Joe Rogers
@josephrogers.bsky.social
78 followers 98 following 3 posts
Cyclic peptide finder, protein folder, drug discoverer. Associate Prof. at University of Copenhagen.
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Reposted by Joe Rogers
New €94M research centre for protein design will open at the University of Copenhagen and be led by Dek Woolfson

Funded by the Novo Nordisk Foundation, the centre will operate across the Departments of Biology and & Drug Design and Pharmacology

novonordiskfonden.dk/en/news/new-...
New Danish research centre to make designed proteins with vast potential - Novo Nordisk Fonden
novonordiskfonden.dk
Reposted by Joe Rogers
In the nucleus, many intrinsically disordered proteins (IDPs) form condensates. What IDP sequence features drive this behavior? We developed CondenSeq, a high-throughput approach to measure nuclear condensate formation, and applied it to ~14,000 IDPs to find out!

rdcu.be/eq975
Characterizing protein sequence determinants of nuclear condensates by high-throughput pooled imaging with CondenSeq
Nature Methods - CondenSeq is an imaging-based, high-throughput platform for characterizing condensate formation within the nuclear environment, uncovering the protein sequence features that...
rdcu.be
Reposted by Joe Rogers
Small proteins can be more complex than they look!

We know proteins fluctuate between different conformations- but by how much? How does it vary from protein to protein? Can highly stable domains have low stability segments? @ajrferrari.bsky.social experimentally tested >5,000 domains to find out!
Reposted by Joe Rogers
A long-awaited nonopioid pain drug has won approval from the U.S. Food and Drug Administration (FDA) to treat moderate to severe short-term pain.
Nonopioid drug for acute pain wins FDA approval
Ongoing trials will reveal whether suzetrigine is also effective against chronic pain
scim.ag
Reposted by Joe Rogers
The variability across the 20 conformations in a typical NMR ensemble in the PDB represents the uncertainty from the lack of experimental data and not the dynamics of the protein in solution

Thanks for coming to my TED talk
Reposted by Joe Rogers
How to make a presentation? Don't save the best for last! Right from the start, describe your main question and a summary of your big idea. Everyone is listening at those first few minutes but they'll only continue to listen if you grab their attention.
Reposted by Joe Rogers
Reposted by Joe Rogers
Reposted by Joe Rogers
How do proteins mis-fold?

Paper led by Jacob Aunstrup from Alex Büll’s lab with MD simulations by Abigail Barclay, and key contributions from several others. We combined measurements of Φ-values with MD simulations to study the transition state for amyloid fibril growth

doi.org/10.1038/s415...
Figure from the paper that illustrates the approach of probing the transition state for amyloid growth by experiments and simulations
Reposted by Joe Rogers
🚨 Revolutionising Snakebite Treatments with AI-Designed Proteins 🐍

I'm proud to share our latest study published in hashtag#Nature, driven by Susana Vazquez Torres, and co-led by David Baker (Institute for Protein Design, University of Washington) and myself.
Reposted by Joe Rogers
PhD opportunities (yes, plural!)

We will launch a center of excellence “Plat-PATH” with @bjornppedersen.bsky.social this summer. We have an opening for some PhD students to work on plant hormone transporter mechanism.

- Details and application link: tinyurl.com/44hf9zkd
Please repost 💚
Structural and biophysical analysis of plant hormone transmembrane transport
tinyurl.com
Thanks also to @lindorfflarsen.bsky.social and @sobuelow.bsky.social for invaluable insights and simulations
Reposted by Joe Rogers
‼️Deadline 16th January 2025‼️Applications are open for the 2025 Experience Postgrad Life Sciences programme. Paid 8-week summer internships aimed to enhance diversity among life scientists of the future!! @cambridgebiosci.bsky.social @corpuscambridge.bsky.social www.exppg.lifesci.cam.ac.uk
Experience Postgrad Life Sciences | Enhancing diversity among life scientists of the future
www.exppg.lifesci.cam.ac.uk
Reposted by Joe Rogers
Proteome-scale quantification of the interactions driving condensate formation of intrinsically disordered proteins https://www.biorxiv.org/content/10.1101/2024.12.21.629870v1