Jaebeom Kim
@jbeom.bsky.social
Developing bioinformatics software in Steinegger lab. at Seoul National Univ.
Explore results with interactive visualization. 🧵3/5
- Generate customized Sankey plots.
- Search for taxa of interest.
- Filter by classified reads or proportion.
- Click taxon nodes for subtree views.
- Extract reads classified to a taxon.
- Access NCBI Taxonomy and genome browser.
- Generate customized Sankey plots.
- Search for taxa of interest.
- Filter by classified reads or proportion.
- Click taxon nodes for subtree views.
- Extract reads classified to a taxon.
- Access NCBI Taxonomy and genome browser.
October 16, 2025 at 7:29 AM
Explore results with interactive visualization. 🧵3/5
- Generate customized Sankey plots.
- Search for taxa of interest.
- Filter by classified reads or proportion.
- Click taxon nodes for subtree views.
- Extract reads classified to a taxon.
- Access NCBI Taxonomy and genome browser.
- Generate customized Sankey plots.
- Search for taxa of interest.
- Filter by classified reads or proportion.
- Click taxon nodes for subtree views.
- Extract reads classified to a taxon.
- Access NCBI Taxonomy and genome browser.
Easy and interactive taxonomic profiling with Metabuli App.
It integrates database curation, read QC, taxonomic profiling, and visualization right on your desktop.
No command line, server, or internet required.
Now published in Bioinformatics! 🧵1/5
doi.org/10.1093/bioi...
github.com/steineggerla...
It integrates database curation, read QC, taxonomic profiling, and visualization right on your desktop.
No command line, server, or internet required.
Now published in Bioinformatics! 🧵1/5
doi.org/10.1093/bioi...
github.com/steineggerla...
October 16, 2025 at 7:29 AM
Easy and interactive taxonomic profiling with Metabuli App.
It integrates database curation, read QC, taxonomic profiling, and visualization right on your desktop.
No command line, server, or internet required.
Now published in Bioinformatics! 🧵1/5
doi.org/10.1093/bioi...
github.com/steineggerla...
It integrates database curation, read QC, taxonomic profiling, and visualization right on your desktop.
No command line, server, or internet required.
Now published in Bioinformatics! 🧵1/5
doi.org/10.1093/bioi...
github.com/steineggerla...
🔍Explore results with interactive visualization.
- Generate customized Sankey plots.
- Search for taxa of interest.
- Filter by classified reads or proportion.
- Click taxon nodes for subtree views.
- Extract reads classified to a taxon.
- Access NCBI Taxonomy and genome browser. 🧵2/5
- Generate customized Sankey plots.
- Search for taxa of interest.
- Filter by classified reads or proportion.
- Click taxon nodes for subtree views.
- Extract reads classified to a taxon.
- Access NCBI Taxonomy and genome browser. 🧵2/5
March 13, 2025 at 8:51 AM
🔍Explore results with interactive visualization.
- Generate customized Sankey plots.
- Search for taxa of interest.
- Filter by classified reads or proportion.
- Click taxon nodes for subtree views.
- Extract reads classified to a taxon.
- Access NCBI Taxonomy and genome browser. 🧵2/5
- Generate customized Sankey plots.
- Search for taxa of interest.
- Filter by classified reads or proportion.
- Click taxon nodes for subtree views.
- Extract reads classified to a taxon.
- Access NCBI Taxonomy and genome browser. 🧵2/5
Metabuli App preprint is out!
💻Taxonomic classification & interactive visualization—right on your laptop
🛠️Create new databases or update existing ones with new sequences. 🧵1/5
github.com/steineggerla...
www.biorxiv.org/content/10.1101/2025.03.10.642298v1
💻Taxonomic classification & interactive visualization—right on your laptop
🛠️Create new databases or update existing ones with new sequences. 🧵1/5
github.com/steineggerla...
www.biorxiv.org/content/10.1101/2025.03.10.642298v1
March 13, 2025 at 8:51 AM
Metabuli App preprint is out!
💻Taxonomic classification & interactive visualization—right on your laptop
🛠️Create new databases or update existing ones with new sequences. 🧵1/5
github.com/steineggerla...
www.biorxiv.org/content/10.1101/2025.03.10.642298v1
💻Taxonomic classification & interactive visualization—right on your laptop
🛠️Create new databases or update existing ones with new sequences. 🧵1/5
github.com/steineggerla...
www.biorxiv.org/content/10.1101/2025.03.10.642298v1
🔍Explore results with interactive visualization.
- Generate customized Sankey plots.
- Search for taxa of interest.
- Filter by classified reads or proportion.
- Click taxon nodes for subtree views.
- Extract reads classified to a taxon.
- Access NCBI Taxonomy and genome browser.
- Generate customized Sankey plots.
- Search for taxa of interest.
- Filter by classified reads or proportion.
- Click taxon nodes for subtree views.
- Extract reads classified to a taxon.
- Access NCBI Taxonomy and genome browser.
March 13, 2025 at 8:34 AM
🔍Explore results with interactive visualization.
- Generate customized Sankey plots.
- Search for taxa of interest.
- Filter by classified reads or proportion.
- Click taxon nodes for subtree views.
- Extract reads classified to a taxon.
- Access NCBI Taxonomy and genome browser.
- Generate customized Sankey plots.
- Search for taxa of interest.
- Filter by classified reads or proportion.
- Click taxon nodes for subtree views.
- Extract reads classified to a taxon.
- Access NCBI Taxonomy and genome browser.
Easy taxonomic profiling with the Metabuli App! Explore your samples with publication-ready Sankey and Krona plots. We accelerated Metabuli further, classifying 2x22M reads vs. GTDB in just 43 min on a MacBook Pro M2. 🧵1/4
🚀https://github.com/steineggerlab/Metabuli-App
🚀https://github.com/steineggerlab/Metabuli-App
September 30, 2024 at 1:20 AM
Easy taxonomic profiling with the Metabuli App! Explore your samples with publication-ready Sankey and Krona plots. We accelerated Metabuli further, classifying 2x22M reads vs. GTDB in just 43 min on a MacBook Pro M2. 🧵1/4
🚀https://github.com/steineggerlab/Metabuli-App
🚀https://github.com/steineggerlab/Metabuli-App