Jacob (Yaqub) Hanna - يعقوب حنا
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jacob-hanna.bsky.social
Jacob (Yaqub) Hanna - يعقوب حنا
@jacob-hanna.bsky.social
Palestinian Stem Cell Scientist. Palestinian and LQBTQ+ rights advocate. #Arab&BlackLivesMatter #EndOccupation #FreePalestine #PeaceNOW #CeasefireNOW #BringThemHomeNow! Personal account.
Super congrats dear Richard
August 27, 2025 at 7:38 PM
thank you dear luca for organizing this great meeting and having me. i had great time attending the fantastic diverse sessions and talks. I look forward for next one me and my lab embers would certainly become regular attendees.
August 14, 2025 at 11:54 AM
12/n last one (plenty more but u should get the point by now) - iEFCs=60h in Preprint are shown to have a mix of PrE/Epi/TE , while in Paper they are homogeneously labeled in Magenta?
August 12, 2025 at 6:45 AM
11/n in relation to the above concern, another panel of Paper in Fig.3F 32C ICM are marked (left) and according to this analysis on dataset used they also highly overlap with 16-Cell labeled in green? yet again why drown in scRNA-seq when immunostainings r so easy to solve this ?
August 12, 2025 at 6:44 AM
10/n some meta-analysis was done to claim iEFC fall on 8 cell. Upon close inspection - 8C and 32ICM r coloured similarly! and there is NO arrow pointing to 32ICM on the UMAP. it seems 32ICM cells are nicely overlapping with iEFCs? where is 64cell ICM? But again, simple scRNA-seq above says it all!
August 12, 2025 at 6:44 AM
9/n Straightforward scRNA-seq analysis of 60h=iEFC in Preprint also showed cells are not going backwards in development, but forward. Gata6+ cells express Sox17 and Pdgfra which are not 8-16cell markers but of good old E4.5 PrE cells.
August 12, 2025 at 6:43 AM
8/n Strangely straightforward scRNA-seq analysis of 60h=iEFC in Preprint showing rare CDX2/GATA6 coexpression & and that iEFC is basically a mix of Epi/PrE/TE, was NOT included in the published Paper although same dataset was used in both. & Nanog is reduced in TE-&PrE-like cells.
August 12, 2025 at 6:43 AM
7/n Preprint: 3/3 iEFC stainings show no/rare CDX2+/GATA6+ (include the same 2 above) and one in Preprint Fig1C, which was replaced in Paper Fig 1E with one that shows fuzzy coexpression. In sum 3 out of 4 immunostainings shown, rare CDX2/GATA6 co-expression!
August 12, 2025 at 6:42 AM