Martin Schätz
@schatzcz.bsky.social
BioImage Analysis at Vinicna Microscopy Core Facility & assistant professor at UCT Prague focused on medical signal and image analysis. Spearheading the CzechBIAS.
Reposted by Martin Schätz
Martin Schatz @schatzcz.bsky.social giving an intro to QuPath to students of Instituto Mexicano del Seguro Social research units as part of his @embl.org @globalbioimaging.bsky.social job shadowing program.
September 17, 2025 at 5:33 PM
Martin Schatz @schatzcz.bsky.social giving an intro to QuPath to students of Instituto Mexicano del Seguro Social research units as part of his @embl.org @globalbioimaging.bsky.social job shadowing program.
Check out my recently published #ImageJ based #opensource tool. It helps clinicians quantify #COVID_19 lung damage from CT scans, providing a reproducible, semi-automatic #analysis crucial for diagnosis. And it works in restricted hospital computer environments! 🩺
Read more: doi.org/10.12688/f10...
Read more: doi.org/10.12688/f10...
F1000Research Article: Estimation of Covid-19 lungs damage based on computer tomography images analysis.
Read the latest article version by Martin Schätz, Olga Rubešová, Jan Mareš, David Girsa, Alan Spark, at F1000Research.
doi.org
September 1, 2025 at 5:57 PM
Check out my recently published #ImageJ based #opensource tool. It helps clinicians quantify #COVID_19 lung damage from CT scans, providing a reproducible, semi-automatic #analysis crucial for diagnosis. And it works in restricted hospital computer environments! 🩺
Read more: doi.org/10.12688/f10...
Read more: doi.org/10.12688/f10...
Reposted by Martin Schätz
Speaking of "couldn't have done it without", the amazing author team of @acorbat.bsky.social, @walthercg.bsky.social, @larual.bsky.social, Nick Condon, Alessandro Felder, @schatzcz.bsky.social, Bettina Schmerl, Ko Sugawara, Clara Prats, @ahklemm.bsky.social, @flevet.bsky.social, (...) 4/x
July 10, 2025 at 10:23 PM
Speaking of "couldn't have done it without", the amazing author team of @acorbat.bsky.social, @walthercg.bsky.social, @larual.bsky.social, Nick Condon, Alessandro Felder, @schatzcz.bsky.social, Bettina Schmerl, Ko Sugawara, Clara Prats, @ahklemm.bsky.social, @flevet.bsky.social, (...) 4/x
Reposted by Martin Schätz
Call 4 Help Pilot Event by GloBIAS, 22 Jan–5 Feb 2025! Offering life scientists a chance for hands-on guidance & support for #bioimage_analysis using Napari, Ilastik & CellProfiler.
💡 Details: www.globias.org/activities/c...
🔗 Sign up! Application until Friday 17 Jan: forms.gle/7hsJgramrFXB...
💡 Details: www.globias.org/activities/c...
🔗 Sign up! Application until Friday 17 Jan: forms.gle/7hsJgramrFXB...
https://forms.gle/7hsJgramrFXBzCjk6]
January 13, 2025 at 1:49 PM
Call 4 Help Pilot Event by GloBIAS, 22 Jan–5 Feb 2025! Offering life scientists a chance for hands-on guidance & support for #bioimage_analysis using Napari, Ilastik & CellProfiler.
💡 Details: www.globias.org/activities/c...
🔗 Sign up! Application until Friday 17 Jan: forms.gle/7hsJgramrFXB...
💡 Details: www.globias.org/activities/c...
🔗 Sign up! Application until Friday 17 Jan: forms.gle/7hsJgramrFXB...
Reposted by Martin Schätz
I don't think I saw this on social media at all: a bunch of very clever people (including our team) has put together a federated bioimage repository based on OME-Zarr with 500TB of data in 4 months! ome.github.io/ome2024-ngff...
November 10, 2024 at 6:38 PM
I don't think I saw this on social media at all: a bunch of very clever people (including our team) has put together a federated bioimage repository based on OME-Zarr with 500TB of data in 4 months! ome.github.io/ome2024-ngff...
Reposted by Martin Schätz
I made a BioImage Analysts Starter pack. Reachout if you're missing on it 🔬💻🌐
go.bsky.app/2hPEBDu
go.bsky.app/2hPEBDu
November 9, 2024 at 1:37 PM
I made a BioImage Analysts Starter pack. Reachout if you're missing on it 🔬💻🌐
go.bsky.app/2hPEBDu
go.bsky.app/2hPEBDu
Reposted by Martin Schätz
Our professor, Kjetil Rommetveit, is one of the speakers at this timely hybrid event. Tomorrow at 4pm CET, he will present the paper "(How) can you code rights and morality into digital infrastructures and AIs?" Scan the QR code below to read more and register🧪 🇪🇺 #PhilSci #philtech #STS #moralPhil
November 29, 2023 at 8:49 AM
Our professor, Kjetil Rommetveit, is one of the speakers at this timely hybrid event. Tomorrow at 4pm CET, he will present the paper "(How) can you code rights and morality into digital infrastructures and AIs?" Scan the QR code below to read more and register🧪 🇪🇺 #PhilSci #philtech #STS #moralPhil