MuMu: a sample multiplexing protocol for droplet-based simultaneous single nuclei RNA- and ATAC-seq systems. #SingleNuclei #MultiplexingProtocol #10X #scRNAseq #scATACseq @biorxivpreprint.bsky.social
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
December 1, 2024 at 7:41 PM
MuMu: a sample multiplexing protocol for droplet-based simultaneous single nuclei RNA- and ATAC-seq systems. #SingleNuclei #MultiplexingProtocol #10X #scRNAseq #scATACseq @biorxivpreprint.bsky.social
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
#Atherosclerosis #FoamCell heterogeneity 2/2
Meta-analysis 37 scRNAseq libraries + 44 scATACseq datasets->
5 Foam cell states
ICAM1+ inflammatory
FOLR2+ phagocytic
MMP9+ matrix-remodeling
ANGPTL4+ hypoxic
COL1A2+ fibroblastic
#Biomol_MDPI 2024
www.mdpi.com/2218-273X/14...
Meta-analysis 37 scRNAseq libraries + 44 scATACseq datasets->
5 Foam cell states
ICAM1+ inflammatory
FOLR2+ phagocytic
MMP9+ matrix-remodeling
ANGPTL4+ hypoxic
COL1A2+ fibroblastic
#Biomol_MDPI 2024
www.mdpi.com/2218-273X/14...
September 7, 2025 at 12:57 PM
#Atherosclerosis #FoamCell heterogeneity 2/2
Meta-analysis 37 scRNAseq libraries + 44 scATACseq datasets->
5 Foam cell states
ICAM1+ inflammatory
FOLR2+ phagocytic
MMP9+ matrix-remodeling
ANGPTL4+ hypoxic
COL1A2+ fibroblastic
#Biomol_MDPI 2024
www.mdpi.com/2218-273X/14...
Meta-analysis 37 scRNAseq libraries + 44 scATACseq datasets->
5 Foam cell states
ICAM1+ inflammatory
FOLR2+ phagocytic
MMP9+ matrix-remodeling
ANGPTL4+ hypoxic
COL1A2+ fibroblastic
#Biomol_MDPI 2024
www.mdpi.com/2218-273X/14...
OmnibusX: A unified platform for accessible multi-omics analysis. #MultiOmics #DataAnalysis #RNAseq #scRNAseq #scATACseq #SpatialTranscriptomics #BMCcomputationalBiology
journals.plos.org/ploscompbiol...
journals.plos.org/ploscompbiol...
September 11, 2025 at 8:31 AM
OmnibusX: A unified platform for accessible multi-omics analysis. #MultiOmics #DataAnalysis #RNAseq #scRNAseq #scATACseq #SpatialTranscriptomics #BMCcomputationalBiology
journals.plos.org/ploscompbiol...
journals.plos.org/ploscompbiol...
6/
I also did early single-cell work—RNA-seq and ATAC-seq.
That experience paid off when I collaborated with Tao Liu, creator of MACS2 to work on scATACseq.
Tao was my hero during my PhD!
I also did early single-cell work—RNA-seq and ATAC-seq.
That experience paid off when I collaborated with Tao Liu, creator of MACS2 to work on scATACseq.
Tao was my hero during my PhD!
July 26, 2025 at 1:45 PM
6/
I also did early single-cell work—RNA-seq and ATAC-seq.
That experience paid off when I collaborated with Tao Liu, creator of MACS2 to work on scATACseq.
Tao was my hero during my PhD!
I also did early single-cell work—RNA-seq and ATAC-seq.
That experience paid off when I collaborated with Tao Liu, creator of MACS2 to work on scATACseq.
Tao was my hero during my PhD!
#SpatialOmics #MultiOMics
MaxFuse
Integration of spatial & single-cell data across modalities with weakly linked features
Fuzzy Smoothing
Iterative cycles of coembedding, graph-smoothing & matching
tri-omic scRNAseq scATACseq CODEX integration
#NatBiotech 2023
www.nature.com/articles/s41...
MaxFuse
Integration of spatial & single-cell data across modalities with weakly linked features
Fuzzy Smoothing
Iterative cycles of coembedding, graph-smoothing & matching
tri-omic scRNAseq scATACseq CODEX integration
#NatBiotech 2023
www.nature.com/articles/s41...
