Shicheng Guo
shihcheng.bsky.social
Shicheng Guo
@shihcheng.bsky.social
Senior Director, Translational Genetics and Data Science, Translational Medicine | Data Science | Computational Biology | Drug Discovery | Passionate about advancing genomics and biobank research through collaboration. Opinions are my own!
Community-engaged research bridges #neurology research and practice, speeding up findings for impact. PMID:41182739, JAMA Neurol 2025, @JAMANeuro https://doi.org/10.1001/jamaneurol.2025.4224 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
https://doi.org/10.1001/jamaneurol.2025.4224
No description available
doi.org
November 28, 2025 at 7:10 AM
Receptor tyrosine kinases directly regulate RNA polymerase II in the nucleus, linking cell signaling to gene transcription. Fascinating! PMID:41196973, Science 2025, @ScienceMagazine https://doi.org/10.1126/science.aec1434 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
https://doi.org/10.1126/science.aec1434
No description available
doi.org
November 28, 2025 at 4:10 AM
Unlock growth control! Targeting the Hippo pathway: Aiming at YAP/TAZ disrupts cancer proliferation. 🚀 #CancerResearch PMID:40588515, Nat Rev Drug Discov 2025, @NatRevDrugDisc https://doi.org/10.1038/s41573-025-01234-0 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
Targeting the Hippo pathway in cancer | Nature Reviews Drug Discovery
The Hippo pathway is a highly conserved signalling network that controls tissue growth and cell fate, responding to physical properties of the tissue microenvironment and cell biological features such as adhesion and polarity. Hippo signalling perturbation is associated with several human diseases, particularly various solid cancers. Hippo pathway-targeted therapies are beginning to emerge for the treatment of cancer, most of which are focused on disrupting the ability of the YAP and TAZ transcription co-activator proteins to promote transcription of genes with their cognate TEAD1–4 DNA binding proteins. Recently, TEAD inhibitors have shown promise in a phase I clinical trial in cancers that are enriched for Hippo pathway mutations, such as mesothelioma. Moreover, Hippo pathway-targeted therapies have great potential to be combined with RAS–MAPK pathway inhibitors, given the close functional relationship that these signalling pathways share in development and disease. The Hippo si
doi.org
November 28, 2025 at 3:10 AM
CRISPR therapies could transform disease treatment but off-target risks remain. Precision in targeting is essential to balance risks. PMID:41286106, Nat Genet 2025, @NatureGenet @OTSociety @NAR_Open https://doi.org/10.1038/s41588-025-02428-3 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
Measurement and clinical interpretation of CRISPR off-targets | Nature Genetics
CRISPR genetic therapies are revolutionizing the landscape of preclinical research and clinical studies, providing new potential routes for curative intervention for a range of previously untreatable diseases. As with any therapy, the therapeutic benefits and risks must be weighed against consideration of the disease threat. Genome-related adverse events are an inherent risk of CRISPR genetic therapies, including off-target edits. The perception that CRISPR therapies ought to have near-zero off-targets belies clinical medicine, therapy development and biology, which demonstrate that ‘perfect’ therapeutics do not exist. Given that not all genomic off-target events are equal, we provide a practical framework to evaluate and assess off-target safety based on the tools available today and ones that will be developed in the future. With the comprehensive information and assessment gathered using these guidelines, we aim to streamline the transition of CRISPR therapeutics from bench to bedsi
doi.org
November 28, 2025 at 2:10 AM
A human antibody shows potent neutralization of Marburg virus, with enhanced glycoprotein mutations improving expression, stability, and immune response. PMID:41225006, Nature 2025, @Nature https://doi.org/10.1038/s41586-025-09868-1 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
Potent neutralization of Marburg virus by a vaccine-elicited antibody | Nature
Marburg virus (MARV) is a filovirus that causes a severe and often lethal hemorrhagic fever1,2. Despite the increasing frequency of MARV outbreaks, no vaccines or therapeutics are licensed for use in humans. Here, we designed mutations that improve the expression, thermostability, and immunogenicity of the prefusion MARV glycoprotein (GP) ectodomain trimer, which is the sole target of neutralizing antibodies and vaccines in development3–8. We discovered a fully human, pan-marburgvirus monoclonal antibody, MARV16, that broadly neutralizes all MARV isolates as well as Ravn virus and Dehong virus with 40 to 100-fold increased potency relative to previously described antibodies9. Moreover, MARV16 provides therapeutic protection in guinea pigs challenged with MARV. We determined a cryo-electron microscopy structure of MARV16-bound MARV GP showing that MARV16 recognizes a prefusion-specific epitope spanning GP1 and GP2, blocking receptor binding and preventing conformational changes required
doi.org
November 28, 2025 at 1:10 AM
Ten-year study on breast cancer (pT1N1, pT2N1, pT3N0, or pT2N0/grade 3) found postmastectomy irradiation’s role in survival is uncertain. PMID:41191939, N Engl J Med 2025, @NEJM https://doi.org/10.1056/NEJMoa2412225 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
