Vera Pancaldi
@verapancaldi.bsky.social
Cancer Research Center of Toulouse and Barcelona Supercomputing Center. Interested in networks, heterogeneity and genome architecture. crct-inserm.fr/en/netbio2_en/
Wonderful sunny day in Liverpool for #ISMBECCB2025!
Marcelo Hurtado #TransMed talk on CellTFusion tomorrow 3:50, Hugo Chenel #NetBio poster (D-430) on GRNs. I will talk about our paper with Benoît Aliaga and Flavien Raynal in #RegSys on Wednesday. See you there!
academic.oup.com/nar/article/...
Marcelo Hurtado #TransMed talk on CellTFusion tomorrow 3:50, Hugo Chenel #NetBio poster (D-430) on GRNs. I will talk about our paper with Benoît Aliaga and Flavien Raynal in #RegSys on Wednesday. See you there!
academic.oup.com/nar/article/...
Global chromatin reorganization and regulation of genes with specific evolutionary ages during differentiation and cancer
Abstract. Cancer cells are highly plastic, favoring adaptation to changing conditions. Genes related to basic cellular processes evolved in ancient species
academic.oup.com
July 21, 2025 at 10:56 PM
Wonderful sunny day in Liverpool for #ISMBECCB2025!
Marcelo Hurtado #TransMed talk on CellTFusion tomorrow 3:50, Hugo Chenel #NetBio poster (D-430) on GRNs. I will talk about our paper with Benoît Aliaga and Flavien Raynal in #RegSys on Wednesday. See you there!
academic.oup.com/nar/article/...
Marcelo Hurtado #TransMed talk on CellTFusion tomorrow 3:50, Hugo Chenel #NetBio poster (D-430) on GRNs. I will talk about our paper with Benoît Aliaga and Flavien Raynal in #RegSys on Wednesday. See you there!
academic.oup.com/nar/article/...
Thanks for the invitation! Made it to Liverpool and looking forward to the session!
The #RegSys @iscb-regsys.bsky.social track is gonna be outstanding again this year with a great selection of talks and keynotes @verapancaldi.bsky.social, Mafalda Dias, Roser Vento-Tormo, and @lucapinello.bsky.social !
www.iscb.org/ismbeccb2025...
www.iscb.org/ismbeccb2025...
RegSys
ISCB - International Society for Computational Biology
www.iscb.org
July 21, 2025 at 10:23 PM
Thanks for the invitation! Made it to Liverpool and looking forward to the session!
It was a real pleasure to discover the wonderful @ciml.bsky.social institute! Clearly a successful example of how bioinformatics can be central to biomedical research, very interesting conversations, thanks for the invitation!
Yesterday, we had the pleasure to welcome Dr. Vera Pancaldi from Centre de Recherche en Cancérologie de Toulouse in our CIML seminar series.
Vera gave a brillant seminar on "Data-driven mathematical models for simulating the tumour microenvironment"
Thanks for visiting @verapancaldi.bsky.social !
Vera gave a brillant seminar on "Data-driven mathematical models for simulating the tumour microenvironment"
Thanks for visiting @verapancaldi.bsky.social !
June 28, 2025 at 3:51 PM
It was a real pleasure to discover the wonderful @ciml.bsky.social institute! Clearly a successful example of how bioinformatics can be central to biomedical research, very interesting conversations, thanks for the invitation!
Reposted by Vera Pancaldi
Kristel Van Steen kicks off our #NetBioMed2025 Satellite discussing how to use #networkscience to develop individual medical networks, going towards personalized medicine!
@netsciconf.bsky.social @verapancaldi.bsky.social
@netsciconf.bsky.social @verapancaldi.bsky.social
June 2, 2025 at 7:35 AM
Kristel Van Steen kicks off our #NetBioMed2025 Satellite discussing how to use #networkscience to develop individual medical networks, going towards personalized medicine!
@netsciconf.bsky.social @verapancaldi.bsky.social
@netsciconf.bsky.social @verapancaldi.bsky.social
Reposted by Vera Pancaldi
Our second talk of the day corresponds to Natasa Przulj, who gave us a detailed explanation on how to use #AI techniques in order to build #complexnetworks based on multi-omics!
#NetBioMed2025 #NetSci2025 @verapancaldi.bsky.social
#NetBioMed2025 #NetSci2025 @verapancaldi.bsky.social
June 2, 2025 at 7:40 AM
Our second talk of the day corresponds to Natasa Przulj, who gave us a detailed explanation on how to use #AI techniques in order to build #complexnetworks based on multi-omics!
