Silvia Ramundo
@sramundo.bsky.social
Curious scientist leading a research team mainly working on organelle biology and biotechnology: we study -and often “torture”- chloroplasts to understand how they do their magic ;)
https://www.oeaw.ac.at/gmi/research/research-groups/silvia-ramundo
https://www.oeaw.ac.at/gmi/research/research-groups/silvia-ramundo
Pinned
Silvia Ramundo
@sramundo.bsky.social
· Feb 14
Welcome to the GMI
YouTube video by GregorMendelInstitute GMI
youtu.be
Welcome to the Gregor Mendel Institute -Europe's HHMI for plant and algal biologists. Located at the Vienna Biocenter, we're privileged to have amazing colleagues in the neighboring institutes. Living and working in the world's most livable city, we're doing 🧪 what we love 💚! youtu.be/uoh9peXNtQ8
Reposted by Silvia Ramundo
Link here doi.org/10.1101/2025...
Evaluating effects of elevated [CO2] and accelerated NPQ relaxation on yield, physiology and transcription in soybean
Improving photosynthetic efficiency is proposed as a means of enhancing crop productivity under rising atmospheric CO2 concentrations ([CO2]). To assess whether additive gains can be realized from sim...
doi.org
November 23, 2025 at 10:04 PM
Link here doi.org/10.1101/2025...
Reposted by Silvia Ramundo
Out now from @diamondlab.bsky.social — stable microbiome communities using tractable cyanobacteria. An important development for folks working on cyanobacteria, microbial community formation and establishment in lab settings, and microbial community ecology! Read here: tinyurl.com/3cs2x6r7
July 10, 2025 at 7:10 PM
Out now from @diamondlab.bsky.social — stable microbiome communities using tractable cyanobacteria. An important development for folks working on cyanobacteria, microbial community formation and establishment in lab settings, and microbial community ecology! Read here: tinyurl.com/3cs2x6r7
Reposted by Silvia Ramundo
New paper out: An archaeal genetic code with all TAG codons as pyrrolysine: www.science.org/doi/10.1126/...
An archaeal genetic code with all TAG codons as pyrrolysine
Multiple genetic codes developed during the evolution of eukaryotes and bacteria, yet no alternative genetic code is known for archaea. We used proteomics to confirm our prediction that certain archae...
www.science.org
November 23, 2025 at 7:22 PM
New paper out: An archaeal genetic code with all TAG codons as pyrrolysine: www.science.org/doi/10.1126/...
Reposted by Silvia Ramundo
Interview re coral reefs with Scientific American:
“We shouldn’t give up on the world’s coral reefs…. But restoration is not the way to save them.
The way to save them is to deal with greenhouse gas emissions, & that, of course, is much, much harder.”
www.scientificamerican.com/article/eart...
“We shouldn’t give up on the world’s coral reefs…. But restoration is not the way to save them.
The way to save them is to deal with greenhouse gas emissions, & that, of course, is much, much harder.”
www.scientificamerican.com/article/eart...
Earth’s Coral Reefs Face a New, Deadly Mass Bleaching. They Can Still Be Saved
“A mass bleaching event is, by definition, a mass mortality event,” a leading coral reef expert says
www.scientificamerican.com
January 18, 2025 at 9:53 PM
Interview re coral reefs with Scientific American:
“We shouldn’t give up on the world’s coral reefs…. But restoration is not the way to save them.
The way to save them is to deal with greenhouse gas emissions, & that, of course, is much, much harder.”
www.scientificamerican.com/article/eart...
“We shouldn’t give up on the world’s coral reefs…. But restoration is not the way to save them.
The way to save them is to deal with greenhouse gas emissions, & that, of course, is much, much harder.”
www.scientificamerican.com/article/eart...
Reposted by Silvia Ramundo
Last call! Applications for the @crg.eu International PhD Programme 2025 in beautiful Barcelona close next week! Join us and our inspiring colleagues at the CRG - an exceptional environment for discovery, creativity, and scientific growth.
Apply here: www.crg.eu/en/content/t...
Apply here: www.crg.eu/en/content/t...
November 22, 2025 at 1:36 PM
Last call! Applications for the @crg.eu International PhD Programme 2025 in beautiful Barcelona close next week! Join us and our inspiring colleagues at the CRG - an exceptional environment for discovery, creativity, and scientific growth.
Apply here: www.crg.eu/en/content/t...
Apply here: www.crg.eu/en/content/t...
