Sambhawa Priya
@sambhawa.bsky.social
Chicago DFI Fellow at UChicago | host-microbiome interactions, machine learning | sambhawapriya.netlify.app
Pinned
Human immunodeficiency virus and antiretroviral therapies exert distinct influences across diverse gut microbiomes - Nature Microbiology
Metagenomic analysis of the gut microbiome of people with human immunodeficiency virus (HIV), from three distinct cohorts, revealed infection- and antiretroviral drug-linked alterations, which may con...
www.nature.com
A bit late to share this, but excited about our new Nature Microbiology paper on how HIV and its therapies shape the gut microbiome! Using metagenomes from Uganda, Botswana, and the US, we map gut microbiome shifts linking HIV, treatment & host health 🧵
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Resharing the thread on our recent paper exploring how HIV and antiretrovirals shape the gut microbiome across global cohorts 👇
A bit late to share this, but excited about our new Nature Microbiology paper on how HIV and its therapies shape the gut microbiome! Using metagenomes from Uganda, Botswana, and the US, we map gut microbiome shifts linking HIV, treatment & host health 🧵
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Human immunodeficiency virus and antiretroviral therapies exert distinct influences across diverse gut microbiomes - Nature Microbiology
Metagenomic analysis of the gut microbiome of people with human immunodeficiency virus (HIV), from three distinct cohorts, revealed infection- and antiretroviral drug-linked alterations, which may con...
www.nature.com
November 25, 2025 at 4:58 PM
Resharing the thread on our recent paper exploring how HIV and antiretrovirals shape the gut microbiome across global cohorts 👇
A bit late to share this, but excited about our new Nature Microbiology paper on how HIV and its therapies shape the gut microbiome! Using metagenomes from Uganda, Botswana, and the US, we map gut microbiome shifts linking HIV, treatment & host health 🧵
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Human immunodeficiency virus and antiretroviral therapies exert distinct influences across diverse gut microbiomes - Nature Microbiology
Metagenomic analysis of the gut microbiome of people with human immunodeficiency virus (HIV), from three distinct cohorts, revealed infection- and antiretroviral drug-linked alterations, which may con...
www.nature.com
November 21, 2025 at 11:01 PM
A bit late to share this, but excited about our new Nature Microbiology paper on how HIV and its therapies shape the gut microbiome! Using metagenomes from Uganda, Botswana, and the US, we map gut microbiome shifts linking HIV, treatment & host health 🧵
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Reposted by Sambhawa Priya
🧬 🦠 🏙️
Urban vs rural lifestyles create dramatically different gut microbiomes. But how do these different gut microbiomes affect the host?
Excited to share our new paper: www.biorxiv.org/content/10.1...
Urban vs rural lifestyles create dramatically different gut microbiomes. But how do these different gut microbiomes affect the host?
Excited to share our new paper: www.biorxiv.org/content/10.1...
November 5, 2025 at 2:04 AM
🧬 🦠 🏙️
Urban vs rural lifestyles create dramatically different gut microbiomes. But how do these different gut microbiomes affect the host?
Excited to share our new paper: www.biorxiv.org/content/10.1...
Urban vs rural lifestyles create dramatically different gut microbiomes. But how do these different gut microbiomes affect the host?
Excited to share our new paper: www.biorxiv.org/content/10.1...
Reposted by Sambhawa Priya
Proud of the latest edition of my free intro biostats book.
gitrepo: github.com/ybrandvain/b...
book: ybrandvain.github.io/biostats/
Not complete but at a good point to take a break, and I think its quite usable
dm me with comments , ideas etc
gitrepo: github.com/ybrandvain/b...
book: ybrandvain.github.io/biostats/
Not complete but at a good point to take a break, and I think its quite usable
dm me with comments , ideas etc
Applied Biostatistics
ybrandvain.github.io
October 24, 2025 at 2:33 PM
Proud of the latest edition of my free intro biostats book.
gitrepo: github.com/ybrandvain/b...
book: ybrandvain.github.io/biostats/
Not complete but at a good point to take a break, and I think its quite usable
dm me with comments , ideas etc
gitrepo: github.com/ybrandvain/b...
book: ybrandvain.github.io/biostats/
Not complete but at a good point to take a break, and I think its quite usable
dm me with comments , ideas etc
Reposted by Sambhawa Priya
Hey Yaniv Brandvain is not on Bluesky but his most recent biostats ebook is live ybrandvain.github.io/biostats/. His stats resources have been so helpful to me as I develop my own stats course, so check it out. Github repo here: github.com/ybrandvain/b...
Applied Biostatistics
ybrandvain.github.io
October 24, 2025 at 2:47 PM
Hey Yaniv Brandvain is not on Bluesky but his most recent biostats ebook is live ybrandvain.github.io/biostats/. His stats resources have been so helpful to me as I develop my own stats course, so check it out. Github repo here: github.com/ybrandvain/b...
Reposted by Sambhawa Priya
Thinking about a postdoc in microbiome science?
