Mike Jetten
@msmjetten.bsky.social
880 followers 68 following 720 posts
Anammox, anaerobic microbiology, methane, nitrogen cycle, microbial ecology, KNVM, Mike Jetten Award, archaea, comammox, Methylomirabilis, Methanoperedens, denitrification, metagenomics, biogeochemistry, coastal ecosystems
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Reposted by Mike Jetten
jcamthrash.bsky.social
Dissolved oxygen concentrations influence microbial diversity, abundance and dominant players in an oxygen minimum zone www.biorxiv.org/content/10.1... #jcampubs
Reposted by Mike Jetten
jcamthrash.bsky.social
Microbial oxidation significantly reduces methane export from global groundwaters www.pnas.org/doi/abs/10.1... #jcampubs
Reposted by Mike Jetten
msmjetten.bsky.social
Pink powerhouses: insights into the multifaceted role of #Methylobacterium link.springer.com/article/10.1...
Reposted by Mike Jetten
jcamthrash.bsky.social
Metabolic capacity is maintained despite shifts in microbial diversity in estuary sediments academic.oup.com/ismecommun/a... #jcampubs
Reposted by Mike Jetten
woinactie.bsky.social
Kom 27 oktober samen het verkiezingsdebat kijken in Utrecht en kies voor onderwijs!

Come to Utrecht on Oct 27 to watch the election debate together and vote for education!
msmjetten.bsky.social
Isotopic Fractionation and Kinetic Isotope Effects of a Purified Bacterial #Nitric Oxide Reductase (NOR)
pubs.acs.org/doi/10.1021/...
Isotopic Fractionation and Kinetic Isotope Effects of a Purified Bacterial Nitric Oxide Reductase (NOR)
Nitrous oxide (N2O) is a serious concern due to its role in global warming and ozone destruction. Agricultural practices account for ∼80% of all anthropogenic N2O produced in the US, due in large part to the stimulation of microbial denitrification. Stable isotopes are uniquely suited to examine both microbial N2O sources and the mechanism of N2O biosynthesis through the use of Site Preference (δ15NSP; the difference in δ15N between the central and outer N atoms in N2O) and kinetic isotope effects (KIEs), respectively. Using trace gas isotope ratio mass spectrometry (TG-IRMS), we determined the δ15N, δ15Nα, δ15Nβ, and δ18O of N2O produced by a purified cytochrome c nitric oxide reductase (cNOR) from Paracoccus denitrificans. We also calculated δ15NSP, the KIEs, and associated isotopic enrichment factors (ε) for Nbulk, Nα, and Nβ. A normal isotope effect was observed for bulk 15N, with a KIE value of 1.0086 ± 0.0009 (ε = −8.6 ± 0.9‰). The isotope effects for both 15Nα and 15Nβ were also normal, with position-specific KIEs of 1.0072 ± 0.0010 (ε = −7.2 ± 1.0‰) and 1.0100 ± 0.0010 (ε = −9.9 ± 1.0‰), respectively, and δ15NSP values ranged from 0.5 to 8.7‰ with no significant trend as the reaction proceeded. Values of δ18O increased with N2O production (slope of δ18O against [−f ln f/(1 – f)] = −19.9 ± 1.9‰). We present implications for the mechanism of N2O production from cNOR based on our data.
pubs.acs.org
msmjetten.bsky.social
Identifying soil #N2O #nitrous oxide sources by combining laboratory experiments with process-based models
link.springer.com/article/10.1...
Identifying soil N2O sources by combining laboratory experiments with process-based models - Biogeochemistry
Nitrification and denitrification are two important biological processes producing N2O in soils, but their contributions to N2O emissions are not well understood, hindering precise mitigation measures. Here, we developed process-based models (PBM) with and without transport (T) to partition N2O sources by tracking nitrogen flows (NF) through different reaction pathways. The model with transport (PBM-T-NF) well predicted N2O production from nitrification and denitrification in two different repacked soils with a shallow depth of 8 mm under moisture conditions ranging from 40 to 100% water-filled pore space (WFPS), demonstrating its robustness and reliability. In comparison, the model without transport (PBM-NF) failed to capture the N2O dynamics and the relative contribution of denitrification to N2O production ( $${C}_{D}$$ C D ), highlighting the need of including mass transport in predicting N2O dynamics. The PBM-T-NF model was further employed to investigate the effects of soil properties on N2O emissions and sources. Increased NH4+ concentration significantly decreased $${C}_{D}$$ C D under relatively low moisture conditions, while increased NO3− slightly promoted $${C}_{D}$$ C D over different moisture contents, emphasizing the importance of substrate availability and moisture conditions in controlling $${C}_{D}$$ C D . Furthermore, the PBM-T-NF model was used to quantify N2O sources from an artificial soil core of 80 mm depth. Soil depth was shown to be important in mediating $${C}_{D}$$ C D by controlling O2 diffusivity, which is highly dependent on moisture content. Given the long-standing challenge in experimental quantification of N2O sources from soils, our developed model provides a novel way to estimate N2O production from different nitrogen processes, which is key for accurately targeting mitigation of N2O emissions from soils.
link.springer.com
msmjetten.bsky.social
#Methylocystis hydrogenophila sp. nov.—A Type IIa #Methanotrophic Bacterium Able to Utilize #Hydrogen as an Alternative Energy Source
www.mdpi.com/2076-2607/13...
Reposted by Mike Jetten
hormiga.bsky.social
Y'all. I just got ChatGPT to do everything in R for this manuscript. I mean EVERYTHING. And it's all legit and reproducible. I'm shook.

How are we mentoring our trainees in statistics now? Who needs to learn coding in R line by line, and who doesn't?

scienceforeveryone.science/statistics-i...
Statistics in the era of AI
How do we mentor, teach, and do stats when AI can do so much of the work?
scienceforeveryone.science
Reposted by Mike Jetten
jcamthrash.bsky.social
Extracellular electron transfer in cable bacteria enables growth rates comparable to aerobic respiration www.biorxiv.org/content/10.1... #jcampubs
Reposted by Mike Jetten
ianpgm.bsky.social
I'm recruiting a postdoc to figure out how aerobic methanotrophic bacteria oxidise methane in anoxic freshwater sediment environments: international.au.dk/about/profil... Come to Aarhus University in Denmark and work on this 2-year project funded by @villumfonden.bsky.social!
Postdoctoral position on methanotrophic bacteria - Vacancy at Aarhus University
Vacancy at Department of Biology - Microbiology, Aarhus University
international.au.dk