Álvaro López Codina
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alcodina.bsky.social
Álvaro López Codina
@alcodina.bsky.social
Predoctoral Research Assistant at the Llorca lab @cniostopcancer.bsky.social working on mTORC1 signaling and cryo-EM ❄️🔬. Intrigued by the structural mechanisms of protein assemblies involved in endomembrane signaling and trafficking 🧪.
Reposted by Álvaro López Codina
OPUS-ET: Resolving Compositional and Conformational Heterogeneities of Biomolecules in Cryo-Electron Tomography www.biorxiv.org/content/10.1101/2025.11.21.688990v1 #cryoem
November 24, 2025 at 8:10 AM
Reposted by Álvaro López Codina
Functional Characterization of Hsp110 in Drosophila Reveals its Essential and Dosage-Sensitive Role in Nervous System Integrity

www.biorxiv.org/content/10.1...
Functional Characterization of Hsp110 in Drosophila Reveals its Essential and Dosage-Sensitive Role in Nervous System Integrity
The Hsp70 molecular chaperone system is the front line of defense in maintaining cellular proteostasis. In eukaryotes, ATP/ADP nucleotide exchange in the Hsp70 chaperone cycle is stimulated by Hsp110,...
www.biorxiv.org
November 24, 2025 at 8:31 AM
Reposted by Álvaro López Codina
A new probe illuminates endo-lysosomal Ca²⁺ measurements: a role for vesicular IP3 receptors? Anthony Morgan @ox.ac.uk highlights a new reporter for endo-lysosomal Ca²⁺ developed by Calvo et al. (rupress.org/jcb/article/...) in Spotlight: rupress.org/jcb/article/...

#CellSignaling
Direct measurements of luminal Ca2+ with endo-lysosomal GFP-aequorin reveal functional IP3 receptors
Calvo et al. describe a new bioluminescent sensor for measuring luminal Ca2+ in a mildly acidic subcompartment of the endo-lysosomal system. This Ca2+ stor
rupress.org
November 24, 2025 at 3:02 PM
Reposted by Álvaro López Codina
Nature research paper: Structural basis of regulated N-glycosylation at the secretory translocon

go.nature.com/49vhkr5
Structural basis of regulated N-glycosylation at the secretory translocon - Nature
The structural mechanism of a natively isolated GRP94 folding intermediate tethered to a CCDC134-bound translocon is described, revealing how the nascent chain remodels the translocon to control N-glycosylation by OST.
go.nature.com
November 24, 2025 at 3:39 PM
Reposted by Álvaro López Codina
New JCS snapshot - ARL13B-Cerulean rescues Arl13b-null mouse from embryonic lethality and reveals a role for ARL13B in spermatogenesis

Alyssa Long presents the key findings from their recent JCS paper with Tamara Caspary and colleagues.
#JCSciliaSI
journals.biologists.com/jcs/article/...
November 24, 2025 at 3:53 PM
Reposted by Álvaro López Codina
In @elife: Human dynein-dynactin is a fast processive motor in living cells doi.org/10.7554/eLif...
Human dynein-dynactin is a fast processive motor in living cells
doi.org
November 24, 2025 at 4:33 PM
Reposted by Álvaro López Codina
A partner switch from CDS2 to RAB1A redirects MBOAT7 to inhibit DGAT2-mediated lipid droplet growth www.biorxiv.org/content/10.1...
www.biorxiv.org
November 24, 2025 at 4:43 PM
Reposted by Álvaro López Codina
Apical and basolateral plasma membranes in epithelial cells have distinct lipidomes and biophysical properties www.biorxiv.org/content/10.1...
Apical and basolateral plasma membranes in epithelial cells have distinct lipidomes and biophysical properties
Epithelial cell polarization is essential for many physiological processes, including tissue morphogenesis, nutrient absorption, barrier integrity, and directional secretion. A defining feature of suc...
www.biorxiv.org
November 24, 2025 at 4:45 PM
Reposted by Álvaro López Codina
Optogenetic control of mechanotransduction based on light-induced homodimerization of talin url: journals.biologists.com/jcs/article-...
Optogenetic control of mechanotransduction based on light-induced homodimerization of talin
Integrin-based adhesion complexes serve as primary sites for actomyosin force transmission to the extracellular matrix, providing traction that drives cell mechanical responses including adhesion, mig...
journals.biologists.com
November 24, 2025 at 4:49 PM
Reposted by Álvaro López Codina
Kinesin-1-driven microtubule sliding helps pancreatic β cells reorganise their cytoskeleton in response to glucose.
buff.ly/r3BlzFj
November 23, 2025 at 11:28 PM
Reposted by Álvaro López Codina
The Ies6 subunit is essential for INO80-mediated nucleosome organization https://www.biorxiv.org/content/10.1101/2025.11.21.689789v1
November 24, 2025 at 2:18 AM
Reposted by Álvaro López Codina
ZAKα is a sensor of mRNA stasis at the ribosomal exit channel https://www.biorxiv.org/content/10.1101/2025.11.22.689755v1
November 24, 2025 at 2:18 AM
Reposted by Álvaro López Codina
OPUS-ET: Resolving Compositional and Conformational Heterogeneities of Biomolecules in Cryo-Electron Tomography https://www.biorxiv.org/content/10.1101/2025.11.21.688990v1
November 24, 2025 at 2:18 AM
Reposted by Álvaro López Codina
Mapping Bidirectional Allosteric Communication in Arf GTPases https://www.biorxiv.org/content/10.1101/2025.11.21.689788v1
November 24, 2025 at 2:47 AM
Reposted by Álvaro López Codina
Proteins are dynamic structures, but structural biology often shows them as static snapshots. Inspired by long-exposure photography and generative art, I built ProteinCHAOS, an artistic tool inspired by molecular dynamics to capture protein flexibility over time, much like long-exposure images.
November 23, 2025 at 11:18 PM
Reposted by Álvaro López Codina
In this week's mitophagy news:

