Michael Zimmermann Lab
@zimmermannlab.bsky.social
We use high-throughput MS, bacterial genetics, gnotobiology & computational models to study metabolic interactions in microbial ecosystems
@EMBL
Homepage: https://www.embl.org/groups/zimmermann/
@EMBL
Homepage: https://www.embl.org/groups/zimmermann/
This semester, we also welcomed Luka, the newest PhD candidate of the Zimmermann group!
Luka is coming from Montenegro and will work on high-throughput exploration of the metagenomic sequence space.
Welcome🎉🎊
Luka is coming from Montenegro and will work on high-throughput exploration of the metagenomic sequence space.
Welcome🎉🎊
October 22, 2025 at 4:52 PM
This semester, we also welcomed Luka, the newest PhD candidate of the Zimmermann group!
Luka is coming from Montenegro and will work on high-throughput exploration of the metagenomic sequence space.
Welcome🎉🎊
Luka is coming from Montenegro and will work on high-throughput exploration of the metagenomic sequence space.
Welcome🎉🎊
We would like to introduce Daniel who has just started his PhD with us, in which he aims to accelerate high-throughput metabolomics method development to uncover bidirectional interactions between drugs and the human gut microbiome in the context of health and disease. 🦠
Welcome to the team! 🎉
Welcome to the team! 🎉
October 16, 2025 at 8:40 AM
We would like to introduce Daniel who has just started his PhD with us, in which he aims to accelerate high-throughput metabolomics method development to uncover bidirectional interactions between drugs and the human gut microbiome in the context of health and disease. 🦠
Welcome to the team! 🎉
Welcome to the team! 🎉
Sneak peek: 2 weeks ago, our team presented the GUT-BASE: our new atlas mapping how gut microbes transform drugs.
We profiled thousands of microbe–drug interactions across gut species as a first step toward understanding — and eventually predicting — how the microbiome shapes drug metabolism.
We profiled thousands of microbe–drug interactions across gut species as a first step toward understanding — and eventually predicting — how the microbiome shapes drug metabolism.
October 7, 2025 at 1:26 PM
Sneak peek: 2 weeks ago, our team presented the GUT-BASE: our new atlas mapping how gut microbes transform drugs.
We profiled thousands of microbe–drug interactions across gut species as a first step toward understanding — and eventually predicting — how the microbiome shapes drug metabolism.
We profiled thousands of microbe–drug interactions across gut species as a first step toward understanding — and eventually predicting — how the microbiome shapes drug metabolism.
Do you have experience in metabolomics/lipidomics/exposomics?
Check out the EMBL ARISE2 Fellowship Programme!
🔗 www.embl.org/training/ari...
📩 Contact: Juan Antonio Vizcaíno — Team Leader, EMBL-EBI
🔗 www.ebi.ac.uk/people/perso...
📌 Applications close soon!
📆 30/09/2025
More info below👇
Check out the EMBL ARISE2 Fellowship Programme!
🔗 www.embl.org/training/ari...
📩 Contact: Juan Antonio Vizcaíno — Team Leader, EMBL-EBI
🔗 www.ebi.ac.uk/people/perso...
📌 Applications close soon!
📆 30/09/2025
More info below👇
August 1, 2025 at 2:04 PM
Do you have experience in metabolomics/lipidomics/exposomics?
Check out the EMBL ARISE2 Fellowship Programme!
🔗 www.embl.org/training/ari...
📩 Contact: Juan Antonio Vizcaíno — Team Leader, EMBL-EBI
🔗 www.ebi.ac.uk/people/perso...
📌 Applications close soon!
📆 30/09/2025
More info below👇
Check out the EMBL ARISE2 Fellowship Programme!
🔗 www.embl.org/training/ari...
📩 Contact: Juan Antonio Vizcaíno — Team Leader, EMBL-EBI
🔗 www.ebi.ac.uk/people/perso...
📌 Applications close soon!
📆 30/09/2025
More info below👇
🎓 Congratulations to Dr. Amber Brauer on successfully defending her PhD thesis, “Metabolic Interactions in the Entero-Hepatic Cycle,” supervised by Dr. Michael Zimmermann and Prof. Dr. Anne-Claude Gavin. Thesis Committee: Prof. Pascale Vonaesch and Prof. Mirko Trajkovski.
#Metabolomics #Microbiome
#Metabolomics #Microbiome
May 22, 2025 at 8:38 AM
🎓 Congratulations to Dr. Amber Brauer on successfully defending her PhD thesis, “Metabolic Interactions in the Entero-Hepatic Cycle,” supervised by Dr. Michael Zimmermann and Prof. Dr. Anne-Claude Gavin. Thesis Committee: Prof. Pascale Vonaesch and Prof. Mirko Trajkovski.
#Metabolomics #Microbiome
#Metabolomics #Microbiome
Today, at the MSB unit seminar, our MSCA postdoc Anoop Singh spoke about quorum-sensing mediated bacterial interactions and biofilm formation in CRC-associated bacteria.
His findings aim to provide insights into CRC development and aid in developing therapeutics against pathogenic biofilms.
His findings aim to provide insights into CRC development and aid in developing therapeutics against pathogenic biofilms.
March 28, 2025 at 3:37 PM
Today, at the MSB unit seminar, our MSCA postdoc Anoop Singh spoke about quorum-sensing mediated bacterial interactions and biofilm formation in CRC-associated bacteria.
His findings aim to provide insights into CRC development and aid in developing therapeutics against pathogenic biofilms.
His findings aim to provide insights into CRC development and aid in developing therapeutics against pathogenic biofilms.
Welcome onboard Leyla!
Leyla is our new master's student and she will combine public untargeted metabolomics data & machine learning to predict potential drug biotransformation in gut microbes by highlighting key metabolic interactions.
Leyla is our new master's student and she will combine public untargeted metabolomics data & machine learning to predict potential drug biotransformation in gut microbes by highlighting key metabolic interactions.
February 6, 2025 at 10:33 AM
Welcome onboard Leyla!
Leyla is our new master's student and she will combine public untargeted metabolomics data & machine learning to predict potential drug biotransformation in gut microbes by highlighting key metabolic interactions.
Leyla is our new master's student and she will combine public untargeted metabolomics data & machine learning to predict potential drug biotransformation in gut microbes by highlighting key metabolic interactions.
Congratulations to Lenard, our first-year PhD student, for winning one of the poster prizes at the EMBL PhD Symposium! Lenard is off to a great start in his PhD journey! 🚀 @embojournal.org
January 27, 2025 at 1:26 PM
Congratulations to Lenard, our first-year PhD student, for winning one of the poster prizes at the EMBL PhD Symposium! Lenard is off to a great start in his PhD journey! 🚀 @embojournal.org