April 27, 2025 at 12:08 AM
#SpatialOmics #MultiOMics
MaxFuse
Integration of spatial & single-cell data across modalities with weakly linked features
Fuzzy Smoothing
Iterative cycles of coembedding, graph-smoothing & matching
tri-omic scRNAseq scATACseq CODEX integration
#NatBiotech 2023
www.nature.com/articles/s41...
MaxFuse
Integration of spatial & single-cell data across modalities with weakly linked features
Fuzzy Smoothing
Iterative cycles of coembedding, graph-smoothing & matching
tri-omic scRNAseq scATACseq CODEX integration
#NatBiotech 2023
www.nature.com/articles/s41...
5/ The Power of Single-Cell Experience
8 years ago, I worked on single-cell RNA-seq & ATAC-seq at Harvard FAS Informatics. At Dana-Farber, I collaborated with Tao Liu for scATACseq, creator of MACS2—the most popular peak caller. That experience was invaluable.
8 years ago, I worked on single-cell RNA-seq & ATAC-seq at Harvard FAS Informatics. At Dana-Farber, I collaborated with Tao Liu for scATACseq, creator of MACS2—the most popular peak caller. That experience was invaluable.
February 2, 2025 at 3:48 PM
5/ The Power of Single-Cell Experience
8 years ago, I worked on single-cell RNA-seq & ATAC-seq at Harvard FAS Informatics. At Dana-Farber, I collaborated with Tao Liu for scATACseq, creator of MACS2—the most popular peak caller. That experience was invaluable.
8 years ago, I worked on single-cell RNA-seq & ATAC-seq at Harvard FAS Informatics. At Dana-Farber, I collaborated with Tao Liu for scATACseq, creator of MACS2—the most popular peak caller. That experience was invaluable.
Integrated #scATACseq and #scRNAseq data reveals that ATF6 plays a pivotal role in maintaining the homeostasis of lens epithelial cells and facilitates EMT in epithelial cells by regulating p-STAT3 expression. #SecondaryCataracts #Cataracts #medsky
#OpenAccess: buff.ly/UXLfbrp
#OpenAccess: buff.ly/UXLfbrp
March 30, 2025 at 10:30 PM
Integrated #scATACseq and #scRNAseq data reveals that ATF6 plays a pivotal role in maintaining the homeostasis of lens epithelial cells and facilitates EMT in epithelial cells by regulating p-STAT3 expression. #SecondaryCataracts #Cataracts #medsky
#OpenAccess: buff.ly/UXLfbrp
#OpenAccess: buff.ly/UXLfbrp
Alevin-fry 0.11.0 was just released (last night). This speed up permit-list generation by making it multithreaded, but much more importantly, adds the `atac` command allowing barcode correction and counting & BED generation directly in the main branch of alevin-fry. 1/3 #scRNAseq #scATACseq
December 7, 2024 at 2:46 PM
Alevin-fry 0.11.0 was just released (last night). This speed up permit-list generation by making it multithreaded, but much more importantly, adds the `atac` command allowing barcode correction and counting & BED generation directly in the main branch of alevin-fry. 1/3 #scRNAseq #scATACseq
🚀 Sharing insights on ArchR, a powerful tool for single-cell chromatin accessibility analysis! 🎯 ArchR excels in large datasets and integrates scATACseq with scRNAseq for cutting-edge multi-modal studies.
🎥 Dive deeper with the video: youtu.be/XNZx5Dlp6jY?...
#Bioinformatics #10xGenomics #LIBD
🎥 Dive deeper with the video: youtu.be/XNZx5Dlp6jY?...
#Bioinformatics #10xGenomics #LIBD
[2024-12-11] ArchR journal club
YouTube video by Leonardo Collado Torres
youtu.be
December 12, 2024 at 3:01 PM
🚀 Sharing insights on ArchR, a powerful tool for single-cell chromatin accessibility analysis! 🎯 ArchR excels in large datasets and integrates scATACseq with scRNAseq for cutting-edge multi-modal studies.
🎥 Dive deeper with the video: youtu.be/XNZx5Dlp6jY?...
#Bioinformatics #10xGenomics #LIBD
🎥 Dive deeper with the video: youtu.be/XNZx5Dlp6jY?...
#Bioinformatics #10xGenomics #LIBD
We also saw a shift in TF activity.
