To supplement my students' learning, I made this brief explanation + demo on how to analyze #spatialtranscriptomics data to identify spatially variable genes using Moran's I #dataanalysis #Rstats

Code along: www.youtube.com/watch?v=aaAN...

#AcademicSky #codetutorials #Bioinformatics

We build on #ggplot2, enabling use of ggextensions for customization. Lots of new tutorials demonstrating customizations. Auto-scaling of stacked bars, improved scalability, and other features compared to scatterpies.

Try it out! jef.works/scatterbar/

#codetutorials #academicsky

In this blog post, I use our #Bioinformatics #Python tool STalign to align two 10X Visium #SpatialTranscriptomics datasets. I prefer working in #Rstats so I show how I use reticulate to interface with Python from within RStudio.

Code along: jef.works/blog/2023/11...

#AcademicChatter #codetutorials