Physalia-courses@Online
@physaliacourses.bsky.social
We offer scientific training courses in #Bioinformatics #Genomics #ecology #evolution #python, #rstats, #dataviz #DataScience
https://www.physalia-courses.org/courses-workshops/
https://www.physalia-courses.org/courses-workshops/
Pinned
Most courses in December are now fully booked or have only a few seats remaining.
If you or your colleagues were planning to register, please secure your spot right away!
www.physalia-courses.org/courses-work...
#Phylogenomics #StructuralVariants #GAMs #Rstats #Genviz #MultiOmics #Bioinformatics
If you or your colleagues were planning to register, please secure your spot right away!
www.physalia-courses.org/courses-work...
#Phylogenomics #StructuralVariants #GAMs #Rstats #Genviz #MultiOmics #Bioinformatics
Learn the full GWAS workflow in our 5-day online course (26–30 Jan 2026) @oscargenomics.bsky.social
From study design to data analysis with R & Linux tools, gain hands-on skills to run your own GWAS.
#GWAS #Genetics #Bioinformatics
www.physalia-courses.org/courses-work...
From study design to data analysis with R & Linux tools, gain hands-on skills to run your own GWAS.
#GWAS #Genetics #Bioinformatics
www.physalia-courses.org/courses-work...
November 25, 2025 at 8:13 AM
Learn the full GWAS workflow in our 5-day online course (26–30 Jan 2026) @oscargenomics.bsky.social
From study design to data analysis with R & Linux tools, gain hands-on skills to run your own GWAS.
#GWAS #Genetics #Bioinformatics
www.physalia-courses.org/courses-work...
From study design to data analysis with R & Linux tools, gain hands-on skills to run your own GWAS.
#GWAS #Genetics #Bioinformatics
www.physalia-courses.org/courses-work...
Master #Quarto & transform your scientific work!
Join our 2-day online course with @mickael.canouil.fr to learn how to create reproducible, polished, multi-format documents with R/Python/Julia integration. Boost your workflow & impact!
www.physalia-courses.org/courses-work...
#Rstats #DataScience
Join our 2-day online course with @mickael.canouil.fr to learn how to create reproducible, polished, multi-format documents with R/Python/Julia integration. Boost your workflow & impact!
www.physalia-courses.org/courses-work...
#Rstats #DataScience
Mastering Quarto CLI: From Authoring to Publishing
5th-6th February 2026
www.physalia-courses.org
November 25, 2025 at 7:43 AM
Master #Quarto & transform your scientific work!
Join our 2-day online course with @mickael.canouil.fr to learn how to create reproducible, polished, multi-format documents with R/Python/Julia integration. Boost your workflow & impact!
www.physalia-courses.org/courses-work...
#Rstats #DataScience
Join our 2-day online course with @mickael.canouil.fr to learn how to create reproducible, polished, multi-format documents with R/Python/Julia integration. Boost your workflow & impact!
www.physalia-courses.org/courses-work...
#Rstats #DataScience
Registrations are now closed for the upcoming course on GAMs in R with @gsimpson.bsky.social
Thanks everyone and see you in December!
www.physalia-courses.org/courses-work...
#GAMs #Rstats #gratia #mgcv
Thanks everyone and see you in December!
www.physalia-courses.org/courses-work...
#GAMs #Rstats #gratia #mgcv
November 24, 2025 at 3:22 PM
Registrations are now closed for the upcoming course on GAMs in R with @gsimpson.bsky.social
Thanks everyone and see you in December!
www.physalia-courses.org/courses-work...
#GAMs #Rstats #gratia #mgcv
Thanks everyone and see you in December!
www.physalia-courses.org/courses-work...
#GAMs #Rstats #gratia #mgcv
🚀 Back for its 2nd edition!
The Manual Genome Curation course with Camilla Santos and Michael Paulini from the @sangerinstitute.bsky.social is happening again!
Letś level up our genome curation skills with two of the best in the field 🧬✨
www.physalia-courses.org/courses-work...
The Manual Genome Curation course with Camilla Santos and Michael Paulini from the @sangerinstitute.bsky.social is happening again!
Letś level up our genome curation skills with two of the best in the field 🧬✨
www.physalia-courses.org/courses-work...
November 24, 2025 at 2:49 PM
🚀 Back for its 2nd edition!