Our lab at the MPI for Biology (Tübingen) builds on the culture I established at Cornell: collaborative, creative, and internationally diverse. Postdocs lead their own projects with secure funding. Join us!
#PostdocJobs #HostMicrobe #AcademicJobs
Our lab at the MPI for Biology (Tübingen) builds on the culture I established at Cornell: collaborative, creative, and internationally diverse. Postdocs lead their own projects with secure funding. Join us!
#PostdocJobs #HostMicrobe #AcademicJobs
October 4, 2025 at 5:37 PM
Thinking about a postdoc in microbiome science?
Our lab at the MPI for Biology (Tübingen) builds on the culture I established at Cornell: collaborative, creative, and internationally diverse. Postdocs lead their own projects with secure funding. Join us!
#PostdocJobs #HostMicrobe #AcademicJobs
Our lab at the MPI for Biology (Tübingen) builds on the culture I established at Cornell: collaborative, creative, and internationally diverse. Postdocs lead their own projects with secure funding. Join us!
#PostdocJobs #HostMicrobe #AcademicJobs
Reposted by Sambhawa Priya
For #worldmicrobiomeday, re-sharing our recent Review by @pamferretti.bsky.social, Kelsey Johnson, @sambhawa.bsky.social & @blekhman.bsky.social on the 'Genomics of host–microbiome interactions in humans', which is free to read using this link: rdcu.be/etIRy
Genomics of host–microbiome interactions in humans
Nature Reviews Genetics - In this Review, Ferretti et al. discuss advances in our understanding of interactions between the human genome and the microbiome, including the effects of the microbiome...
rdcu.be
June 27, 2025 at 9:52 AM
For #worldmicrobiomeday, re-sharing our recent Review by @pamferretti.bsky.social, Kelsey Johnson, @sambhawa.bsky.social & @blekhman.bsky.social on the 'Genomics of host–microbiome interactions in humans', which is free to read using this link: rdcu.be/etIRy
Reposted by Sambhawa Priya
ICYMI: New online! Genomics of host–microbiome interactions in humans
Genomics of host–microbiome interactions in humans
Nature Reviews Genetics, Published online: 04 June 2025; doi:10.1038/s41576-025-00849-8In this Review, Ferretti et al. discuss advances in our understanding of interactions between the human genome and the microbiome, including the effects of the microbiome on host gene regulation.
www.nature.com
June 11, 2025 at 9:59 AM
ICYMI: New online! Genomics of host–microbiome interactions in humans
Just out in Nature Reviews Genetics!
From twin studies to microbiome GWAS to cutting-edge transcriptomics, we explore the cross-talk between our genes and the microbiome!
Fun working together with
@pamferretti.bsky.social @blekhman.bsky.social Kelsey Johnson
www.nature.com/articles/s41...
From twin studies to microbiome GWAS to cutting-edge transcriptomics, we explore the cross-talk between our genes and the microbiome!
Fun working together with
@pamferretti.bsky.social @blekhman.bsky.social Kelsey Johnson
www.nature.com/articles/s41...
Genomics of host–microbiome interactions in humans - Nature Reviews Genetics
In this Review, Ferretti et al. discuss advances in our understanding of interactions between the human genome and the microbiome, including the effects of the microbiome on host gene regulation.
www.nature.com
June 5, 2025 at 6:47 PM
Just out in Nature Reviews Genetics!
From twin studies to microbiome GWAS to cutting-edge transcriptomics, we explore the cross-talk between our genes and the microbiome!
Fun working together with
@pamferretti.bsky.social @blekhman.bsky.social Kelsey Johnson
www.nature.com/articles/s41...
From twin studies to microbiome GWAS to cutting-edge transcriptomics, we explore the cross-talk between our genes and the microbiome!
Fun working together with
@pamferretti.bsky.social @blekhman.bsky.social Kelsey Johnson
www.nature.com/articles/s41...
Reposted by Sambhawa Priya
📣 Happy to share our review on host-microbiome genomics!
We synthesize the growing field exploring interactions between human genetics and the microbiome, building a roadmap for mapping the dialogue between our genes and microbes
Out now in Nature Reviews Genetics👇
www.nature.com/articles/s41...
We synthesize the growing field exploring interactions between human genetics and the microbiome, building a roadmap for mapping the dialogue between our genes and microbes
Out now in Nature Reviews Genetics👇
www.nature.com/articles/s41...
June 4, 2025 at 11:02 PM
📣 Happy to share our review on host-microbiome genomics!
We synthesize the growing field exploring interactions between human genetics and the microbiome, building a roadmap for mapping the dialogue between our genes and microbes
Out now in Nature Reviews Genetics👇
www.nature.com/articles/s41...
We synthesize the growing field exploring interactions between human genetics and the microbiome, building a roadmap for mapping the dialogue between our genes and microbes
Out now in Nature Reviews Genetics👇
www.nature.com/articles/s41...