Reposted by Silvia Ramundo
Finally out in @nature.com! We uncovered a mechanistic framework for a general and conserved mRNA nuclear export pathway. www.nature.com/articles/s41.... 1/
November 19, 2025 at 11:22 PM
Finally out in @nature.com! We uncovered a mechanistic framework for a general and conserved mRNA nuclear export pathway. www.nature.com/articles/s41.... 1/
Reposted by Silvia Ramundo
I’m proud to present the main work from my postdoc, 3+ years in making from scratch, my ultimate #MimulusPropaganda up till now:
The Moment
That
Symmetry
Breaks.
#plantscience #development #imaging #microscopy 🧪🌸🔬
w. Captain Yaowu & @biancatash.bsky.social
www.biorxiv.org/content/10.1...
The Moment
That
Symmetry
Breaks.
#plantscience #development #imaging #microscopy 🧪🌸🔬
w. Captain Yaowu & @biancatash.bsky.social
www.biorxiv.org/content/10.1...
August 7, 2025 at 2:44 PM
I’m proud to present the main work from my postdoc, 3+ years in making from scratch, my ultimate #MimulusPropaganda up till now:
The Moment
That
Symmetry
Breaks.
#plantscience #development #imaging #microscopy 🧪🌸🔬
w. Captain Yaowu & @biancatash.bsky.social
www.biorxiv.org/content/10.1...
The Moment
That
Symmetry
Breaks.
#plantscience #development #imaging #microscopy 🧪🌸🔬
w. Captain Yaowu & @biancatash.bsky.social
www.biorxiv.org/content/10.1...
Reposted by Silvia Ramundo
We are looking for a postdoctoral fellow to work on induced proximity 🤜🤛 and functional genomics! Join our team in Toronto 🇨🇦 to tackle major challenges in oncology and neurodegeneration. www.nature.com/naturecareer...
POSTDOCTORAL FELLOW - Toronto (City), Ontario (CA) job with Taipale Lab, Donnelly Centre, University of Toronto | 12849004
The Taipale lab in the Donnelly CCBR and University of Toronto is looking for a highly motivated Postdoctoral Fellow
www.nature.com
November 19, 2025 at 5:51 PM
We are looking for a postdoctoral fellow to work on induced proximity 🤜🤛 and functional genomics! Join our team in Toronto 🇨🇦 to tackle major challenges in oncology and neurodegeneration. www.nature.com/naturecareer...
Reposted by Silvia Ramundo
Registration for THE chemical biology conference of 2026 is now open! EMBO ChemBio 2026 in Heidelberg
DeGrado, Arikin, Picotti (Keynotes). @lmkdassama.bsky.social @brianliau.bsky.social @rhodamine110.bsky.social @benlehner.bsky.social @alitavassoli.bsky.social
www.embl.org/about/info/c...
DeGrado, Arikin, Picotti (Keynotes). @lmkdassama.bsky.social @brianliau.bsky.social @rhodamine110.bsky.social @benlehner.bsky.social @alitavassoli.bsky.social
www.embl.org/about/info/c...
Chemical biology 2026
www.embl.org
November 11, 2025 at 5:46 PM
Registration for THE chemical biology conference of 2026 is now open! EMBO ChemBio 2026 in Heidelberg
DeGrado, Arikin, Picotti (Keynotes). @lmkdassama.bsky.social @brianliau.bsky.social @rhodamine110.bsky.social @benlehner.bsky.social @alitavassoli.bsky.social
www.embl.org/about/info/c...
DeGrado, Arikin, Picotti (Keynotes). @lmkdassama.bsky.social @brianliau.bsky.social @rhodamine110.bsky.social @benlehner.bsky.social @alitavassoli.bsky.social
www.embl.org/about/info/c...
Reposted by Silvia Ramundo
ahem, ONE of THE chemical biology conferences of 2026:) www.janelia.org/you-janelia/...
Chemical Tools for Complex Biological Systems IV
Organizers Luke Lavis, HHMI/Janelia Research Campus Matthew Bogyo, Stanford University Zev Gartner, University of California, San Francisco Jennifer Prescher, University of California, Irvine
www.janelia.org
November 11, 2025 at 6:03 PM
ahem, ONE of THE chemical biology conferences of 2026:) www.janelia.org/you-janelia/...
Reposted by Silvia Ramundo
Join our vibrant scientific community @viennabiocenter.bsky.social! It’s an extremely supportive environment to start a lab 🚀
www.imp.ac.at/career/open-...
www.imp.ac.at/career/open-...
