Simon Danisch
@simi.bsky.social
Working on Julia, Graphics, Plotting and GPU computing - studied Cognitive Science, creator of Makie.jl
Reposted by Simon Danisch
We figured out flow matching over states that change dimension. With "Branching Flows", the model decides how big things must be! This works wherever flow matching works, with discrete, continuous, and manifold states. We think this will unlock some genuinely new capabilities.
November 10, 2025 at 9:10 AM
We figured out flow matching over states that change dimension. With "Branching Flows", the model decides how big things must be! This works wherever flow matching works, with discrete, continuous, and manifold states. We think this will unlock some genuinely new capabilities.
Reposted by Simon Danisch
Oh and as usual, these visualizations (which are, to us, key to understanding these processes) were made by @antonoresten.bsky.social in @makie.org (@simi.bsky.social).
November 10, 2025 at 9:10 AM
Oh and as usual, these visualizations (which are, to us, key to understanding these processes) were made by @antonoresten.bsky.social in @makie.org (@simi.bsky.social).
I just released Raycore.jl - a high-performance ray tracing engine for Julia with CPU and GPU support!
It will power a new photorealistic rendering backend for Makie.jl, but we made it modular and flexible to support any other use case
Full post: makie.org/website/blog...
#JuliaLang #RayTracing
It will power a new photorealistic rendering backend for Makie.jl, but we made it modular and flexible to support any other use case
Full post: makie.org/website/blog...
#JuliaLang #RayTracing
November 10, 2025 at 1:23 PM
I just released Raycore.jl - a high-performance ray tracing engine for Julia with CPU and GPU support!
It will power a new photorealistic rendering backend for Makie.jl, but we made it modular and flexible to support any other use case
Full post: makie.org/website/blog...
#JuliaLang #RayTracing
It will power a new photorealistic rendering backend for Makie.jl, but we made it modular and flexible to support any other use case
Full post: makie.org/website/blog...
#JuliaLang #RayTracing
Reposted by Simon Danisch
Would you or your colleague like to improve the performance of your data analysis? Then please join us at our @julialang.org workshop at the 247th @aas.org meeting on Jan 3, 2026 in Phoenix, AZ. The regular registration deadline is Nov 7.
aas.org/meetings/aas...
#aas247 #JuliaLang #astrocode
aas.org/meetings/aas...
#aas247 #JuliaLang #astrocode
AAS 247: Registration | American Astronomical Society
aas.org
October 29, 2025 at 3:55 PM
Would you or your colleague like to improve the performance of your data analysis? Then please join us at our @julialang.org workshop at the 247th @aas.org meeting on Jan 3, 2026 in Phoenix, AZ. The regular registration deadline is Nov 7.
aas.org/meetings/aas...
#aas247 #JuliaLang #astrocode
aas.org/meetings/aas...
#aas247 #JuliaLang #astrocode
BonitoBook October update: plugin system + much faster loading!
New plugin system lets you customize notebook rendering completely. Check out slideshow, draggable layouts & more: bonitobook.org/website/exam...
Details: bonitobook.org/website/blog...
New plugin system lets you customize notebook rendering completely. Check out slideshow, draggable layouts & more: bonitobook.org/website/exam...
Details: bonitobook.org/website/blog...
October 13, 2025 at 3:49 PM
BonitoBook October update: plugin system + much faster loading!
New plugin system lets you customize notebook rendering completely. Check out slideshow, draggable layouts & more: bonitobook.org/website/exam...
Details: bonitobook.org/website/blog...
New plugin system lets you customize notebook rendering completely. Check out slideshow, draggable layouts & more: bonitobook.org/website/exam...
Details: bonitobook.org/website/blog...
Reposted by Simon Danisch
Der Angriff läuft. Demokratiefeinde wollen an die Macht.
Unsere größte Aktion läuft – und sie braucht Unterstützung.
Weniger als 1 % unserer Follower haben bisher gespendet.
Wir glauben, dass noch viel mehr geht.
👉 Werde jetzt Teil unserer größten Spendenaktion – für eine starke #Demokratie.
Unsere größte Aktion läuft – und sie braucht Unterstützung.
Weniger als 1 % unserer Follower haben bisher gespendet.
Wir glauben, dass noch viel mehr geht.