Reposted by Sambhawa Priya
Interested in microbiome GWAS and heritability studies? Check out our new Review in Nature Reviews Genetics! We explore key findings, challenges, and future directions of the field.
rdcu.be/epoRR
@blekhman.bsky.social @sambhawa.bsky.social and Dr. Kelsey Johnson.
rdcu.be/epoRR
@blekhman.bsky.social @sambhawa.bsky.social and Dr. Kelsey Johnson.
Genomics of host–microbiome interactions in humans
Nature Reviews Genetics - In this Review, Ferretti et al. discuss advances in our understanding of interactions between the human genome and the microbiome, including the effects of the microbiome...
rdcu.be
June 4, 2025 at 4:52 PM
Interested in microbiome GWAS and heritability studies? Check out our new Review in Nature Reviews Genetics! We explore key findings, challenges, and future directions of the field.
rdcu.be/epoRR
@blekhman.bsky.social @sambhawa.bsky.social and Dr. Kelsey Johnson.
rdcu.be/epoRR
@blekhman.bsky.social @sambhawa.bsky.social and Dr. Kelsey Johnson.
Reposted by Sambhawa Priya
Ever stuck choosing the right plot or trying to figure out how to make it look just right? My go-to resource is the R Graph Gallery (r-graph-gallery.com), which is full of examples and clear code for everything from scatterplots to Sankey diagrams! #dataviz #rstats #rladies
The R Graph Gallery – Help and inspiration for R charts
The R graph gallery displays hundreds of charts made with R, always providing the reproducible code.
r-graph-gallery.com
April 1, 2025 at 4:03 PM
Ever stuck choosing the right plot or trying to figure out how to make it look just right? My go-to resource is the R Graph Gallery (r-graph-gallery.com), which is full of examples and clear code for everything from scatterplots to Sankey diagrams! #dataviz #rstats #rladies
Reposted by Sambhawa Priya
The eternal question: should you focus on one problem for a very long time or is it more productive to bounce and work on many problems? David Baker says that both modes have been important in his career trajectory.
podcasts.apple.com/us/podcast/n... @nightsciencepod.bsky.social
podcasts.apple.com/us/podcast/n... @nightsciencepod.bsky.social
March 26, 2025 at 12:00 PM
The eternal question: should you focus on one problem for a very long time or is it more productive to bounce and work on many problems? David Baker says that both modes have been important in his career trajectory.
podcasts.apple.com/us/podcast/n... @nightsciencepod.bsky.social
podcasts.apple.com/us/podcast/n... @nightsciencepod.bsky.social
Reposted by Sambhawa Priya
These are challenging times for science, but I'm happy to share a bright moment: our work is on the cover of Cell today.
We built a compendium of human gut microbiomes integrating 168K worldwide samples, revealing patterns of microbiome variation across the globe
www.cell.com/cell/current...
We built a compendium of human gut microbiomes integrating 168K worldwide samples, revealing patterns of microbiome variation across the globe
www.cell.com/cell/current...
February 20, 2025 at 4:06 PM
These are challenging times for science, but I'm happy to share a bright moment: our work is on the cover of Cell today.
We built a compendium of human gut microbiomes integrating 168K worldwide samples, revealing patterns of microbiome variation across the globe
www.cell.com/cell/current...
We built a compendium of human gut microbiomes integrating 168K worldwide samples, revealing patterns of microbiome variation across the globe
www.cell.com/cell/current...
Reposted by Sambhawa Priya
We’re thrilled that our first paper on the Human Microbiome Compendium, an integrated dataset of over 168,000 uniformly processed human gut microbiome samples, is officially out today in Cell! @richabdill.com @blekhman.bsky.social www.cell.com/cell/fulltex...
Integration of 168,000 samples reveals global patterns of the human gut microbiome
The Human Microbiome Compendium is a unified database of publicly available human
gut microbiome 16S samples, built with the integrated data from hundreds of independent
projects. The compendium is us...
www.cell.com
January 22, 2025 at 5:58 PM
Reposted by Sambhawa Priya
Today we report a new compendium of human gut microbiomes with >168,000 samples
By analyzing this massive dataset, we discovered distinct microbiome patterns across the globe, and show we can predict where a person lives just from their gut bacteria
Now out in Cell:
www.cell.com/cell/fulltex...
By analyzing this massive dataset, we discovered distinct microbiome patterns across the globe, and show we can predict where a person lives just from their gut bacteria
Now out in Cell:
www.cell.com/cell/fulltex...
Integration of 168,000 samples reveals global patterns of the human gut microbiome
The Human Microbiome Compendium is a unified database of publicly available human
gut microbiome 16S samples, built with the integrated data from hundreds of independent
projects. The compendium is us...
www.cell.com
January 22, 2025 at 5:12 PM
Today we report a new compendium of human gut microbiomes with >168,000 samples
By analyzing this massive dataset, we discovered distinct microbiome patterns across the globe, and show we can predict where a person lives just from their gut bacteria
Now out in Cell:
www.cell.com/cell/fulltex...
By analyzing this massive dataset, we discovered distinct microbiome patterns across the globe, and show we can predict where a person lives just from their gut bacteria
Now out in Cell:
www.cell.com/cell/fulltex...