The Manual Genome Curation course with Camilla Santos and Michael Paulini from the @sangerinstitute.bsky.social is happening again!
Letś level up our genome curation skills with two of the best in the field 🧬✨
www.physalia-courses.org/courses-work...
The Manual Genome Curation course with Camilla Santos and Michael Paulini from the @sangerinstitute.bsky.social is happening again!
Letś level up our genome curation skills with two of the best in the field 🧬✨
www.physalia-courses.org/courses-work...
Our Single-cell RNA-seq with R and @bioconductor.bsky.social course is coming to an end!
A huge thanks to @almeidasilvaf.bsky.social and Jacques Serizay for delivering another fantastic edition.
Thank you to everyone who joined us this week — we wish you the best of luck with your projects!
A huge thanks to @almeidasilvaf.bsky.social and Jacques Serizay for delivering another fantastic edition.
Thank you to everyone who joined us this week — we wish you the best of luck with your projects!
November 21, 2025 at 5:18 PM
Our Single-cell RNA-seq with R and @bioconductor.bsky.social course is coming to an end!
A huge thanks to @almeidasilvaf.bsky.social and Jacques Serizay for delivering another fantastic edition.
Thank you to everyone who joined us this week — we wish you the best of luck with your projects!
A huge thanks to @almeidasilvaf.bsky.social and Jacques Serizay for delivering another fantastic edition.
Thank you to everyone who joined us this week — we wish you the best of luck with your projects!
🚀 Got genomics data? Want to turn it into stunning visuals with R? 🎨✨
Join our December course and master the art of genomic data visualization!
Don’t just analyse—make your data shine.
#Genomics #DataViz #RStats #Bioinformatics
www.physalia-courses.org/courses-work...
Join our December course and master the art of genomic data visualization!
Don’t just analyse—make your data shine.
#Genomics #DataViz #RStats #Bioinformatics
www.physalia-courses.org/courses-work...
Genomic Data Visualisation with R
15-17 Dember 2025
www.physalia-courses.org
November 21, 2025 at 3:01 PM
🚀 Got genomics data? Want to turn it into stunning visuals with R? 🎨✨
Join our December course and master the art of genomic data visualization!
Don’t just analyse—make your data shine.
#Genomics #DataViz #RStats #Bioinformatics
www.physalia-courses.org/courses-work...
Join our December course and master the art of genomic data visualization!
Don’t just analyse—make your data shine.
#Genomics #DataViz #RStats #Bioinformatics
www.physalia-courses.org/courses-work...
Thanks to @edzer.bsky.social and to all participants who joined us this week for the 3rd edition of the #SpatialStatistics with R course.
Thank you, everyone!
Thank you, everyone!
November 21, 2025 at 1:47 PM
Thanks to @edzer.bsky.social and to all participants who joined us this week for the 3rd edition of the #SpatialStatistics with R course.
Thank you, everyone!
Thank you, everyone!
Reposted by Physalia-courses@Online
Yes, ChatGPT can help you write #rstats code, but so can this old Wiki I created with example code used for common data wrangling needs. Who knows, you might find some gems in there.🤷♀️
github.com/Cghlewis/dat...
github.com/Cghlewis/dat...
Home
Functions used for wrangling education research data - Cghlewis/data-wrangling-functions
github.com
November 20, 2025 at 3:18 PM
Yes, ChatGPT can help you write #rstats code, but so can this old Wiki I created with example code used for common data wrangling needs. Who knows, you might find some gems in there.🤷♀️
github.com/Cghlewis/dat...
github.com/Cghlewis/dat...
🚨 If you want to learn how to interpret Hi-C maps, fix assembly errors, and produce high-quality chromosome-level genomes, this hands-on online course on Manual Genome Curation using PretextView online (24–28 Nov) is for you.
www.physalia-courses.org/courses-work...
www.physalia-courses.org/courses-work...
November 20, 2025 at 2:06 PM
🚨 If you want to learn how to interpret Hi-C maps, fix assembly errors, and produce high-quality chromosome-level genomes, this hands-on online course on Manual Genome Curation using PretextView online (24–28 Nov) is for you.
www.physalia-courses.org/courses-work...
www.physalia-courses.org/courses-work...
Reposted by Physalia-courses@Online
Join us on our 3 day (Dec 1-3) #workshop @physaliacourses.bsky.social teaching about Structural Variant detection from short and long reads. We will give insights into different approaches to detect SV from somatic to population scale. Only a few places left: www.physalia-courses.org/courses-work...