🌍Open call: Junior Group Leader positions!
Join a world-class biomedical research institute at the heart of the Vienna BioCenter, where curiosity drives discovery.
Lead your own lab, pursue bold ideas, and shape the future of science at the IMP: www.imp.ac.at/career/open-...
Join a world-class biomedical research institute at the heart of the Vienna BioCenter, where curiosity drives discovery.
Lead your own lab, pursue bold ideas, and shape the future of science at the IMP: www.imp.ac.at/career/open-...
November 10, 2025 at 5:55 PM
Join our vibrant scientific community @viennabiocenter.bsky.social! It’s an extremely supportive environment to start a lab 🚀
www.imp.ac.at/career/open-...
www.imp.ac.at/career/open-...
Reposted by Silvia Ramundo
Join us at the Vienna BioCenter and @impvienna.bsky.social! Full disclaimer: I’m obviously biased but: mind-blowing facilities (!!!) and a great collaborative research culture make this an ideal place for anyone; especially suited to build up a lab. Plus Vienna is an amazing city to live in 😊
November 10, 2025 at 9:30 PM
Join us at the Vienna BioCenter and @impvienna.bsky.social! Full disclaimer: I’m obviously biased but: mind-blowing facilities (!!!) and a great collaborative research culture make this an ideal place for anyone; especially suited to build up a lab. Plus Vienna is an amazing city to live in 😊
Reposted by Silvia Ramundo
🌍Open call: Junior Group Leader positions!
Join a world-class biomedical research institute at the heart of the Vienna BioCenter, where curiosity drives discovery.
Lead your own lab, pursue bold ideas, and shape the future of science at the IMP: www.imp.ac.at/career/open-...
Join a world-class biomedical research institute at the heart of the Vienna BioCenter, where curiosity drives discovery.
Lead your own lab, pursue bold ideas, and shape the future of science at the IMP: www.imp.ac.at/career/open-...
November 10, 2025 at 1:26 PM
🌍Open call: Junior Group Leader positions!
Join a world-class biomedical research institute at the heart of the Vienna BioCenter, where curiosity drives discovery.
Lead your own lab, pursue bold ideas, and shape the future of science at the IMP: www.imp.ac.at/career/open-...
Join a world-class biomedical research institute at the heart of the Vienna BioCenter, where curiosity drives discovery.
Lead your own lab, pursue bold ideas, and shape the future of science at the IMP: www.imp.ac.at/career/open-...
Reposted by Silvia Ramundo
Excited to share our new paper introducing BEREN, a tool for identifying giant and other dsDNA viruses from metagenomic data — now online!
Beren improves viral genome recovery and expands our view of the virosphere.
academic.oup.com/bioinformati...
Beren improves viral genome recovery and expands our view of the virosphere.
academic.oup.com/bioinformati...
BEREN: A bioinformatic tool for recovering Giant viruses, Polinton-like Viruses, and Virophages in metagenomic data
AbstractMotivation. Viruses in the kingdom Bamfordvirae, specifically giant viruses (NCLDVs) in the phylum Nucleocytoviricota and smaller members in the Pr
academic.oup.com
November 8, 2025 at 6:41 PM
Excited to share our new paper introducing BEREN, a tool for identifying giant and other dsDNA viruses from metagenomic data — now online!
Beren improves viral genome recovery and expands our view of the virosphere.
academic.oup.com/bioinformati...
Beren improves viral genome recovery and expands our view of the virosphere.
academic.oup.com/bioinformati...
Reposted by Silvia Ramundo
Finally out! 🤩 Check out our HT- PELSA for high throughput screening！
Happy to see our HT-PELSA paper now published in @natsmb.nature.com 🎊 Big thanks for the constructive review process! 📖Read the manuscript here (www.nature.com/articles/s41...) & check the thread for additional information ⬇️
November 5, 2025 at 4:28 PM
Finally out! 🤩 Check out our HT- PELSA for high throughput screening！
Reposted by Silvia Ramundo
Last year it was discovered that a single bacterial NLR-like protein can recognize multiple, structurally unrelated phage proteins (Béchon et al, Kibby et al)
Now, a new study shows the same for a plant NLR. Another example how principles of immunity remain conserved from bacteria to eukaryotes
Now, a new study shows the same for a plant NLR. Another example how principles of immunity remain conserved from bacteria to eukaryotes
A wheat NLR conferring broad-spectrum resistance against powdery mildew by recognizing two structurally diverse AVR effectors. Interested? Check out our newest preprint: www.biorxiv.org/content/10.1...
