Hiro Nakagami
@grandpahiro.bsky.social
2.1K followers 460 following 100 posts
PI@MPIPZ, Plant Immunity, EvoMPMI, Proteomics, Signal transduction, Phosphorylation https://www.mpipz.mpg.de/nakagami https://www.mpipz.mpg.de/MS
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Reposted by Hiro Nakagami
baptistebio.bsky.social
Exploring fern pathosystems and immune receptors to bridge gaps in plant immunity - BMC Biology
Land plants include angiosperms, gymnosperms, bryophytes, lycophytes, and ferns, each of which may deploy distinct strategies to resist pathogens. Here, we investigate fern-pathogen interactions by characterizing novel pathosystems and analyzing the diversity of fern immune receptors. A collection of fern species was inoculated with a diverse set of filamentous microbes, and disease symptoms were assessed. We further leveraged published genome mining tools to analyse the diversity of receptor-like kinases, receptor-like proteins (RLKs/RLPs) and nucleotide-binding and leucine-rich repeats (NLRs), along with key immune signalling components, in ferns. Our results reveal that ferns exhibit a range of responses to pathogens, including putative non-host resistance and more specific resistance mechanisms. Among ten ferns tested, Pteris vittata displays the broadest spectrum of pathogen compatibility. Genome mining indicates that ferns encode a diverse repertoire of putative immune receptors, antimicrobial peptides, and mediators of systemic acquired resistance. Ferns possess numerous RLKs/RLPs, resembling those required for cell-surface immunity in angiosperms. They also encode diverse NLRs, including sub-families lost in flowering plants. These findings provide insights into disease resistance evolution and open promising perspectives for crop protection strategies.
bmcbiol.biomedcentral.com
Reposted by Hiro Nakagami
keihiruma.bsky.social
We’re delighted to share that our paper has been just accepted in PCP!

We analyzed fungus–fungus competition that suppresses pathogenic colonization in Arabidopsis roots.Special thanks to Duke, Hiroyuki, Yuki, Nanami, and everyone who contributed!
t.co/obQyD1rzI1
https://academic.oup.com/pcp/article-abstract/doi/10.1093/pcp/pcaf126/8277635
t.co
Reposted by Hiro Nakagami
keihiruma.bsky.social
We are pleased to announce the release of our special issue, “Diverse Symbiotic Relationships between Plants and Microbes in the Phyllosphere and Rhizosphere,” now available in Plant Biotechnology (open access)!
www.jstage.jst.go.jp/browse/plant...
Plant Biotechnology, Volume 42, Issue 3
Published by Japanese Society for Plant Biotechnology. OPEN ACCESS
www.jstage.jst.go.jp
Reposted by Hiro Nakagami
biorxiv-plants.bsky.social
The Spirogyra genome: signatures of shared and divergent division and differentiation https://www.biorxiv.org/content/10.1101/2025.10.09.681428v1
grandpahiro.bsky.social
Very important add!
Congratulations to all!
rensingstefan.bsky.social
Very happy and proud to share the #Spirogyra genome: 50 Mbp small, lacking almost all plastid division proteins and many transcription factors. Kudos to all the many people involved in this multi year project!
@jandevries.bsky.social
@watertoland.bsky.social
www.biorxiv.org/content/10.1...
Reposted by Hiro Nakagami
rensingstefan.bsky.social
Very happy and proud to share the #Spirogyra genome: 50 Mbp small, lacking almost all plastid division proteins and many transcription factors. Kudos to all the many people involved in this multi year project!
@jandevries.bsky.social
@watertoland.bsky.social
www.biorxiv.org/content/10.1...
Reposted by Hiro Nakagami
slcuplants.bsky.social
Salicylic acid biosensor, SalicS1, tracks the plant immune hormone salicylic acid in real time - revealing propagation of hormone surge during plant pathogen advance

Latest biosensor from @xanderjones.bsky.social team
In Science doi.org/10.1126/scie...
Summary www.slcu.cam.ac.uk/news/new-bio...
Reposted by Hiro Nakagami
moodytomato.bsky.social
📢 To all molecular mossers 📢

