Daniel Hurdiss
@danielhurdiss.bsky.social
2.8K followers 1.4K following 820 posts
Assistant Professor at Utrecht University 🇳🇱 We use #cryoEM and molecular #virology techniques to study the infection mechanisms of +ssRNA viruses. https://www.uu.nl/medewerkers/DLHurdiss Views are my own.
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danielhurdiss.bsky.social
Latest preprint from the lab, many years in the making!

By combining #cryoEM with #AlphaFold3 modelling, we propose that norovirus NS3 forms a transmembrane RNA translocase.

This could have big implications for our understanding of viral replication & assembly (🧵)

www.biorxiv.org/content/10.1...
Reposted by Daniel Hurdiss
woutoosterheert.bsky.social
This is a perfect farewell to the @mpi-dortmund.bsky.social and the @raunser-lab.bsky.social. Big thanks to the whole team 😁.

Interested in doing equally exciting work? I have open positions available soon in my newly established lab at the @nkinl.bsky.social in Amsterdam.
Reposted by Daniel Hurdiss
woutoosterheert.bsky.social
Very excited that my final postdoctoral work is now online in Cell @cellpress.bsky.social.

www.sciencedirect.com/science/arti...

Using 16 (!) cryo-EM structures, we uncovered how the three proteins coronin, cofilin and AIP1 work together to rapidly disassemble actin filaments.
danielhurdiss.bsky.social
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allostericstate.bsky.social
Yikes! In this paper the AlphaFold model of human plasminogen (PDB-8uq6) has been refined into noise (EMD-42462) using Phenix & ISOLDE. For some reason the authors even interpret side-chain interactions:
#cryoEM
Image from the EMD entry EMD-42462 for human plasminogen bound to streptococcal surface enolase. Projections of the map are shown demonstrating no protein features and radial streaks due to overfitting. EMD-424262 and PDB-8UQ6 opened in ChimeraX. Though the map is stated to be of Human Plasminogen bound to streptococcal surface enolase the authors have modelled only plasminogen in their PDB. The map shows radial streak at the surface indicative of overfitting and no clear density in the centre of the map corresponds to the model. Figure 5 from the paper describing side chain interactions of human plasminogen from the PDB 8uq6. Image showing the model to map FSC curve from Phenix which is the software used by the authors to real space refine their PDB into their cryo-EM map. The model to map FSC curve is a flat line showing no correlation exists between the cryo-EM map EMD-42462 and the PDB 8uq6.
Reposted by Daniel Hurdiss
olibclarke.bsky.social
possibly stupid question - does anyone in #teamtomo or #cryoem recognize these little stacks (from EMPIAR-12549, U2OS cell lamellae)? The green circle is 300Å, and the spacing between the layers is ~50Å. The fourth, bell-shaped thing is something else, also not sure of that one..
Reposted by Daniel Hurdiss
cryoempapers.bsky.social
Structure and function of a pair of non-competing monoclonal antibodies against Langya henipavirus attachment glycoprotein pubmed.ncbi.nlm.nih.gov/41071677/ #cryoem
Reposted by Daniel Hurdiss
cryoempapers.bsky.social
Dipeptidase 1 is a functional receptor for a porcine coronavirus pubmed.ncbi.nlm.nih.gov/41073662/ #cryoem
Reposted by Daniel Hurdiss
gruberlab.bsky.social
How do SMC complexes load onto DNA to get ready for loop extrusion?

@roisnehamelinf.bsky.social & co discovered that Wadjet, an SMC complex involved in bacterial DNA immunity, performs some impressive molecular gymnastics 🤸‍♂️🤸‍♂️🤸‍♂️.

Check out the new paper: www.cell.com/molecular-ce...
Reposted by Daniel Hurdiss
pilhoferlab.bsky.social
🧐Checkout our preprint revealing the stepwise firing💥 mechanism of a Contractile Injection System @xujwet.bsky.social[email protected] trapped the complex by structure-guided engineering🧪 in multiple intermediate states and imaged them by multimodal #cryoEM❄️🔬
www.biorxiv.org/content/10.1...
Reposted by Daniel Hurdiss
denkenny.bsky.social
✨Excited that the main project of my PhD is now available as a pre-print on #bioRxiv

Here, we used #CryoET to visualise mitochondrial proteostatic stress and together with SPA #CryoEM shed light into the functional cycle of the Hsp60:10 chaperone system. #TeamTomo

🔗 www.biorxiv.org/content/10.1...
Reposted by Daniel Hurdiss
cryocloudio.bsky.social
CryoCloud is heading to Women in Electron Microscopy #WeM2025 this week!