👉 Werde jetzt Teil unserer größten Spendenaktion – für eine starke #Demokratie.
Der Angriff läuft. – Spende jetzt. Enthülle ihre Pläne.
Demokratiefeinde wollen an die Macht. Wir müssen dringend handeln. Werde Teil unserer größten Spendenaktion – nur 4 Wochen!
correctiv.link
October 8, 2025 at 11:30 AM
Der Angriff läuft. Demokratiefeinde wollen an die Macht.
Unsere größte Aktion läuft – und sie braucht Unterstützung.
Weniger als 1 % unserer Follower haben bisher gespendet.
Wir glauben, dass noch viel mehr geht.
👉 Werde jetzt Teil unserer größten Spendenaktion – für eine starke #Demokratie.
Unsere größte Aktion läuft – und sie braucht Unterstützung.
Weniger als 1 % unserer Follower haben bisher gespendet.
Wir glauben, dass noch viel mehr geht.
👉 Werde jetzt Teil unserer größten Spendenaktion – für eine starke #Demokratie.
Finally announcing Bonito.jl! 🎉 A Julia web framework that went from "neglected prototype" to something I'm genuinely proud of.
Reactive UIs, rich widgets, Makie integration, deploy anywhere (Jupyter/VSCode/web/static HTML)
makie.org/website/blog...
Reactive UIs, rich widgets, Makie integration, deploy anywhere (Jupyter/VSCode/web/static HTML)
makie.org/website/blog...
October 7, 2025 at 11:46 AM
Finally announcing Bonito.jl! 🎉 A Julia web framework that went from "neglected prototype" to something I'm genuinely proud of.
Reactive UIs, rich widgets, Makie integration, deploy anywhere (Jupyter/VSCode/web/static HTML)
makie.org/website/blog...
Reactive UIs, rich widgets, Makie integration, deploy anywhere (Jupyter/VSCode/web/static HTML)
makie.org/website/blog...
Reposted by Simon Danisch
Software enthusiasts of all fields and backgrounds, unite! Here's the exciting schedule we cooked up for #JuliaCon Local Paris 2025 (the one for #PyData is just as thrilling!).
Get your tickets while you can, and see you in a month ⌛
@julialang.org @juliacon.bsky.social @pydataparis.bsky.social
Get your tickets while you can, and see you in a month ⌛
@julialang.org @juliacon.bsky.social @pydataparis.bsky.social
September 4, 2025 at 11:37 AM
Software enthusiasts of all fields and backgrounds, unite! Here's the exciting schedule we cooked up for #JuliaCon Local Paris 2025 (the one for #PyData is just as thrilling!).
Get your tickets while you can, and see you in a month ⌛
@julialang.org @juliacon.bsky.social @pydataparis.bsky.social
Get your tickets while you can, and see you in a month ⌛
@julialang.org @juliacon.bsky.social @pydataparis.bsky.social
I’m happy to announce BonitoBook, a Jupyter alternative with a focus on plotting, customizability, dashboards and AI integration.
Visit the website to learn more:
bonitobook.org
Or the repository:
github.com/SimonDanisch...
Visit the website to learn more:
bonitobook.org
Or the repository:
github.com/SimonDanisch...
August 7, 2025 at 11:57 AM
I’m happy to announce BonitoBook, a Jupyter alternative with a focus on plotting, customizability, dashboards and AI integration.
Visit the website to learn more:
bonitobook.org
Or the repository:
github.com/SimonDanisch...
Visit the website to learn more:
bonitobook.org
Or the repository:
github.com/SimonDanisch...
Reposted by Simon Danisch
Need your #code to be faster but don’t want to use Fortran or C? Learn #Julia, the modern language for #HPC, with a high-quality book. Here are some options:
lee-phillips.org/amazonJuliaB...
#julialang - its speed and friendly syntax is taking it beyond #science into #finance and other areas.
lee-phillips.org/amazonJuliaB...
#julialang - its speed and friendly syntax is taking it beyond #science into #finance and other areas.
July 11, 2025 at 3:07 AM
Need your #code to be faster but don’t want to use Fortran or C? Learn #Julia, the modern language for #HPC, with a high-quality book. Here are some options:
lee-phillips.org/amazonJuliaB...