Structural Variant detection and comparison
1-3 December 2025 To foster international participation, this course will be held online
www.physalia-courses.org
November 20, 2025 at 11:33 AM
Join us on our 3 day (Dec 1-3) #workshop @physaliacourses.bsky.social teaching about Structural Variant detection from short and long reads. We will give insights into different approaches to detect SV from somatic to population scale. Only a few places left: www.physalia-courses.org/courses-work...
Join our online course “Academic Paper Writing: Producing a First Draft” with Prof. Volker Grimm, 12–14 January 2026.
Learn how to structure, draft, and refine your manuscript with practical exercises and speed-writing sprints.
www.physalia-courses.org/courses-work...
Learn how to structure, draft, and refine your manuscript with practical exercises and speed-writing sprints.
www.physalia-courses.org/courses-work...
Academic Paper Writing: Producing a First Draft of Your Paper
12-14 January 2026
www.physalia-courses.org
November 20, 2025 at 10:53 AM
Join our online course “Academic Paper Writing: Producing a First Draft” with Prof. Volker Grimm, 12–14 January 2026.
Learn how to structure, draft, and refine your manuscript with practical exercises and speed-writing sprints.
www.physalia-courses.org/courses-work...
Learn how to structure, draft, and refine your manuscript with practical exercises and speed-writing sprints.
www.physalia-courses.org/courses-work...
Reposted by Physalia-courses@Online
PhD opportunity: MOVE
Details: blogs.reading.ac.uk/crocus-dla/c...
Deadline: 12/01/26
Supervisors: @shoalgroup.bsky.social, @inesfuertbauer.bsky.social, @wlallen.bsky.social, @nhcooper123.bsky.social, @marinapapa.bsky.social
Apply: blogs.reading.ac.uk/crocus-dla/p...
Details: blogs.reading.ac.uk/crocus-dla/c...
Deadline: 12/01/26
Supervisors: @shoalgroup.bsky.social, @inesfuertbauer.bsky.social, @wlallen.bsky.social, @nhcooper123.bsky.social, @marinapapa.bsky.social
Apply: blogs.reading.ac.uk/crocus-dla/p...
November 20, 2025 at 9:09 AM
PhD opportunity: MOVE
Details: blogs.reading.ac.uk/crocus-dla/c...
Deadline: 12/01/26
Supervisors: @shoalgroup.bsky.social, @inesfuertbauer.bsky.social, @wlallen.bsky.social, @nhcooper123.bsky.social, @marinapapa.bsky.social
Apply: blogs.reading.ac.uk/crocus-dla/p...
Details: blogs.reading.ac.uk/crocus-dla/c...
Deadline: 12/01/26
Supervisors: @shoalgroup.bsky.social, @inesfuertbauer.bsky.social, @wlallen.bsky.social, @nhcooper123.bsky.social, @marinapapa.bsky.social
Apply: blogs.reading.ac.uk/crocus-dla/p...
Most courses in December are now fully booked or have only a few seats remaining.
If you or your colleagues were planning to register, please secure your spot right away!
www.physalia-courses.org/courses-work...
#Phylogenomics #StructuralVariants #GAMs #Rstats #Genviz #MultiOmics #Bioinformatics
If you or your colleagues were planning to register, please secure your spot right away!
www.physalia-courses.org/courses-work...
#Phylogenomics #StructuralVariants #GAMs #Rstats #Genviz #MultiOmics #Bioinformatics
November 19, 2025 at 3:44 PM
Most courses in December are now fully booked or have only a few seats remaining.
If you or your colleagues were planning to register, please secure your spot right away!
www.physalia-courses.org/courses-work...
#Phylogenomics #StructuralVariants #GAMs #Rstats #Genviz #MultiOmics #Bioinformatics
If you or your colleagues were planning to register, please secure your spot right away!
www.physalia-courses.org/courses-work...
#Phylogenomics #StructuralVariants #GAMs #Rstats #Genviz #MultiOmics #Bioinformatics
Join our online course (23-26 Mar 2026) on Machine & Deep Learning in #PopulationGenomics & #Phylogeography! Learn to simulate genetic data, apply CNNs for demographic inference & detect selection signals.
www.physalia-courses.org/courses-work...
#AI #MachineLearning #DeepLearning
www.physalia-courses.org/courses-work...
