@jagan-l.bsky.social
Microbial bioinformatics, Interested in algorithms and data structures for bioinformatics
Reposted
New blog post with some thoughts on @nanoporetech.com and their recent announcement that the P2 Solo will be discontinued:
rrwick.github.io/2026/01/21/p...
rrwick.github.io/2026/01/21/p...
P2 Solo announcement and the trade-offs of a more stable ONT
a blog for miscellaneous bioinformatics stuff
rrwick.github.io
January 21, 2026 at 3:38 AM
New blog post with some thoughts on @nanoporetech.com and their recent announcement that the P2 Solo will be discontinued:
rrwick.github.io/2026/01/21/p...
rrwick.github.io/2026/01/21/p...
Reposted
I used to be a proto-mover.
Then, I read and wrote text files.
Wondering what's next.
www.reddit.com/r/bioinforma...
Then, I read and wrote text files.
Wondering what's next.
www.reddit.com/r/bioinforma...
May 15, 2025 at 2:03 PM
I used to be a proto-mover.
Then, I read and wrote text files.
Wondering what's next.
www.reddit.com/r/bioinforma...
Then, I read and wrote text files.
Wondering what's next.
www.reddit.com/r/bioinforma...
Reposted
💾 Shovill 1.4.1 has been released!
The best way to de novo assemble microbial genomes from Illumina FASTQ.
Major fixes to the SKESA module, plasmid mode for the Spades module, and more error checking.
#bioinformatiocs #genomics #microbiology
github.com/tseemann/sho...
The best way to de novo assemble microbial genomes from Illumina FASTQ.
Major fixes to the SKESA module, plasmid mode for the Spades module, and more error checking.
#bioinformatiocs #genomics #microbiology
github.com/tseemann/sho...
Releases · tseemann/shovill
⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads - tseemann/shovill
github.com
December 13, 2025 at 9:15 PM
💾 Shovill 1.4.1 has been released!
The best way to de novo assemble microbial genomes from Illumina FASTQ.
Major fixes to the SKESA module, plasmid mode for the Spades module, and more error checking.
#bioinformatiocs #genomics #microbiology
github.com/tseemann/sho...
The best way to de novo assemble microbial genomes from Illumina FASTQ.
Major fixes to the SKESA module, plasmid mode for the Spades module, and more error checking.
#bioinformatiocs #genomics #microbiology
github.com/tseemann/sho...