Footprinting showed increased NFI binding, especially NFIB, in late-born cohorts. These neurons activate maturation modules faster — possibly guided by chromatin remodeling during neurogenesis.
#TFfootprints #TranscriptionFactors #scATACseq
(5/n)
Footprinting showed increased NFI binding, especially NFIB, in late-born cohorts. These neurons activate maturation modules faster — possibly guided by chromatin remodeling during neurogenesis.
#TFfootprints #TranscriptionFactors #scATACseq
(5/n)
July 8, 2025 at 12:04 PM
We also saw a shift in TF activity.
Footprinting showed increased NFI binding, especially NFIB, in late-born cohorts. These neurons activate maturation modules faster — possibly guided by chromatin remodeling during neurogenesis.
#TFfootprints #TranscriptionFactors #scATACseq
(5/n)
Footprinting showed increased NFI binding, especially NFIB, in late-born cohorts. These neurons activate maturation modules faster — possibly guided by chromatin remodeling during neurogenesis.
#TFfootprints #TranscriptionFactors #scATACseq
(5/n)
Multiomic Atlas of Human Tonsil
scRNAseq
scATACseq
CITEseq
#SpatialTranscriptomics #Visium
Marginal Reticular Cells, not fibroblastic reticular cells, are high in PDGFRβ, #FibrillarCollagen, Proteoglycan core proteins & DIO2
#Immunity 2024
www.cell.com/immunity/ful...
scRNAseq
scATACseq
CITEseq
#SpatialTranscriptomics #Visium
Marginal Reticular Cells, not fibroblastic reticular cells, are high in PDGFRβ, #FibrillarCollagen, Proteoglycan core proteins & DIO2
#Immunity 2024
www.cell.com/immunity/ful...
February 1, 2024 at 12:53 PM
Multiomic Atlas of Human Tonsil
scRNAseq
scATACseq
CITEseq
#SpatialTranscriptomics #Visium
Marginal Reticular Cells, not fibroblastic reticular cells, are high in PDGFRβ, #FibrillarCollagen, Proteoglycan core proteins & DIO2
#Immunity 2024
www.cell.com/immunity/ful...
scRNAseq
scATACseq
CITEseq
#SpatialTranscriptomics #Visium
Marginal Reticular Cells, not fibroblastic reticular cells, are high in PDGFRβ, #FibrillarCollagen, Proteoglycan core proteins & DIO2
#Immunity 2024
www.cell.com/immunity/ful...
chatomics! PCA analysis on scATACseq data. In this blog post, I will show you how the first PC is correlated with sequencing depth divingintogeneticsandgenomics.com/post/pca-sc...
February 9, 2025 at 3:15 PM
chatomics! PCA analysis on scATACseq data. In this blog post, I will show you how the first PC is correlated with sequencing depth divingintogeneticsandgenomics.com/post/pca-sc...
MAGICAL Multiome Accessibility Gene Integration Calling & Looping
Work for true or sample-paired scRNAseq + scATACseq
Bayesian framework to learn hidden TF activity & generate high-confidence TF-peak-gene circuits
vs TRIPOD FigR
#NatComputSci 2023
www.nature.com/articles/s43...
Work for true or sample-paired scRNAseq + scATACseq
Bayesian framework to learn hidden TF activity & generate high-confidence TF-peak-gene circuits
vs TRIPOD FigR
#NatComputSci 2023
www.nature.com/articles/s43...
May 29, 2024 at 11:49 AM
MAGICAL Multiome Accessibility Gene Integration Calling & Looping
Work for true or sample-paired scRNAseq + scATACseq
Bayesian framework to learn hidden TF activity & generate high-confidence TF-peak-gene circuits
vs TRIPOD FigR
#NatComputSci 2023
www.nature.com/articles/s43...
Work for true or sample-paired scRNAseq + scATACseq
Bayesian framework to learn hidden TF activity & generate high-confidence TF-peak-gene circuits
vs TRIPOD FigR
#NatComputSci 2023
www.nature.com/articles/s43...
Human brain #Organoid
scRNAseq + scATACseq + single-cell transcription factor perturbation (CROP-seq, lentiviral gRNA library for 20 TFs, 3 gRNAs/TF, 1 gRNA/cell in >22k cells) in
GLI3-HES1 antagonism for dorsoventral patterning in human telencephalon
#Nature 2023
www.nature.com/articles/s41...
scRNAseq + scATACseq + single-cell transcription factor perturbation (CROP-seq, lentiviral gRNA library for 20 TFs, 3 gRNAs/TF, 1 gRNA/cell in >22k cells) in
GLI3-HES1 antagonism for dorsoventral patterning in human telencephalon
#Nature 2023
www.nature.com/articles/s41...