#julialang - its speed and friendly syntax is taking it beyond #science into #finance and other areas.
lee-phillips.org/amazonJuliaB...
#julialang - its speed and friendly syntax is taking it beyond #science into #finance and other areas.
Reposted by Simon Danisch
After half a year of hobby #hacking, got an eink interface working w #julialang! 🎉
Now: tidy code & docs @ github.com/TheCedarPrin...
Future: custom dashboard making via @makie.org for
- UV Index 🌞
- Boston Sailing Info ⛵
- todo.txt Todo List 📝
- Google Calendar 🗓️
- 🤯
#maker #raspberrypi
Now: tidy code & docs @ github.com/TheCedarPrin...
Future: custom dashboard making via @makie.org for
- UV Index 🌞
- Boston Sailing Info ⛵
- todo.txt Todo List 📝
- Google Calendar 🗓️
- 🤯
#maker #raspberrypi
July 8, 2025 at 8:13 PM
After half a year of hobby #hacking, got an eink interface working w #julialang! 🎉
Now: tidy code & docs @ github.com/TheCedarPrin...
Future: custom dashboard making via @makie.org for
- UV Index 🌞
- Boston Sailing Info ⛵
- todo.txt Todo List 📝
- Google Calendar 🗓️
- 🤯
#maker #raspberrypi
Now: tidy code & docs @ github.com/TheCedarPrin...
Future: custom dashboard making via @makie.org for
- UV Index 🌞
- Boston Sailing Info ⛵
- todo.txt Todo List 📝
- Google Calendar 🗓️
- 🤯
#maker #raspberrypi
Reposted by Simon Danisch
Makie v0.24 is finally out! This release features a large refactor of the internals. This helped us achieve major performance improvements, better handling of multiple attribute updates, and improved correctness and maintainability. Read all about it in the blogpost:
makie.org/website/blog...
makie.org/website/blog...
June 25, 2025 at 3:52 PM
Makie v0.24 is finally out! This release features a large refactor of the internals. This helped us achieve major performance improvements, better handling of multiple attribute updates, and improved correctness and maintainability. Read all about it in the blogpost:
makie.org/website/blog...
makie.org/website/blog...
Reposted by Simon Danisch
We're happy to release Makie v0.23! This version features a new dendrogram recipe, a breaking cleanup of the arrow recipe, and many other improvements.
Read about all the details in our blogpost: makie.org/website/blog...
Read about all the details in our blogpost: makie.org/website/blog...
June 20, 2025 at 5:13 PM
We're happy to release Makie v0.23! This version features a new dendrogram recipe, a breaking cleanup of the arrow recipe, and many other improvements.
Read about all the details in our blogpost: makie.org/website/blog...
Read about all the details in our blogpost: makie.org/website/blog...
Reposted by Simon Danisch
🚨 We're hiring a Bioinformatics Engineer!
🛠️ Develop #JuliaLang & Python tools to model structural and evolutionary features of IDPs
📅 Start: 1 Sept 2025
🎓 3+ years of higher education (Master’s or engineering diploma preferred)
👉 Apply now: emploi.cnrs.fr/Offres/CDD/U...
🛠️ Develop #JuliaLang & Python tools to model structural and evolutionary features of IDPs
📅 Start: 1 Sept 2025
🎓 3+ years of higher education (Master’s or engineering diploma preferred)
👉 Apply now: emploi.cnrs.fr/Offres/CDD/U...
Portail Emploi CNRS - Offre d'emploi - Ingénieur bioinformaticien – Analyse computationnelle des protéines intrinsèquement désordonnées (H/F)
emploi.cnrs.fr
June 13, 2025 at 11:12 AM
🚨 We're hiring a Bioinformatics Engineer!
🛠️ Develop #JuliaLang & Python tools to model structural and evolutionary features of IDPs
📅 Start: 1 Sept 2025
🎓 3+ years of higher education (Master’s or engineering diploma preferred)
👉 Apply now: emploi.cnrs.fr/Offres/CDD/U...
🛠️ Develop #JuliaLang & Python tools to model structural and evolutionary features of IDPs
📅 Start: 1 Sept 2025
🎓 3+ years of higher education (Master’s or engineering diploma preferred)
👉 Apply now: emploi.cnrs.fr/Offres/CDD/U...