Dual recognition of structurally unrelated mildew effectors underlies the broad-spectrum resistance of Pm3e in wheat
Broad-spectrum resistance genes are highly valuable for sustainable crop protection, yet the molecular basis of their activity is often unknown. The Pm3 allelic series in wheat encodes NLR receptors t...
www.biorxiv.org
November 2, 2025 at 6:34 PM
Last year it was discovered that a single bacterial NLR-like protein can recognize multiple, structurally unrelated phage proteins (Béchon et al, Kibby et al)
Now, a new study shows the same for a plant NLR. Another example how principles of immunity remain conserved from bacteria to eukaryotes
Now, a new study shows the same for a plant NLR. Another example how principles of immunity remain conserved from bacteria to eukaryotes
Reposted by Silvia Ramundo
Hi everyone, a few years ago, we started a list of labs studying bacterial immunty for students, editors, conference organizers... (currently n=79).
Update time ! Send me a message to 1) add your lab or others 2) Correct info
docs.google.com/spreadsheets...
#Phagesky #Microsky
Update time ! Send me a message to 1) add your lab or others 2) Correct info
docs.google.com/spreadsheets...
#Phagesky #Microsky
Labs in bacterial immunity
docs.google.com
November 4, 2025 at 3:06 PM
Hi everyone, a few years ago, we started a list of labs studying bacterial immunty for students, editors, conference organizers... (currently n=79).
Update time ! Send me a message to 1) add your lab or others 2) Correct info
docs.google.com/spreadsheets...
#Phagesky #Microsky
Update time ! Send me a message to 1) add your lab or others 2) Correct info
docs.google.com/spreadsheets...
#Phagesky #Microsky
Reposted by Silvia Ramundo
HT-PELSA, a new proteomics tool by EMBL researchers, processes samples 100x faster and works directly with complex crude cell, tissue, and bacterial lysates – developments which could accelerate drug discovery and basic biological research 💊
🔗 www.embl.org/news/science...
🔗 www.embl.org/news/science...
November 5, 2025 at 10:09 AM
HT-PELSA, a new proteomics tool by EMBL researchers, processes samples 100x faster and works directly with complex crude cell, tissue, and bacterial lysates – developments which could accelerate drug discovery and basic biological research 💊
🔗 www.embl.org/news/science...
🔗 www.embl.org/news/science...
Reposted by Silvia Ramundo
How is epigenetic information inherited? We found that CDCA7 proteins are critical players in the inheritance of DNA methylation at CG sites in plants, and this is true both in the lab and in the wild. How does this work? 🧵👇
New paper! Work led by @p-bourguet.bsky.social and Frédéric Berger at the GMI of the @oeaw.bsky.social and @esasaki007.bsky.social identified how protein CDCA7 helps plants stably maintain epigenetic modifications across generations.
Read more: www.oeaw.ac.at/gmi/detail/n...
Read more: www.oeaw.ac.at/gmi/detail/n...
November 7, 2025 at 5:05 PM
How is epigenetic information inherited? We found that CDCA7 proteins are critical players in the inheritance of DNA methylation at CG sites in plants, and this is true both in the lab and in the wild. How does this work? 🧵👇
Reposted by Silvia Ramundo
just in time for the opening of the @hohmannulrich.bsky.social group at @imbmainz.bsky.social
what started as a project on how cells export piRNA precursors, ended up as a tour de force in mRNA export. truly wonderful collaboration with @plaschkalab.bsky.social at the @viennabiocenter.bsky.social
what started as a project on how cells export piRNA precursors, ended up as a tour de force in mRNA export. truly wonderful collaboration with @plaschkalab.bsky.social at the @viennabiocenter.bsky.social
New paper alert! Scientists in Clemens Plaschka’s lab at the IMP and @juliusbrennecke.bsky.social's lab at
@imbavienna.bsky.social solved a decade-old puzzle, uncovering how the information molecule mRNA travels from the cell’s nucleus to its periphery. More: bit.ly/4nHcvys
@imbavienna.bsky.social solved a decade-old puzzle, uncovering how the information molecule mRNA travels from the cell’s nucleus to its periphery. More: bit.ly/4nHcvys
November 7, 2025 at 6:03 PM
just in time for the opening of the @hohmannulrich.bsky.social group at @imbmainz.bsky.social
what started as a project on how cells export piRNA precursors, ended up as a tour de force in mRNA export. truly wonderful collaboration with @plaschkalab.bsky.social at the @viennabiocenter.bsky.social
what started as a project on how cells export piRNA precursors, ended up as a tour de force in mRNA export. truly wonderful collaboration with @plaschkalab.bsky.social at the @viennabiocenter.bsky.social
Reposted by Silvia Ramundo
📢 Open Call! The Max Perutz Labs invite applications for a Tenure-Track Professorship in Genome Biology. We are particularly interested in researchers investigating the molecular and biophysical mechanisms underlying genome function and regulation. More details ➡️ tinyurl.com/3t7vvdct
November 5, 2025 at 10:59 AM
📢 Open Call! The Max Perutz Labs invite applications for a Tenure-Track Professorship in Genome Biology. We are particularly interested in researchers investigating the molecular and biophysical mechanisms underlying genome function and regulation. More details ➡️ tinyurl.com/3t7vvdct
Reposted by Silvia Ramundo
Thank you, Laura Tran from The Scientist, for this profile! And special thanks to @joeecker.bsky.social and @thorstenlangner.bsky.social for their kind words. I feel very fortunate to be surrounded by such supportive mentors, colleagues, and lab members!