The Moss Workshop will be held in (not always as sunny as this) Oxford next year (30th June until 2nd July 2026). More details will follow soon, but in the meantime please make a note of the dates 😃 👍
Reposted by Hiro Nakagami
jacquet-chris.bsky.social
Want to see ferns under attack and how they respond to pathogens? Check out our latest paper!
doi.org/10.1186/s129...
Congrats on this huge team effort to @baptistebio.bsky.social @madeleinebaker.bsky.social @kellerjeanphd.bsky.social @maximebonhomme.bsky.social @pierremarcdelaux.bsky.social
Various ferns species inoculated with S. sclerotiorum.
grandpahiro.bsky.social
I just noticed that the first sentence of my PhD thesis started with 高等植物(higher plants). It was 2000.
Reposted by Hiro Nakagami
watertoland.bsky.social
And last but not least, congratulations to all the winners of the best poster prize! 🏆 1st place: Lara Canovai (right) from Zachgo lab in Osnabrück, Diego Artigas Hernández from Müller-Schüssele lab in Kaiserslautern and Ellen Lorberg from @jandevries.bsky.social
lab in Göttingen #MAdLand2025
Reposted by Hiro Nakagami
watertoland.bsky.social
Congratulations to Elena Lesch from the Ischebeck lab @uni-muenster.de for the best Postdoc talk and winning the @theplantjournal.bsky.social award 🎉 #MAdLand2025 #plantsci
Reposted by Hiro Nakagami
watertoland.bsky.social
Congratulations to the winners of best PhD talk @ #MAdLand2025! 🏆 1st place: @hannahlepper.bsky.social from @franzificht.bsky.social lab, who won @theplantjournal.bsky.social award! Christoph Kentrath (left) from Petersen Lab in Marburg
& Tim Ruder (right) from Pfannschmidt lab in Hannover #plantsci
Reposted by Hiro Nakagami
plantcellphysiol.bsky.social
Read about the earlier grounding-breaking work on Casparian strip mutants by Durr et al. providing the first clues that root exudates influence the rhizosphere microbial community composition, here:
doi.org/10.1093/pcp/...
Reposted by Hiro Nakagami
maddyseale.bsky.social
Wonderful to see this beautiful image on the cover of Science this week highlighting a paper that uses high resolution imaging to show the spatial patterns of bacterial attraction to glutamine from roots.
Paper here: www.science.org/doi/10.1126/...
Perspective here: www.science.org/doi/10.1126/...
Reposted by Hiro Nakagami
natplants.nature.com
New Review : "Cross-kingdom mechanisms of trained immunity in plant systemic acquired resistance" rdcu.be/eJONL

Plant systemic acquired resistance and mammalian trained immunity share striking similarities, which are explored in this Review.
Reposted by Hiro Nakagami
natplants.nature.com
New Article: "Retrieval from vacuolar and endosomal compartments underpinning the neofunctionalization of SNARE in plants" rdcu.be/eJOWx

Retrograde trafficking route from the plant vacuole; sorting nexins retrieve the plant-specific SNARE VAMP727.
Reposted by Hiro Nakagami
filiphusnik.bsky.social
OIST is seeking up to four tenure-track or tenured faculty in Ecology, Environmental Science, Earth Science, and Oceanography. Application deadline: Oct 15. Please share. Thx!
www.oist.jp/careers/facu...
Reposted by Hiro Nakagami
theplantjournal.bsky.social
Meet the 𝐰𝐢𝐧𝐧𝐞𝐫𝐬 𝐨𝐟 𝟐𝟎𝟐𝟓 𝐓𝐏𝐉-𝐏𝐒𝐍𝐀 𝐀𝐰𝐚𝐫𝐝𝐬 🏆
This award recognizes outstanding postdocs and research scientists, with preference for early-career researchers ready to launch independent labs:
💠Ryo Yokoyama @yokoyama-ryo.bsky.social
💠 Boaz Negin
CONGRATULATIONS!

@psna-official.bsky.social
⬇️
Reposted by Hiro Nakagami
trujillolab.bsky.social
Big news! Our group has joined the University of Hamburg — we’re excited for the opportunities and collaborations ahead! #Hamburg