Reposted by Simon Danisch
Interested in a postdoc position combining computational protein design and molecular simulation? There is an open position in my group at the MRC-LMB in Cambridge, UK.
www.nature.com/naturecareer...
Feel free to message me with any questions.
www.nature.com/naturecareer...
Feel free to message me with any questions.
Postdoctoral Scientist - Structural Studies - Dr Joe Greener - LMB 2633 - Cambridgeshire job with MRC Laboratory of Molecular Biology (LMB) | 12840475
Postdoctoral Scientist Salary £41,344 per annum Fixed Term – 3 years MRC Laboratory of Molecular Biology, Cambridge, UK We are looking for a postd...
www.nature.com
June 16, 2025 at 10:47 AM
Interested in a postdoc position combining computational protein design and molecular simulation? There is an open position in my group at the MRC-LMB in Cambridge, UK.
www.nature.com/naturecareer...
Feel free to message me with any questions.
www.nature.com/naturecareer...
Feel free to message me with any questions.
Reposted by Simon Danisch
We tried to set up a simple demo/tutorial model for the protein design ecosystem we've been developing, and it turned out a bit more interesting than we expected. 🧵
This was a team effort from a few people in my lab, including @antonoresten.bsky.social and others (not sure who is on this app)
This was a team effort from a few people in my lab, including @antonoresten.bsky.social and others (not sure who is on this app)
June 13, 2025 at 5:06 PM
We tried to set up a simple demo/tutorial model for the protein design ecosystem we've been developing, and it turned out a bit more interesting than we expected. 🧵
This was a team effort from a few people in my lab, including @antonoresten.bsky.social and others (not sure who is on this app)
This was a team effort from a few people in my lab, including @antonoresten.bsky.social and others (not sure who is on this app)
Reposted by Simon Danisch
WaterLily 1.4 is out! github.com/WaterLily-jl...
Biggest updates to our pure @julialang.org flow solver since 1.3:
1. Ability to add explicit turbulence modelling
2. Easier flow visualization with @makie.org
3. Even faster CPU performance
Biggest updates to our pure @julialang.org flow solver since 1.3:
1. Ability to add explicit turbulence modelling
2. Easier flow visualization with @makie.org
3. Even faster CPU performance
GitHub - WaterLily-jl/WaterLily.jl: Fast and simple fluid simulator in Julia
Fast and simple fluid simulator in Julia. Contribute to WaterLily-jl/WaterLily.jl development by creating an account on GitHub.
github.com
June 3, 2025 at 6:21 PM
WaterLily 1.4 is out! github.com/WaterLily-jl...
Biggest updates to our pure @julialang.org flow solver since 1.3:
1. Ability to add explicit turbulence modelling
2. Easier flow visualization with @makie.org
3. Even faster CPU performance
Biggest updates to our pure @julialang.org flow solver since 1.3:
1. Ability to add explicit turbulence modelling
2. Easier flow visualization with @makie.org
3. Even faster CPU performance
Reposted by Simon Danisch
CUDA.jl 5.8 adds broadcasting for CuSparseVector, support for CUDA 12.9, and key library updates—making it easier to write efficient, element-wise #GPU operations in Julia without sacrificing clarity or #performance. juliagpu.org/post/2025-05... #JuliaLang #CUDA #GPUcomputing #programming
June 3, 2025 at 7:21 PM
CUDA.jl 5.8 adds broadcasting for CuSparseVector, support for CUDA 12.9, and key library updates—making it easier to write efficient, element-wise #GPU operations in Julia without sacrificing clarity or #performance. juliagpu.org/post/2025-05... #JuliaLang #CUDA #GPUcomputing #programming
Reposted by Simon Danisch
My lab, at Karolinska, in Stockholm, is looking for a PhD student with a computational/quantitative background to work on probabilistic/generative models of proteins (structure and sequence). The research will involve methods development, and applications in vaccine design.
May 15, 2025 at 1:21 PM
My lab, at Karolinska, in Stockholm, is looking for a PhD student with a computational/quantitative background to work on probabilistic/generative models of proteins (structure and sequence). The research will involve methods development, and applications in vaccine design.
Reposted by Simon Danisch
🥳 New Unfold-Family documentation page!
unfoldtoolbox.github.io/UnfoldDocs/m...