#AI #MachineLearning #DeepLearning
Machine and Deep Learning methods in population genomics and phylogeography
23-26 March 2026 To foster international participation, this course will be held online
www.physalia-courses.org
November 19, 2025 at 2:29 PM
Join our online course (23-26 Mar 2026) on Machine & Deep Learning in #PopulationGenomics & #Phylogeography! Learn to simulate genetic data, apply CNNs for demographic inference & detect selection signals.
www.physalia-courses.org/courses-work...
#AI #MachineLearning #DeepLearning
www.physalia-courses.org/courses-work...
#AI #MachineLearning #DeepLearning
Reposted by Physalia-courses@Online
🚀 Back by popular demand!
The next edition of our Metabarcoding in Microbial Ecology online course is happening March 16–20 🧬
🔥 We’ve got a fantastic lineup of instructors:
✨Luigi Borruso, Anna Sandionigi,@fonamental.bsky.social @delcampolab.bsky.social @qiime2.org
shorturl.at/S52Qx
The next edition of our Metabarcoding in Microbial Ecology online course is happening March 16–20 🧬
🔥 We’ve got a fantastic lineup of instructors:
✨Luigi Borruso, Anna Sandionigi,@fonamental.bsky.social @delcampolab.bsky.social @qiime2.org
shorturl.at/S52Qx
Metabarcoding in microbial Ecology
www.physalia-courses.org
August 22, 2025 at 2:53 PM
🚀 Back by popular demand!
The next edition of our Metabarcoding in Microbial Ecology online course is happening March 16–20 🧬
🔥 We’ve got a fantastic lineup of instructors:
✨Luigi Borruso, Anna Sandionigi,@fonamental.bsky.social @delcampolab.bsky.social @qiime2.org
shorturl.at/S52Qx
The next edition of our Metabarcoding in Microbial Ecology online course is happening March 16–20 🧬
🔥 We’ve got a fantastic lineup of instructors:
✨Luigi Borruso, Anna Sandionigi,@fonamental.bsky.social @delcampolab.bsky.social @qiime2.org
shorturl.at/S52Qx
Reposted by Physalia-courses@Online
Out today, our take on 6-methyladenine #6mA evolution in Eukaryotes @natgenet.nature.com. We asked a simple question, is really DNA 6mA common across the eukaryotes? The answer is "yes" if you're a unicellular eukaryote 🦠, not so if you're multicellular 🐝🌱🍄. www.nature.com/articles/s41... 1/9
Adenine DNA methylation associated with transcriptionally permissive chromatin is widespread across eukaryotes - Nature Genetics
Long-read sequencing in 18 unicellular eukaryotes reveals that 6mA is widespread across eukaryotes and is enriched at transcriptionally permissive regions, which are also marked by H3K4me3.
www.nature.com
November 18, 2025 at 12:00 PM
Out today, our take on 6-methyladenine #6mA evolution in Eukaryotes @natgenet.nature.com. We asked a simple question, is really DNA 6mA common across the eukaryotes? The answer is "yes" if you're a unicellular eukaryote 🦠, not so if you're multicellular 🐝🌱🍄. www.nature.com/articles/s41... 1/9
Ancient #Metagenomics Course (Online) with @oskolkov.bsky.social: May 4-6, 2026. Master the aMeta workflow for degraded DNA. Deep dive into QC, authentication, and analysis of ancient microbial/environmental samples.
www.physalia-courses.org/courses-work...
#AncientDNA #Metagenomics #Bioinformatics
www.physalia-courses.org/courses-work...
#AncientDNA #Metagenomics #Bioinformatics
Ancient Metagenomics
4-6 May 2026 To foster international participation, this course will be held online
www.physalia-courses.org
November 18, 2025 at 3:59 PM
Ancient #Metagenomics Course (Online) with @oskolkov.bsky.social: May 4-6, 2026. Master the aMeta workflow for degraded DNA. Deep dive into QC, authentication, and analysis of ancient microbial/environmental samples.
www.physalia-courses.org/courses-work...
#AncientDNA #Metagenomics #Bioinformatics
www.physalia-courses.org/courses-work...
#AncientDNA #Metagenomics #Bioinformatics
Reposted by Physalia-courses@Online
We have done our first @protocolsio.bsky.social. Are you interested about #genome_annotation quality evaluation? We have developed a tool called #GAQET2 (github.com/victorgcb198...) which runs several tools like #AGAT, #BUSCO, and many other tools. You can find it at www.protocols.io/view/structu...