September 6, 2025 at 7:28 PM
Human brain #Organoid
scRNAseq + scATACseq + single-cell transcription factor perturbation (CROP-seq, lentiviral gRNA library for 20 TFs, 3 gRNAs/TF, 1 gRNA/cell in >22k cells) in
GLI3-HES1 antagonism for dorsoventral patterning in human telencephalon
#Nature 2023
www.nature.com/articles/s41...
scRNAseq + scATACseq + single-cell transcription factor perturbation (CROP-seq, lentiviral gRNA library for 20 TFs, 3 gRNAs/TF, 1 gRNA/cell in >22k cells) in
GLI3-HES1 antagonism for dorsoventral patterning in human telencephalon
#Nature 2023
www.nature.com/articles/s41...
Want to visualize & create a website for your omics data (incld CITEseq, scATACseq, #SpatialTranscriptomics)?
Try ShinyCell2!😆
Compatible with data formats Seurat Signac ArchR Scanpy
vs cellxgene WebAtlas Vitessce
github.com/the-ouyang-l...
bioRxiv 2024
www.biorxiv.org/content/10.1...
Try ShinyCell2!😆
Compatible with data formats Seurat Signac ArchR Scanpy
vs cellxgene WebAtlas Vitessce
github.com/the-ouyang-l...
bioRxiv 2024
www.biorxiv.org/content/10.1...
May 5, 2025 at 6:50 PM
Want to visualize & create a website for your omics data (incld CITEseq, scATACseq, #SpatialTranscriptomics)?
Try ShinyCell2!😆
Compatible with data formats Seurat Signac ArchR Scanpy
vs cellxgene WebAtlas Vitessce
github.com/the-ouyang-l...
bioRxiv 2024
www.biorxiv.org/content/10.1...
Try ShinyCell2!😆
Compatible with data formats Seurat Signac ArchR Scanpy
vs cellxgene WebAtlas Vitessce
github.com/the-ouyang-l...
bioRxiv 2024
www.biorxiv.org/content/10.1...
Single-cell omics🐭#OvarianAging
scRNAseq scATACseq
12- vs 3-mo
#Aging
1⃣Mesenchymal Phox2B/ESRRγ/HoxB7-TGFβ2➡️ #Fibrosis (steroidogenic stroma, fibroblast, theca, but NOT pericyte)
2⃣Granulosa cell HSPA5 #ATF3 ATF4➡️#ERStress
Any #VascularAging?
#GeroScience 2025
link.springer.com/article/10.1...
scRNAseq scATACseq
12- vs 3-mo
#Aging
1⃣Mesenchymal Phox2B/ESRRγ/HoxB7-TGFβ2➡️ #Fibrosis (steroidogenic stroma, fibroblast, theca, but NOT pericyte)
2⃣Granulosa cell HSPA5 #ATF3 ATF4➡️#ERStress
Any #VascularAging?
#GeroScience 2025
link.springer.com/article/10.1...
March 11, 2025 at 1:09 AM
Single-cell omics🐭#OvarianAging
scRNAseq scATACseq
12- vs 3-mo
#Aging
1⃣Mesenchymal Phox2B/ESRRγ/HoxB7-TGFβ2➡️ #Fibrosis (steroidogenic stroma, fibroblast, theca, but NOT pericyte)
2⃣Granulosa cell HSPA5 #ATF3 ATF4➡️#ERStress
Any #VascularAging?
#GeroScience 2025
link.springer.com/article/10.1...
scRNAseq scATACseq
12- vs 3-mo
#Aging
1⃣Mesenchymal Phox2B/ESRRγ/HoxB7-TGFβ2➡️ #Fibrosis (steroidogenic stroma, fibroblast, theca, but NOT pericyte)
2⃣Granulosa cell HSPA5 #ATF3 ATF4➡️#ERStress
Any #VascularAging?
#GeroScience 2025
link.springer.com/article/10.1...
Great conversations and inspiring vibes at @events.embl.org — felt amazing to share my work and hear from incredible speakers!
