Mandhri Abeysooriya
@mandhriabe.bsky.social
Hi! I am a bioinformatician specialised in big data from Deakin University 🐙
I spent too much time automating pipelines and finding the connection btwn stats and data
#Bioinformatics #Genomics #BigData 🇦🇺
https://medium.com/@mandhri.abeysooriya
I spent too much time automating pipelines and finding the connection btwn stats and data
#Bioinformatics #Genomics #BigData 🇦🇺
https://medium.com/@mandhri.abeysooriya
Why Your Single-Cell Data Is not telling You the Truth.
Yesterday I ran three normalisation methods head-to-head on the Tung et al. 2017 iPSC scRNA-seq dataset (3 individuals, 864 cells).
The question is: Which method are YOU using?
medium.com/@mandhri.abe...
Yesterday I ran three normalisation methods head-to-head on the Tung et al. 2017 iPSC scRNA-seq dataset (3 individuals, 864 cells).
The question is: Which method are YOU using?
medium.com/@mandhri.abe...
Why Your Single-Cell Data Is not telling You the Truth
Yesterday I ran three normalisation methods head-to-head on the Tung et al. 2017 iPSC scRNA-seq dataset (3 individuals, 864 cells). I…
medium.com
July 14, 2025 at 6:41 AM
Why Your Single-Cell Data Is not telling You the Truth.
Yesterday I ran three normalisation methods head-to-head on the Tung et al. 2017 iPSC scRNA-seq dataset (3 individuals, 864 cells).
The question is: Which method are YOU using?
medium.com/@mandhri.abe...
Yesterday I ran three normalisation methods head-to-head on the Tung et al. 2017 iPSC scRNA-seq dataset (3 individuals, 864 cells).
The question is: Which method are YOU using?
medium.com/@mandhri.abe...
This one mistake costs research teams 40 hours per month!
The team was spending 40+ hours monthly waiting for "simple" reports to run. The problem was using REDCap for complex analytics.
The team was spending 40+ hours monthly waiting for "simple" reports to run. The problem was using REDCap for complex analytics.
July 14, 2025 at 2:26 AM
This one mistake costs research teams 40 hours per month!
The team was spending 40+ hours monthly waiting for "simple" reports to run. The problem was using REDCap for complex analytics.
The team was spending 40+ hours monthly waiting for "simple" reports to run. The problem was using REDCap for complex analytics.
Bypassing Boredom: How I Automated R Markdown Rendering to Outsmart Error Surprises!
#Bioinformatics #Rmarkdown #Automatingpipelines #datascience #genomics
medium.com/@mandhri.abe...
Streamlining R Markdown Rendering and Error Logging in R
Working with multiple R Markdown (.Rmd) files can be a routine task for data scientists and analysts. However, rendering each file…
medium.com
December 1, 2024 at 2:31 AM
Bypassing Boredom: How I Automated R Markdown Rendering to Outsmart Error Surprises!
#Bioinformatics #Rmarkdown #Automatingpipelines #datascience #genomics
medium.com/@mandhri.abe...
I love automating workflows—it's not just efficient and less error-prone; it feels like playing a game.
So, essentially, I'm gaming even when I'm working!
medium.com/@mandhri.abe...
So, essentially, I'm gaming even when I'm working!
medium.com/@mandhri.abe...
Oops! I Forgot the Cells: Updating Model Matrices with Cell Type Proportions Across 60+ Blood…
Automatically Updating Cell Type Proportions in Model Matrices Across A Large Number Of Files
medium.com
November 30, 2024 at 2:04 AM
I love automating workflows—it's not just efficient and less error-prone; it feels like playing a game.
So, essentially, I'm gaming even when I'm working!
medium.com/@mandhri.abe...
So, essentially, I'm gaming even when I'm working!
medium.com/@mandhri.abe...