️ 35.5 h cloud compute
🔬 2.7 Å map from 120k particles (0.3 Å better than published)

📬 DM or [email protected] for more info!

#CryoEM
Reposted by Ieva Drulyte
Best thing is to come back from ⛰️vacation☀️ to find a manuscript has metamorphosed into a published paper, so..

🚀 Check out our paper on hormone import⏬ into plant cells in @natplants.nature.com 🌱👇

www.nature.com/articles/s41...
Reposted by Ieva Drulyte
🚨 We’re hiring! 🚨

We’re looking for a Correlative Imaging Scientist to join our EM team at ABSL!

You will be developing and supporting cryo-EM & cryo-CLEM workflows across multiple imaging platforms (FIB-SEM, cryo-confocal, cryo-EM).

Any questions? Get in touch!

jobs.leeds.ac.uk/Vacancy.aspx...
Job Opportunity at University of Leeds: Correlative Imaging Scientist
Are you a creative postdoctoral-scientist keen to explore novel in-situ biology with cryogenic electron tomography? Do you have a background in imaging technologies and/or image processing?We are look...
jobs.leeds.ac.uk
Reposted by Ieva Drulyte
Not my area at all, but how cool are these cryoEM structures of purely RNA-based assemblies!
www.nature.com/articles/s41...
Reposted by Ieva Drulyte
Nice cover showing cryo-EM derived structures of p53 binding to nucleosomes. Great work from the Thoma lab:
www.cell.com/molecular-ce...
Reposted by Ieva Drulyte
🔐 Cloud Security Part 2

In this second post of our security FAQ series, we are digging into what happens behind the scenes to keep your data safe every single day.

➡️ Click through to learn more about how we manage access, monitor activity, and keep your data safe.

#CloudSecurity #CryoEM
Reposted by Ieva Drulyte
New preprint: In situ Architecture of #Plasmodesmata.

Using #cryoET, #AlphaFold & proteomics, we uncover the native organization of plant intercellular nanopores.

🔗 doi.org/10.1101/2025...

🧪🧵1/n
#teamtomo #PlantScience #Physcomitrium #Arabidopsis #cryoEM
Reposted by Ieva Drulyte
🔐 Cloud Security Part 1

We often get asked about cloud security – and rightly so.

In this three-part series, we’re addressing the most common questions we hear from customers.

➡️ Click through to find out how we protect your data with end-to-end encryption and built-in redundancy.

#Cloud #CryoEM
Reposted by Ieva Drulyte
I am excited to share our latest preprint presenting the structure of human NHE6, a key endosomal Na⁺/H⁺ exchanger involved in Christianson syndrome.

We bring together #cryo-EM, NMR, SAXS, lipidomics, and functional assays for an integrative analysis of NHE6 architecture, function, and regulation.
Reposted by Ieva Drulyte
Our publication in Science Advances!
Structural dynamics of a calcium transporter revealed by time-resolved X-ray scattering and cryo-EM in lipid nanodiscs. #CryoEM #membraneprotein #nanodisc #StructuralBiology

www.science.org/doi/10.1126/...