#NetBioMed2025 #NetSci2025 @verapancaldi.bsky.social
#NetBioMed2025 #NetSci2025 @verapancaldi.bsky.social
Reposted by Vera Pancaldi
Happening just now #NetSci2025 folks! Don't miss it, we are just starting our #NetBioMed2025 satellite at @netsciconf.bsky.social!
@netsciconf.bsky.social crossing Holland on my way to Maastricht for @netbiomed2025.bsky.social Join us tomorrow at FASOS for a great day of network biomedicine talks!
June 2, 2025 at 7:41 AM
Happening just now #NetSci2025 folks! Don't miss it, we are just starting our #NetBioMed2025 satellite at @netsciconf.bsky.social!
Reposted by Vera Pancaldi
We just had Martin Guillemaud, who is using network #clustering applied to #cytokine profiles in order to better understand epileptic seizures in multiple patients. An amazing talk at #NetBioMed2025!
#NetSci2025 @verapancaldi.bsky.social
#NetSci2025 @verapancaldi.bsky.social
June 2, 2025 at 7:51 AM
We just had Martin Guillemaud, who is using network #clustering applied to #cytokine profiles in order to better understand epileptic seizures in multiple patients. An amazing talk at #NetBioMed2025!
#NetSci2025 @verapancaldi.bsky.social
#NetSci2025 @verapancaldi.bsky.social
Reposted by Vera Pancaldi
At #NetBioMed2025 Martina Summer-Kutmon just introduced us to her methodology to use a #COVID dataset in order to build knowledge graphs and explain multiple post-pandemic effects on people. Very nice!
#NetSci2025 @verapancaldi.bsky.social
#NetSci2025 @verapancaldi.bsky.social
June 2, 2025 at 8:18 AM
At #NetBioMed2025 Martina Summer-Kutmon just introduced us to her methodology to use a #COVID dataset in order to build knowledge graphs and explain multiple post-pandemic effects on people. Very nice!
#NetSci2025 @verapancaldi.bsky.social
#NetSci2025 @verapancaldi.bsky.social
Reposted by Vera Pancaldi
Before lunch break Elma Dervic gave us a very quick talk on how to build comorbidity networks from data. I loved her visualization through time. More amazing talks at #NetBioMed2025 after lunch, so stay tuned! #NetSci2025 @verapancaldi.bsky.social
June 2, 2025 at 10:33 AM
Before lunch break Elma Dervic gave us a very quick talk on how to build comorbidity networks from data. I loved her visualization through time. More amazing talks at #NetBioMed2025 after lunch, so stay tuned! #NetSci2025 @verapancaldi.bsky.social
Reposted by Vera Pancaldi
Kicking off our afternoon session, @cantinilab.bsky.social discusses her dual approach to capture both multi-modal dimensionality reduction and molecular network inference. She gave a very nice overview of her work!
#NetBioMed2025 #NetSci2025 @verapancaldi.bsky.social
#NetBioMed2025 #NetSci2025 @verapancaldi.bsky.social
June 2, 2025 at 12:27 PM
Kicking off our afternoon session, @cantinilab.bsky.social discusses her dual approach to capture both multi-modal dimensionality reduction and molecular network inference. She gave a very nice overview of her work!
#NetBioMed2025 #NetSci2025 @verapancaldi.bsky.social
#NetBioMed2025 #NetSci2025 @verapancaldi.bsky.social
Reposted by Vera Pancaldi
We just had an amazing talk by Manuel Ruiz-Botella, who introduced us to #CoCoGraph, a graph diffusion model for the generation of realistic synthetic molecules. Only here, at #NetBioMed2025, a satellite being held at #NetSci2025! @verapancaldi.bsky.social @netsciconf.bsky.social
June 2, 2025 at 1:28 PM
We just had an amazing talk by Manuel Ruiz-Botella, who introduced us to #CoCoGraph, a graph diffusion model for the generation of realistic synthetic molecules. Only here, at #NetBioMed2025, a satellite being held at #NetSci2025! @verapancaldi.bsky.social @netsciconf.bsky.social
Reposted by Vera Pancaldi
Please don't forget to join #NetBioMed2025 tomorrow, the only @netsciconf.bsky.social satellite on #machinelearning, #AI, and #networkscience applied to #medicine, #biology, #digitaltwins, and beyond!
@netsciconf.bsky.social crossing Holland on my way to Maastricht for @netbiomed2025.bsky.social Join us tomorrow at FASOS for a great day of network biomedicine talks!