A unified look, comparison to others, and some global perspective - check it out for #rERP & #EEG analyses!
---
A good time to learn Unfold is this Friday:
Free online Unfold workshop - www.s-ccs.de/workshop_unf...
🧠🧪
unfoldtoolbox.github.io/UnfoldDocs/m...
A unified look, comparison to others, and some global perspective - check it out for #rERP & #EEG analyses!
---
A good time to learn Unfold is this Friday:
Free online Unfold workshop - www.s-ccs.de/workshop_unf...
🧠🧪
May 5, 2025 at 11:21 AM
🥳 New Unfold-Family documentation page!
unfoldtoolbox.github.io/UnfoldDocs/m...
A unified look, comparison to others, and some global perspective - check it out for #rERP & #EEG analyses!
---
A good time to learn Unfold is this Friday:
Free online Unfold workshop - www.s-ccs.de/workshop_unf...
🧠🧪
unfoldtoolbox.github.io/UnfoldDocs/m...
A unified look, comparison to others, and some global perspective - check it out for #rERP & #EEG analyses!
---
A good time to learn Unfold is this Friday:
Free online Unfold workshop - www.s-ccs.de/workshop_unf...
🧠🧪
Reposted by Simon Danisch
‼ Announcement: Online Unfold.jl workshop ‼
📅 09.05.2025
💶 Free!
👉🏼 www.s-ccs.de/workshop_unf...
❓ rERPs, mass univariate models & deconvolution!
#EEG #linearmodels #statistics @julialang.org #julia
Organized with Romy Frömer @thechbh.bsky.social
and the S-CCS lab @unistuttgart.bsky.social
📅 09.05.2025
💶 Free!
👉🏼 www.s-ccs.de/workshop_unf...
❓ rERPs, mass univariate models & deconvolution!
#EEG #linearmodels #statistics @julialang.org #julia
Organized with Romy Frömer @thechbh.bsky.social
and the S-CCS lab @unistuttgart.bsky.social
May 5, 2025 at 11:23 AM
Reposted by Simon Danisch
Wenn es nach CDU/CSU geht, sollen in Deutschland bald Atomkraftwerke und Fusionsreaktoren Strom liefern. Aber wie realistisch ist das? Ein Blick zu den jüngsten nuklearen Projekten zeigt: Atomstrom ist unberechenbar – bei den Kosten und Bauzeiten.
Kernkraft: Der teure Traum der Union
Die Union und Friedrich Merz wollen zurück zu Atomkraft. Über die hohen Kosten und langwierigen Bauzeiten wird nicht gesprochen.
correctiv.org
April 4, 2025 at 7:06 AM
Wenn es nach CDU/CSU geht, sollen in Deutschland bald Atomkraftwerke und Fusionsreaktoren Strom liefern. Aber wie realistisch ist das? Ein Blick zu den jüngsten nuklearen Projekten zeigt: Atomstrom ist unberechenbar – bei den Kosten und Bauzeiten.
Reposted by Simon Danisch
Recently found: an introduction to TidierPlots.jl on YouTube Ho cool is that?! Check it out!
www.youtube.com/watch?v=YRm2...
www.youtube.com/watch?v=YRm2...
ggplot of Julia Language
YouTube video by Numeryst
www.youtube.com
February 9, 2025 at 11:16 PM
Recently found: an introduction to TidierPlots.jl on YouTube Ho cool is that?! Check it out!
www.youtube.com/watch?v=YRm2...
www.youtube.com/watch?v=YRm2...
Reposted by Simon Danisch
February 23, 2025 at 9:01 PM
Reposted by Simon Danisch
Makie v0.22.2 is here! From improved voxel rendering and pattern fixes to new #tutorials and #performance boosts, this update brings serious upgrades to your plotting workflow. makie.org/website/blog... #JuliaLang #Makie #DataVisualization #TechUpdate #Visualisation
March 25, 2025 at 2:07 PM
Makie v0.22.2 is here! From improved voxel rendering and pattern fixes to new #tutorials and #performance boosts, this update brings serious upgrades to your plotting workflow. makie.org/website/blog... #JuliaLang #Makie #DataVisualization #TechUpdate #Visualisation