Irfan Prabudiansyah
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iprabudiansyah.bsky.social
Irfan Prabudiansyah
@iprabudiansyah.bsky.social
21 followers 81 following 1 posts
Scientist @univ-amu.fr ๐Ÿ‡ซ๐Ÿ‡ท | PhD @rug.nl ๐Ÿ‡ณ๐Ÿ‡ฑ | #StructuralBiologist #MembraneProteins #Nanodiscs #CryoEM ๐Ÿ”ฌโ„๏ธ๐Ÿ‘จโ€๐Ÿ”ฌ๐Ÿ‡ฎ๐Ÿ‡ฉ
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Our publication in Science Advances!
Structural dynamics of a calcium transporter revealed by time-resolved X-ray scattering and cryo-EM in lipid nanodiscs. #CryoEM #membraneprotein #nanodisc #StructuralBiology

www.science.org/doi/10.1126/...
Reposted by Irfan Prabudiansyah
๐Ÿ“„ New paper: 3DEM Structure Map Validation Recommendations

Two new metrics assess model-to-map fitness in cryo-EM:
๐Ÿ”น Q_relative_all โ†’ compares avg Q-score across PDB/EMDB
๐Ÿ”น Q_relative_resolution โ†’ compares within similar resolution

#3DEM #CryoEM #wwPDB
Reposted by Irfan Prabudiansyah
Flexibility can be frustrating when processing a #cryoEM dataset. If your target has a wobbly domain, check out our new case study on FaNaC1 for continuous heterogeneity tips in #CryoSPARC!

guide.cryosparc.com/processing-d...
Reposted by Irfan Prabudiansyah
ChimeraX daily builds can predict binding affinity of small molecules using Boltz 2 on your Mac, Windows or Linux computer. www.rbvi.ucsf.edu/chimerax/dat...
Reposted by Irfan Prabudiansyah
#CryoSPARC v4.7 is out! ๐Ÿš€ย 
Featuring a new automatic Micrograph Junk Detector that labels and rejects contaminants, new tools for curating subsets of particles, performance and stability fixes, and more!
Full changelog: cryosparc.com/updates

#cryoEM
Our publication in Science Advances!
Structural dynamics of a calcium transporter revealed by time-resolved X-ray scattering and cryo-EM in lipid nanodiscs. #CryoEM #membraneprotein #nanodisc #StructuralBiology

www.science.org/doi/10.1126/...