https://doi.org/10.1056/NEJMoa2412225
No description available
doi.org
November 27, 2025 at 12:10 PM
PIEZO1/2 channels are pivotal in labor: deleting them in mice weakens contractions & causes major birthing issues. Insights on parturition! PMID:41231991, Science 2025, @ScienceMagazine https://doi.org/10.1126/science.ady3045 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
https://doi.org/10.1126/science.ady3045
No description available
doi.org
November 27, 2025 at 6:10 AM
Alopecia areata: autoimmune hair loss affecting ~2% lifetime, impacting life quality. Varies from patches to full loss. PMID:41198704, Nat Rev Dis Primers 2025, @DiseasePrimers https://doi.org/10.1038/s41572-025-00664-9 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
Alopecia areata | Nature Reviews Disease Primers
Alopecia areata is a common cause of non-scaring autoimmune hair loss, associated with substantial psychosocial burden. Alopecia areata is an autoimmune disease in which loss of immune privilege in hair follicles leads to local hair follicle-associated inflammation. A chronic disease with uncertain course that is estimated to affect 2% of people over their lifetime, alopecia areata can present with a range of clinical features, from a single small round patch of hair loss to full scalp and body hair loss, and is associated with atopic, autoimmune and psychological comorbidities. Alopecia areata also has a major negative impact on quality of life, with a greater mental burden than physical burden. Since the 2010s, advances in understanding of disease pathogenesis have led to the identification of inflammatory pathways that can be successfully inhibited to produce substantial clinical responses. The therapeutic landscape has been transformed, with FDA approval of the first treatment for
doi.org
November 27, 2025 at 5:10 AM
Wishing everyone a wonderful holiday season! I’m grateful for your support this year and excited to apply for an ASHG 2026 committee role. In 2026, I’ll keep sharing key genomics insights, RNA advances, and opportunities to collaborate. Thanks for being here! Please show your support! Thanks.
November 27, 2025 at 3:56 AM
Ketogenic diets linked to mood. Analysis of 18 studies (n=1500) suggests potential in reducing depression and anxiety symptoms. PMID:41191382, JAMA Psychiatry 2025, @JAMAPsych https://doi.org/10.1001/jamapsychiatry.2025.3261 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
https://doi.org/10.1001/jamapsychiatry.2025.3261
No description available
doi.org
November 27, 2025 at 3:10 AM
New CPIC framework standardizes assigning clinical function to pharmacogene alleles for better prescribing decisions. #PharmGenetics PMID:41175864, Am J Hum Genet 2025, @AJHGNews https://www.cell.com/ajhg/fulltext/S0002-9297(25)00395-7 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
https://www.cell.com/ajhg/fulltext/S0002-9297(25)00395-7
No description available
www.cell.com
November 26, 2025 at 12:10 PM
🚀 New JAMA study: Over 40 AI-enhanced dermatology apps analyzed! 🌐 While downloads soar, efficacy remains unclear. 📱 #DermTechInsight PMID:38452263, JAMA Dermatol 2024 @hub_xchange https://doi.org/10.1001/jamadermatol.2024.0468 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
https://doi.org/10.1001/jamadermatol.2024.0468
No description available
doi.org
November 26, 2025 at 5:10 AM
Identified 251 pQTLs in 3,707 Greenlandic Inuits linking 177 proteins to cardiometabolic disease. Key for future studies! #Genetics PMID:41232531, Am J Hum Genet 2025, @AJHGNews https://www.cell.com/ajhg/fulltext/S0002-9297(25)00404-5 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
https://www.cell.com/ajhg/fulltext/S0002-9297(25)00404-5
No description available
www.cell.com
November 26, 2025 at 3:10 AM
A phase 3 trial shows that a quadrivalent modRNA flu vaccine is efficacious and safe for adults aged 18-64, comparable to existing vaccines. PMID:41259756, N Engl J Med 2025, @NEJM https://doi.org/10.1056/NEJMoa2416779 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
https://doi.org/10.1056/NEJMoa2416779
No description available
doi.org
November 26, 2025 at 2:10 AM
Belzutifan, a HIF-2α inhibitor, showed promise in a phase 2 trial with 72 patients with advanced pheochromocytoma or paraganglioma. PMID:41124218, N Engl J Med 2025, @NEJM https://doi.org/10.1056/NEJMoa2504964 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
https://doi.org/10.1056/NEJMoa2504964
No description available
doi.org
November 25, 2025 at 1:10 PM
Activity-based co-selection enriches high-efficiency base editors, enhancing CRISPR's precision. Reduces noise for clearer insights. PMID:41087678, Nat Genet 2025, @NatureGenet @OTSociety @NAR_Open https://doi.org/10.1038/s41588-025-02366-0 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
Activity-based selection for enhanced base editor mutational scanning | Nature Genetics
Base editing is a CRISPR-based technology that enables high-throughput, nucleotide-level functional interrogation of the genome that is essential for understanding the genetic basis of human disease and informing therapeutic development. Base editing screens have emerged as a powerful experimental approach, yet significant cell-to-cell variability in editing efficiency introduces noise that may obscure meaningful results. Here we develop a co-selection method that enriches for cells with high base editing activity, substantially increasing editing efficiency at a target locus. We evaluate this activity-based selection method against a traditional screening approach by tiling guide RNAs across TP53, demonstrating its enhanced capacity to pinpoint specific mutations and protein regions of functional importance. We anticipate that this modular selection method will enhance the resolution of base editing screens across many applications. This study presents a splice-based selection method