#EESAgeing #SingleCell #Aging #ATACseq #RNAseq #Immunology #Multiomics #scRNAseq #scATACseq
#EESAgeing #SingleCell #Aging #ATACseq #RNAseq #Immunology #Multiomics #scRNAseq #scATACseq
June 11, 2025 at 3:45 PM
Great conversations and inspiring vibes at @events.embl.org — felt amazing to share my work and hear from incredible speakers!
#EESAgeing #SingleCell #Aging #ATACseq #RNAseq #Immunology #Multiomics #scRNAseq #scATACseq
#EESAgeing #SingleCell #Aging #ATACseq #RNAseq #Immunology #Multiomics #scRNAseq #scATACseq
How is the progression of maturation regulated in forebrain inhibitory neurons? Excited to share our new study from the Mayer lab — stable differentiation, dynamic maturation, and stage-specific chromatin changes in GABAergic neurons.
#GABA #Neuroscience #scATACseq #scRNAseq
#GABA #Neuroscience #scATACseq #scRNAseq
Now out in @natneuro.nature.com: Temporal control of progenitor competence shapes maturation in GABAergic neuron development in mice. Congrats to first authors @annrosebright.bsky.social, Yana Kotlyarenko, @flo-neuhaus.bsky.social, and thanks to all collaborators!
www.nature.com/articles/s41...
1/n
www.nature.com/articles/s41...
1/n
Temporal control of progenitor competence shapes maturation in GABAergic neuron development in mice - Nature Neuroscience
Unlike cortical progenitors, ventral telencephalic progenitors retain the ability to generate diverse neuron types during neurogenesis. Here, the authors show that ventral telencephalic progenitor mat...
www.nature.com
July 9, 2025 at 6:20 AM
How is the progression of maturation regulated in forebrain inhibitory neurons? Excited to share our new study from the Mayer lab — stable differentiation, dynamic maturation, and stage-specific chromatin changes in GABAergic neurons.
#GABA #Neuroscience #scATACseq #scRNAseq
#GABA #Neuroscience #scATACseq #scRNAseq
This shift was mirrored in chromatin accessibility.
scATAC-seq revealed stage-specific enhancer activation, with late-born cells opening distinct regulatory elements — especially in distal regions. A dynamic change in the regulatory landscape.
#Chromatin #Epigenetics #scATACseq
(4/n)
scATAC-seq revealed stage-specific enhancer activation, with late-born cells opening distinct regulatory elements — especially in distal regions. A dynamic change in the regulatory landscape.
#Chromatin #Epigenetics #scATACseq
(4/n)
July 8, 2025 at 12:04 PM
This shift was mirrored in chromatin accessibility.
scATAC-seq revealed stage-specific enhancer activation, with late-born cells opening distinct regulatory elements — especially in distal regions. A dynamic change in the regulatory landscape.
#Chromatin #Epigenetics #scATACseq
(4/n)
scATAC-seq revealed stage-specific enhancer activation, with late-born cells opening distinct regulatory elements — especially in distal regions. A dynamic change in the regulatory landscape.
#Chromatin #Epigenetics #scATACseq
(4/n)
🔬 Your immune system doesn’t just weaken with age—it evolves. We mapped how.
📊 We used single-cell multi-omics (RNA + ATAC) + bulk ATAC on PBMCs to build a cell-by-cell map of aging.
👉 Poster 83, EMBO | EMBL Symposium
#SingleCell #Aging #EMBL #Multiomics #scRNAseq #scATACseq
📊 We used single-cell multi-omics (RNA + ATAC) + bulk ATAC on PBMCs to build a cell-by-cell map of aging.
👉 Poster 83, EMBO | EMBL Symposium
#SingleCell #Aging #EMBL #Multiomics #scRNAseq #scATACseq
June 10, 2025 at 10:39 AM
🔬 Your immune system doesn’t just weaken with age—it evolves. We mapped how.
📊 We used single-cell multi-omics (RNA + ATAC) + bulk ATAC on PBMCs to build a cell-by-cell map of aging.
👉 Poster 83, EMBO | EMBL Symposium
#SingleCell #Aging #EMBL #Multiomics #scRNAseq #scATACseq
📊 We used single-cell multi-omics (RNA + ATAC) + bulk ATAC on PBMCs to build a cell-by-cell map of aging.