June 1, 2025 at 6:12 PM
Please don't forget to join #NetBioMed2025 tomorrow, the only @netsciconf.bsky.social satellite on #machinelearning, #AI, and #networkscience applied to #medicine, #biology, #digitaltwins, and beyond!
@netsciconf.bsky.social crossing Holland on my way to Maastricht for @netbiomed2025.bsky.social Join us tomorrow at FASOS for a great day of network biomedicine talks!
June 1, 2025 at 4:34 PM
@netsciconf.bsky.social crossing Holland on my way to Maastricht for @netbiomed2025.bsky.social Join us tomorrow at FASOS for a great day of network biomedicine talks!
NetBioMed @netsciconf.bsky.social in Maastricht next Monday 2nd June! Thanks to @bsc-cns.bsky.social, @plos.org and many more for sponsorship netbiomed2025.github.io/2025/sponsors.
Please register here so we get the right amount of lunch:-)
alturl.com/kwom9 #NetBioMed2025 #NetSci2025
Please register here so we get the right amount of lunch:-)
alturl.com/kwom9 #NetBioMed2025 #NetSci2025
May 27, 2025 at 3:27 PM
NetBioMed @netsciconf.bsky.social in Maastricht next Monday 2nd June! Thanks to @bsc-cns.bsky.social, @plos.org and many more for sponsorship netbiomed2025.github.io/2025/sponsors.
Please register here so we get the right amount of lunch:-)
alturl.com/kwom9 #NetBioMed2025 #NetSci2025
Please register here so we get the right amount of lunch:-)
alturl.com/kwom9 #NetBioMed2025 #NetSci2025
Single cell multiomics meet network scientists, join us in Maastricht @netbiomed2025.bsky.social @netscience.bsky.social
How can we design #machinelearning methods able to co-analyze the numerous available #omics data and translate them into actionable biological knowledge? @cantinilab.bsky.social will answer this and other exciting questions related to single-cell data integration! #NetBioMed2025 #NetSci2025
May 14, 2025 at 9:20 PM
Single cell multiomics meet network scientists, join us in Maastricht @netbiomed2025.bsky.social @netscience.bsky.social
How can we develop theoretical approaches that allow us to integrate multi-scale data to understand and cure degenerative diseases? Check out this talk on #networkmedicine and #digitaltwins by @lmrocha.bsky.social!
#NetBioMed2025 #NetSci2025
#NetBioMed2025 #NetSci2025
May 12, 2025 at 9:13 PM
Reposted by Vera Pancaldi
#NetSci2025 takes place next month and all this week we will finally announce our keynote talks, discussing #digitaltwins, #multiomics, #biomedicine, #AI, and much more! 🧬🩺🔬
@netsciconf.bsky.social
Check out our full agenda for #NetBioMed2025 here below. 👇👀
netbiomed2025.github.io/2025/agenda
@netsciconf.bsky.social
Check out our full agenda for #NetBioMed2025 here below. 👇👀
netbiomed2025.github.io/2025/agenda
Agenda
The official website for NetBioMed satellite
netbiomed2025.github.io
May 12, 2025 at 1:47 PM
#NetSci2025 takes place next month and all this week we will finally announce our keynote talks, discussing #digitaltwins, #multiomics, #biomedicine, #AI, and much more! 🧬🩺🔬
@netsciconf.bsky.social
Check out our full agenda for #NetBioMed2025 here below. 👇👀
netbiomed2025.github.io/2025/agenda
@netsciconf.bsky.social
Check out our full agenda for #NetBioMed2025 here below. 👇👀
netbiomed2025.github.io/2025/agenda
Don't miss your chance to speak to @benoit3166.bsky.social about our new paper on gene ages and 3D chromatin organisation in Lyon!
Come check out my poster (#4) at the Persister Cells Conference! I’ll be presenting our latest publication from 1:00 to 2:30 PM—happy to discuss and answer questions. See you there!
📍 Poster #4
🕐 1:00 - 2:30 PM
More details here: t.co/stm6WyvOYR
@helloeacr.bsky.social @verapancaldi.bsky.social
📍 Poster #4
🕐 1:00 - 2:30 PM
More details here: t.co/stm6WyvOYR
@helloeacr.bsky.social @verapancaldi.bsky.social
https://academic.oup.com/nar/article-abstract/doi/10.1093/nar/gkaf084/8020235?utm_source=etoc&utm_campaign=nar&utm_medium=email
t.co
March 19, 2025 at 1:37 PM
Don't miss your chance to speak to @benoit3166.bsky.social about our new paper on gene ages and 3D chromatin organisation in Lyon!