doi.org
November 25, 2025 at 9:10 AM
IVIG's anti-inflammatory effects boost when IgG's glycan engages with Fc receptors FcγRIIB & DC-SIGN. Key in autoimmune care! PMID:41197001, Science 2025, @ScienceMagazine https://doi.org/10.1126/science.adv2927 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
https://doi.org/10.1126/science.adv2927
No description available
doi.org
November 25, 2025 at 7:10 AM
A cluster-randomized trial on APT-Sepsis intervention showed promise in reducing maternal infection and sepsis complications globally. PMID:41259754, N Engl J Med 2025, @NEJM https://doi.org/10.1056/NEJMoa2512698 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
https://doi.org/10.1056/NEJMoa2512698
No description available
doi.org
November 25, 2025 at 5:10 AM
Optogenetics revolutionizes neuroscience: unlocks brain insights, enhances cognition therapies. #NeuroscienceRevolution PMID:41254285, Nat Neurosci 2025, @NatureNeuro @Stanford https://doi.org/10.1038/s41593-025-02097-9 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
Roadmap for direct and indirect translation of optogenetics into discoveries and therapies for humans | Nature Neuroscience
Optogenetics has transformed basic research on neural circuitry, led to diverse experimental insights into human brain function and dysfunction, and opened pathways for clinical translation based on new understanding of how specific cell types contribute to cognition and behavior. Many of these translational pathways do not rely on the direct application of optogenetics in humans, but rather develop and advance other treatment modalities by leveraging causal knowledge derived from optogenetic circuit neuroscience. However, a recent proof-of-principle study—showing that optogenetics applied directly to the human central nervous system can treat blindness—underscores not only the curative potential but also the need for careful ethical consideration in the extension of direct optogenetic intervention to other disorders. Here, we review relevant considerations—including the selection of clinical indications, identification of molecular and optical strategies for specificity, and navigatio
doi.org
November 25, 2025 at 4:10 AM
Discover scMOVIR: the database integrating 320+ single-cell multi-omics datasets of 20+ viruses to decode human immune responses! PMID:41231764, Nucleic Acids Res 2025, @NAR_Open https://doi.org/10.1093/nar/gkaf1153 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
https://doi.org/10.1093/nar/gkaf1153
No description available
doi.org
November 25, 2025 at 2:10 AM
Explore the 2025 update of AFDB: streamlined interface & enhanced coverage with high-accuracy predictions. Overhaul in protein research! PMID:41273079, Nucleic Acids Res 2025, @NAR_Open https://doi.org/10.1093/nar/gkaf1226 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
https://doi.org/10.1093/nar/gkaf1226
No description available
doi.org
November 24, 2025 at 1:10 PM
Study deciphers direct motor cortex influence on limb muscles in mice during climbing, revealing distinct 1° control by forelimb area. PMID:41198898, Nat Neurosci 2025, @NatureNeuro https://doi.org/10.1038/s41593-025-02093-z #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
Selective direct influence of motor cortex on limb muscle activity during naturalistic climbing in mice | Nature Neuroscience
When and how motor cortical output directly influences limb muscle activity through descending projections remain poorly resolved, impeding a mechanistic understanding of motor control. Here we addressed this in mice performing an ethologically inspired climbing behavior. We quantified the direct influence of forelimb primary motor cortex (caudal forelimb area) on muscles across the muscle activity states expressed during climbing. We found that the caudal forelimb area instructs muscle activity pattern by selectively activating certain muscles, while less frequently activating or suppressing their antagonists. From Neuropixels recordings, we identified linear combinations (components) of motor cortical activity that covary with these effects. These components differ partially from those that covary with muscle activity and differ almost completely from those that covary with kinematics. Collectively, our results reveal an instructive direct motor cortical influence on limb muscles tha
doi.org
November 24, 2025 at 10:10 AM
Phase 3 trial: Atacicept, a TACI-Fc protein, aims to slow IgA nephropathy—a kidney disorder affecting >50% of patients in 10-20 years. #IgANephropathy PMID:41196369, N Engl J Med 2025, @NEJM @Stanford https://doi.org/10.1056/NEJMoa2510198 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
https://doi.org/10.1056/NEJMoa2510198
No description available
doi.org
November 24, 2025 at 9:10 AM
Discover HapScoreDB: scores for haplotype-resolved protein sequences from 1000s of human transcript isoforms. Decode variants easily! 🧬 PMID:41261743, Nucleic Acids Res 2025, @NAR_Open https://doi.org/10.1093/nar/gkaf1184 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
https://doi.org/10.1093/nar/gkaf1184
No description available
doi.org
November 24, 2025 at 6:10 AM