👉 Poster 83, EMBO | EMBL Symposium
#SingleCell #Aging #EMBL #Multiomics #scRNAseq #scATACseq
But how does this relate to human disease?? Through an awesome collaboration with the @anshulkundaje.bsky.social lab, we trained ChromBPNet models with scATACseq datasets for each cell type and vascular site, and predict human variant effect on a cell type/site basis @soumyakundu.bsky.social
September 10, 2025 at 3:54 PM
But how does this relate to human disease?? Through an awesome collaboration with the @anshulkundaje.bsky.social lab, we trained ChromBPNet models with scATACseq datasets for each cell type and vascular site, and predict human variant effect on a cell type/site basis @soumyakundu.bsky.social
Superb work by Wouter @Zouters & @OlgaPushkarev developing ChromatinHD, two scale-adaptive #machinelearning models & interpretation tools that use #scRNAseq + #scATACseq data to better understand how chromatin accessibility relates to gene expression doi.org/10.1038/s414...
Happy 2025 everyone 🎆 !
Happy 2025 everyone 🎆 !
ChromatinHD connects single-cell DNA accessibility and conformation to gene expression through scale-adaptive machine learning - Nature Communications
Functional chromatin changes occur at different scales. Here, the authors introduce ChromatinHD, a method that characterises differential and predictive chromatin accessibility changes in a scale-adap...
doi.org
January 6, 2025 at 2:05 PM
Superb work by Wouter @Zouters & @OlgaPushkarev developing ChromatinHD, two scale-adaptive #machinelearning models & interpretation tools that use #scRNAseq + #scATACseq data to better understand how chromatin accessibility relates to gene expression doi.org/10.1038/s414...
Happy 2025 everyone 🎆 !
Happy 2025 everyone 🎆 !
Hi ! I am new here and I like to present my interests with this video from our Journal Club! This is an overview of the multiome analysis for scATACseq and scRNAseq using several
#CellRanger pipelines. This is inspired by our work at #LIBD and resources from 10x Genomics. youtu.be/fHVLi9-sftM?...
#CellRanger pipelines. This is inspired by our work at #LIBD and resources from 10x Genomics. youtu.be/fHVLi9-sftM?...
[2024-10-11] An overview of the CellRanger-ARC Pipeline Analysis
YouTube video by Leonardo Collado Torres
youtu.be
November 8, 2024 at 8:29 PM
Hi ! I am new here and I like to present my interests with this video from our Journal Club! This is an overview of the multiome analysis for scATACseq and scRNAseq using several
#CellRanger pipelines. This is inspired by our work at #LIBD and resources from 10x Genomics. youtu.be/fHVLi9-sftM?...
#CellRanger pipelines. This is inspired by our work at #LIBD and resources from 10x Genomics. youtu.be/fHVLi9-sftM?...
Spatially-resolved MultiOmics of🐭fetal #Cardiomyocyte
snRNAseq scATACseq 10X Visium
13 CM subsets
NFYa marks CM4-like subsets
CM NFYa KO🐭->
Embryonic death
#CardiacNoncompaction/Hypertrabeculation
⏬Proliferation
⏬Mitochondrial respiration
#DevCell 2023
www.sciencedirect.com/science/arti...
snRNAseq scATACseq 10X Visium
13 CM subsets
NFYa marks CM4-like subsets
CM NFYa KO🐭->
Embryonic death
#CardiacNoncompaction/Hypertrabeculation
⏬Proliferation
⏬Mitochondrial respiration
#DevCell 2023
www.sciencedirect.com/science/arti...
December 2, 2023 at 8:08 PM
Spatially-resolved MultiOmics of🐭fetal #Cardiomyocyte
snRNAseq scATACseq 10X Visium
13 CM subsets
NFYa marks CM4-like subsets
CM NFYa KO🐭->
Embryonic death
#CardiacNoncompaction/Hypertrabeculation
⏬Proliferation
⏬Mitochondrial respiration
#DevCell 2023
www.sciencedirect.com/science/arti...
snRNAseq scATACseq 10X Visium
13 CM subsets
NFYa marks CM4-like subsets
CM NFYa KO🐭->
Embryonic death
#CardiacNoncompaction/Hypertrabeculation
⏬Proliferation
⏬Mitochondrial respiration
#DevCell 2023
www.sciencedirect.com/science/arti...