GitHub - victorgcb1987/GAQET2
Contribute to victorgcb1987/GAQET2 development by creating an account on GitHub.
github.com
November 18, 2025 at 2:52 PM
We have done our first @protocolsio.bsky.social. Are you interested about #genome_annotation quality evaluation? We have developed a tool called #GAQET2 (github.com/victorgcb198...) which runs several tools like #AGAT, #BUSCO, and many other tools. You can find it at www.protocols.io/view/structu...
Reposted by Physalia-courses@Online
Limited seats left for our online course on STRUCTURAL VARIANT DETECTION AND COMPARISON, Dec 1-3. Ideal for biologists & bioinformaticians. More info: https://www.physalia-courses.org/courses-workshops/svs/ #course
November 17, 2025 at 9:21 AM
Limited seats left for our online course on STRUCTURAL VARIANT DETECTION AND COMPARISON, Dec 1-3. Ideal for biologists & bioinformaticians. More info: https://www.physalia-courses.org/courses-workshops/svs/ #course
Want to build a solid stats foundation using R? Join our online Introduction to Statistics in R course with @philipleftwich.bsky.social, 19–23 Jan 2026! Perfect for beginners wanting hands-on practice and confidence in data analysis.
More info & registration: www.physalia-courses.org/courses-work...
More info & registration: www.physalia-courses.org/courses-work...
November 18, 2025 at 1:48 PM
Want to build a solid stats foundation using R? Join our online Introduction to Statistics in R course with @philipleftwich.bsky.social, 19–23 Jan 2026! Perfect for beginners wanting hands-on practice and confidence in data analysis.
More info & registration: www.physalia-courses.org/courses-work...
More info & registration: www.physalia-courses.org/courses-work...
🚀 Just started our R/Bioconductor for Mass Spectrometry and Proteomics course!
In this Day 1 attendees are exploring raw MS data — how mass spectrometry actually works, what raw data looks like, the key data formats, and hands-on skills to extract, manipulate, and visualize your data like a pro.
In this Day 1 attendees are exploring raw MS data — how mass spectrometry actually works, what raw data looks like, the key data formats, and hands-on skills to extract, manipulate, and visualize your data like a pro.
November 17, 2025 at 6:05 PM
🚀 Just started our R/Bioconductor for Mass Spectrometry and Proteomics course!
In this Day 1 attendees are exploring raw MS data — how mass spectrometry actually works, what raw data looks like, the key data formats, and hands-on skills to extract, manipulate, and visualize your data like a pro.
In this Day 1 attendees are exploring raw MS data — how mass spectrometry actually works, what raw data looks like, the key data formats, and hands-on skills to extract, manipulate, and visualize your data like a pro.
It is a real privilege to learn about #SpatialStatistics in R from Prof. Edzer Pebesma!
Participants over the next 5 days will learn spatial stats, sampling, geostatistics, regression, ML, and big-data methods.
www.physalia-courses.org/courses-work...
Participants over the next 5 days will learn spatial stats, sampling, geostatistics, regression, ML, and big-data methods.
www.physalia-courses.org/courses-work...
November 17, 2025 at 5:42 PM
It is a real privilege to learn about #SpatialStatistics in R from Prof. Edzer Pebesma!
Participants over the next 5 days will learn spatial stats, sampling, geostatistics, regression, ML, and big-data methods.
www.physalia-courses.org/courses-work...
Participants over the next 5 days will learn spatial stats, sampling, geostatistics, regression, ML, and big-data methods.
www.physalia-courses.org/courses-work...
We have started the course on #scRNAseq using R and @bioconductor.bsky.social with Jacques Serizay @almeidasilvaf.bsky.social & an international cohort of attendees working on very different cool projects.
#singlecell #RNAseq #Genomics #Bioinformatics
#singlecell #RNAseq #Genomics #Bioinformatics
November 17, 2025 at 5:20 PM
We have started the course on #scRNAseq using R and @bioconductor.bsky.social with Jacques Serizay @almeidasilvaf.bsky.social & an international cohort of attendees working on very different cool projects.
#singlecell #RNAseq #Genomics #Bioinformatics
#singlecell #RNAseq #Genomics #Bioinformatics