-a novel screen for endogenous modulators of PINK1-Parkin pathway uncovers unstudied dependencies
-autophagy regulation by phase separation, avidity and wetting
-a bacterial mitophagy receptor to evade inflammation

biomed.news/bims-tofagi/...
November 23, 2025 at 12:05 PM
Reposted by Álvaro López Codina
miRNA have multiple functions beyond their role in modulating translation.
November 23, 2025 at 3:18 PM
Reposted by Álvaro López Codina
Form and function of actin impacts actin health and aging. https://www.biorxiv.org/content/10.1101/2025.11.22.689949v1
November 23, 2025 at 3:30 PM
Reposted by Álvaro López Codina
Thrilled that our ZAK structures are finally out! It’s been a long but rewarding project. Big thanks to everyone who made this happen - especially to @Vienna Huso for her wonderful biochemistry experiments. It was great teamwork!
How does the kinase ZAK sense ribosome collisions? Find out in our latest collaboration with the @greenlab.bsky.social @doubleshuang.bsky.social @Vienna Huso: 1/4
rdcu.be/eRmJl
#ribosome #cryoEM #LMU #JHMI
November 23, 2025 at 4:12 PM
Reposted by Álvaro López Codina
Our manuscript on using the knot theory descriptor writhe to build kinetic models of IDP dynamics is now out in JCTC

pubs.acs.org/doi/full/10....

We think this approach establishes a new state-of-the-art for building markov state models of IDP dynamics.
November 23, 2025 at 4:56 PM
Reposted by Álvaro López Codina
Apical and basolateral plasma membranes in epithelial cells have distinct lipidomes and biophysical properties https://www.biorxiv.org/content/10.1101/2025.11.20.689573v1
November 23, 2025 at 5:30 PM
Reposted by Álvaro López Codina
How does the kinase ZAK sense ribosome collisions? Find out in our latest collaboration with the @greenlab.bsky.social @doubleshuang.bsky.social @Vienna Huso: 1/4
rdcu.be/eRmJl
#ribosome #cryoEM #LMU #JHMI
November 23, 2025 at 3:47 PM
Reposted by Álvaro López Codina
☕Li et al. uncover a connection between #metabolic cues and #mitochondria protein degradation, showing that specifically leucine stabilizes outer mitochondrial membrane proteins by inhibiting ubiquitylation and promoting mitochondrial respiration.
bit.ly/48t7ZPw
Leucine inhibits degradation of outer mitochondrial membrane proteins to adapt mitochondrial respiration - Nature Cell Biology
Li et al. uncover a connection between metabolic cues and mitochondrial protein degradation, showing that specifically leucine stabilizes outer mitochondrial membrane proteins by inhibiting ubiquityla...
bit.ly
November 23, 2025 at 7:00 AM
Reposted by Álvaro López Codina
☕Lu et al. show that, under proteotoxic stress, TDP-43 inclusions of skein-like morphology are guided by the chaperone HSP70 and its nucleotide exchange factor BAG3 to induce TDP-43 co-aggregation with F-actin-bound actin-binding proteins.
👉https://rdcu.be/eRkQb
bit.ly/43LYEje
TDP-43 skein-like inclusions are formed by BAG3- and HSP70-guided co-aggregation with actin-binding proteins - Nature Cell Biology
Lu et al. show that, under proteotoxic stress, TDP-43 inclusions of skein-like morphology are guided by the chaperone HSP70 and its nucleotide exchange factor BAG3 to induce TDP-43 co-aggregation with...
bit.ly
November 23, 2025 at 7:04 AM