Looking for a good read?
@tatsuyanobori.bsky.social is featured on The Scientist sharing his scientific journey from Japan to the UK.
“It circles back to my initial ecological interest and how single-cell level interactions might have a ripple effect on the actual ecosystem."
@tatsuyanobori.bsky.social is featured on The Scientist sharing his scientific journey from Japan to the UK.
“It circles back to my initial ecological interest and how single-cell level interactions might have a ripple effect on the actual ecosystem."
Living Maps: Uncovering the Spatial Biology of Plants
Tatsuya Nobori brings high-resolution multiomic approaches to plant biology to map how plants interact with microbes on a cellular level in 3D.
www.the-scientist.com
November 6, 2025 at 6:52 PM
Thank you, Laura Tran from The Scientist, for this profile! And special thanks to @joeecker.bsky.social and @thorstenlangner.bsky.social for their kind words. I feel very fortunate to be surrounded by such supportive mentors, colleagues, and lab members!
Reposted by Silvia Ramundo
Just read this great quote from one of my scientific heroes: Franklin Harold: ‘The way of science is for the best of our achievements to endure in substance but lose their individuality, like raindrops falling into a pond.’
November 7, 2025 at 10:38 AM
Just read this great quote from one of my scientific heroes: Franklin Harold: ‘The way of science is for the best of our achievements to endure in substance but lose their individuality, like raindrops falling into a pond.’
Reposted by Silvia Ramundo
And just when you thought things were settling down, the enigmatic Asgard archaea have another surprise in store! Cell cycle/life cycle stage-specific internal compartments with almost no eukaryote-derived clues as to how they might function.
Beautiful tomography and microscopy - congrats all 🤩
Beautiful tomography and microscopy - congrats all 🤩
An Asgard archaeon with internal membrane compartments
Brilliant study led by @fmacleod.bsky.social and Andriko von Kügelgen. Tight collaboration with @buzzbaum.bsky.social and lab. Congrats to all authors!
www.biorxiv.org/content/10.1...
Brilliant study led by @fmacleod.bsky.social and Andriko von Kügelgen. Tight collaboration with @buzzbaum.bsky.social and lab. Congrats to all authors!
www.biorxiv.org/content/10.1...
November 7, 2025 at 10:56 AM
And just when you thought things were settling down, the enigmatic Asgard archaea have another surprise in store! Cell cycle/life cycle stage-specific internal compartments with almost no eukaryote-derived clues as to how they might function.
Beautiful tomography and microscopy - congrats all 🤩
Beautiful tomography and microscopy - congrats all 🤩
Reposted by Silvia Ramundo
Beautiful and important work. Congrats @tbharat-lab.bsky.social @buzzbaum.bsky.social and colleagues!
An Asgard archaeon with internal membrane compartments
Brilliant study led by @fmacleod.bsky.social and Andriko von Kügelgen. Tight collaboration with @buzzbaum.bsky.social and lab. Congrats to all authors!
www.biorxiv.org/content/10.1...
Brilliant study led by @fmacleod.bsky.social and Andriko von Kügelgen. Tight collaboration with @buzzbaum.bsky.social and lab. Congrats to all authors!
www.biorxiv.org/content/10.1...
November 7, 2025 at 11:35 AM
Beautiful and important work. Congrats @tbharat-lab.bsky.social @buzzbaum.bsky.social and colleagues!