We’re proud to sponsor this inaugural event supporting women in electron microscopy.

Our own @ievadr.bsky.social will speak on cloud-native automation to enable high-throughput #cryoEM for drug discovery.

See you there!
Reposted by Daniel Hurdiss
thijskuiken.bsky.social
Highly pathogenic avian influenza (HPAI) virus detected in a commercial poultry farm (71,000 broiler breeders) in the Netherlands (Gasselternijveenschemond, province Drenthe). All of them will be killed to try to stop the virus from spreading.
www.rijksoverheid.nl/actueel/nieu...
Vogelgriep vastgesteld in Gasselternijveenschemond
In Gasselternijveenschemond (gemeente Aa en Hunze, provincie Drenthe) is vogelgriep vastgesteld op een bedrijf met vleeskuikenouderdieren. Om verspreiding van het virus te voorkomen, worden de circa 7...
www.rijksoverheid.nl
Reposted by Daniel Hurdiss
daumlab.bsky.social
Out in Science Advances: Our #cryoEM structure of HFTV1, a virus infecting the halophile #archaea. *First full atomic structure (containing all structural proteins) of any tailed virus!* Congrats and thanks to all co-authors and our fantastic collaborators! www.science.org/doi/10.1126/...
Cryo-EM resolves the structure of the archaeal dsDNA virus HFTV1 from head to tail
This structure of an archaeal tailed virus (arTV) provides detailed insights into arTV assembly and infection mechanisms.
www.science.org
Reposted by Daniel Hurdiss
rcastellsg.bsky.social
We’re looking for an enthusiastic postdoc to join our team. 😊

The project focuses on protein design and cryo-EM applied to cancer research. 🔬🧪

The position is fully funded for 3 years.

Please share 🙏

Job description and application details (deadline: October 11th): www.cnio.es/en/empleo/po...
Postdoctoral Research Assistant for the Biomolecular Design and Structural Nanomedicine Group
DescriptionWe are looking for a Postdoctoral Researcher to join Roger Castells-Graells’ lab at the Spanish National Cancer Research Centre (CNIO). The successful candidate will work on innovative biom...
www.cnio.es
Reposted by Daniel Hurdiss
cryoempapers.bsky.social
Cryo-EM resolves the structure of the archaeal dsDNA virus HFTV1 from head to tail pubmed.ncbi.nlm.nih.gov/41042861/ #cryoem
Reposted by Daniel Hurdiss
joostsnijder.bsky.social
We’re hosting the MS+M conference in Utrecht today, lots of great talks ahead at the intersection of mass spec and microscopy. Here’s @hecklab.bsky.social kicking things off.
Reposted by Daniel Hurdiss
cryoempapers.bsky.social
Understanding the infection mechanism of {Phi}8 using infection method in Pseudomonas syringae pv. Phaseolicola strain: In-situ CryoET analysis www.biorxiv.org/content/10.1101/2025.09.29.678632v1 #cryoem
Reposted by Daniel Hurdiss
cryoempapers.bsky.social
Disulfide-constrained Fabs overcome target size limitation for high-resolution single particle cryoEM pubmed.ncbi.nlm.nih.gov/41027970/ #cryoem
Reposted by Daniel Hurdiss
cryoempapers.bsky.social
Cardiolipin dynamics promote membrane remodeling by mitochondrial OPA1 pubmed.ncbi.nlm.nih.gov/41027961/ #cryoem
Reposted by Daniel Hurdiss
cryoempapers.bsky.social
CXCR4 mediated recognition of HIV envelope spike and inhibition by CXCL12 pubmed.ncbi.nlm.nih.gov/41027939/ #cryoem
danielhurdiss.bsky.social
Rounding off an incredibly busy week with the excellent third installment of the Dutch Structural Biology Meeting! Many thanks to Arjen for the kind invitation to present our lab’s work.