Reposted by Vera Pancaldi
An important graph and caption on the impact of Covid www.nytimes.com/interactive/...
March 12, 2025 at 3:01 AM
An important graph and caption on the impact of Covid www.nytimes.com/interactive/...
Really excited that Anna Niarakis will give the next CRCT #bioinformatics seminar on Friday 14th March at 11 in salle Cazaux!
March 10, 2025 at 10:10 AM
Really excited that Anna Niarakis will give the next CRCT #bioinformatics seminar on Friday 14th March at 11 in salle Cazaux!
Last few hours for early bird fee to register and attend @netbiomed2025.bsky.social in Maastricht, 2nd June, great speakers ! netbiomed2025.github.io #AI #DigitalTwins
4 days to go before @netsciconf.bsky.social
early bird tariff ends: Don't miss your chance to attend
@netbiomed2025.bsky.social, don't forget to register. Please check out our website for details netbiomed2025.github.io #AI #DigitalTwins
early bird tariff ends: Don't miss your chance to attend
@netbiomed2025.bsky.social, don't forget to register. Please check out our website for details netbiomed2025.github.io #AI #DigitalTwins
March 6, 2025 at 3:18 PM
Last few hours for early bird fee to register and attend @netbiomed2025.bsky.social in Maastricht, 2nd June, great speakers ! netbiomed2025.github.io #AI #DigitalTwins
4 days to go before @netsciconf.bsky.social
early bird tariff ends: Don't miss your chance to attend
@netbiomed2025.bsky.social, don't forget to register. Please check out our website for details netbiomed2025.github.io #AI #DigitalTwins
early bird tariff ends: Don't miss your chance to attend
@netbiomed2025.bsky.social, don't forget to register. Please check out our website for details netbiomed2025.github.io #AI #DigitalTwins
March 2, 2025 at 9:20 PM
4 days to go before @netsciconf.bsky.social
early bird tariff ends: Don't miss your chance to attend
@netbiomed2025.bsky.social, don't forget to register. Please check out our website for details netbiomed2025.github.io #AI #DigitalTwins
early bird tariff ends: Don't miss your chance to attend
@netbiomed2025.bsky.social, don't forget to register. Please check out our website for details netbiomed2025.github.io #AI #DigitalTwins
Don't miss a chance to register for this great meeting @netsciconf.bsky.social ! Registration is early bird until March 6th, please check out our website netbiomed2025.github.io
February 27, 2025 at 2:11 PM
Don't miss a chance to register for this great meeting @netsciconf.bsky.social ! Registration is early bird until March 6th, please check out our website netbiomed2025.github.io
Really happy about our paper about organisation of genes in the 3D nucleus according to their ages in differentiation and oncogenesis. Some of this has been bugging me for a decade, still a lot to do, but it's a first step! Congrats to Flavien Raynal and @benoit3166.bsky.social! Check the thread!
Our new paper is out! Our findings shed light on gene regulation according to evolutionary age and suggest this organization changes across differentiation and oncogenesis. Read our thread below! #cancer #chromatin #evolution @narjournal.bsky.social shorturl.at/rJ2VQ
Global chromatin reorganization and regulation of genes with specific evolutionary ages during differentiation and cancer
Abstract. Cancer cells are highly plastic, favoring adaptation to changing conditions. Genes related to basic cellular processes evolved in ancient species
shorturl.at
February 23, 2025 at 4:39 PM
Really happy about our paper about organisation of genes in the 3D nucleus according to their ages in differentiation and oncogenesis. Some of this has been bugging me for a decade, still a lot to do, but it's a first step! Congrats to Flavien Raynal and @benoit3166.bsky.social! Check the thread!
Only 24h to submit your abstract to NetBioMed @netsciconf.bsky.social ! Join our wonderful speakers in Maastricht on June 2nd for AI and digital twins in biomedical research.
Only 8 days left to submit for @netbiomed2025.bsky.social ! If any company is interested in sponsoring we will be happy to discuss options.
Meet our transdisciplinary panel of experts. Together, they will bridge computational biology and network science to solve cutting-edge biomedical problems. Want to join us? Submit your contribution by February 10th! 📅 #NetBioMed2025 #NetSci2025 #AI #Biomedicine #NetworkScience
February 13, 2025 at 10:26 PM
Only 24h to submit your abstract to NetBioMed @netsciconf.bsky.social ! Join our wonderful speakers in Maastricht on June 2nd for AI and digital twins in biomedical research.