Marc Chevrette
@wildtypemc.bsky.social
Microbiome gen(om|et)ics, secondary metabolism, comp bio, antibiotic/drug disco, evolution, & hockey. he/him.
Bryan Cranston is Gordon Lightfoot
July 15, 2025 at 5:50 AM
Bryan Cranston is Gordon Lightfoot
July 13, 2025 at 2:34 PM
Reposted by Marc Chevrette
This is how we started implementing the similarity metric (GATOR Focal Scores) and how it actually turned out
July 8, 2025 at 12:04 PM
This is how we started implementing the similarity metric (GATOR Focal Scores) and how it actually turned out
Reposted by Marc Chevrette
GATOR-GC is out at @narjournal.bsky.social!! Check out our new targeted genome mining tool featuring a novel similarity metric to efficiently compare and deduplicate gene clusters.
We uncover biosynthetic diversity missed by other genome mining tools
academic.oup.com/nar/article/...
We uncover biosynthetic diversity missed by other genome mining tools
academic.oup.com/nar/article/...
Targeted genome mining with GATOR-GC maps the evolutionary landscape of biosynthetic diversity
Abstract. Gene clusters, groups of physically adjacent genes that work collectively, are pivotal to bacterial fitness and valuable in biotechnology and med
academic.oup.com
July 8, 2025 at 12:04 PM
GATOR-GC is out at @narjournal.bsky.social!! Check out our new targeted genome mining tool featuring a novel similarity metric to efficiently compare and deduplicate gene clusters.
We uncover biosynthetic diversity missed by other genome mining tools
academic.oup.com/nar/article/...
We uncover biosynthetic diversity missed by other genome mining tools
academic.oup.com/nar/article/...
Reposted by Marc Chevrette
#ISBA2025 will be my official introduction in the Actino community.
As we all look at understanding the diversity of these Microorganisms. I remain convinced that diversity drives discovery, from natural product discovery to human community.
#PrideMonth #QueerInScience
As we all look at understanding the diversity of these Microorganisms. I remain convinced that diversity drives discovery, from natural product discovery to human community.
#PrideMonth #QueerInScience
June 18, 2025 at 11:54 AM
#ISBA2025 will be my official introduction in the Actino community.
As we all look at understanding the diversity of these Microorganisms. I remain convinced that diversity drives discovery, from natural product discovery to human community.
#PrideMonth #QueerInScience
As we all look at understanding the diversity of these Microorganisms. I remain convinced that diversity drives discovery, from natural product discovery to human community.
#PrideMonth #QueerInScience
Reposted by Marc Chevrette
Nice lunch with Bea Camara, @lore-fermar.bsky.social, @wildtypemc.bsky.social, Jordi Weijers and @evodivmet.bsky.social (not on photo) discussing microbes and their interactions
#InternationalScience
#InternationalScience
June 20, 2025 at 3:58 PM
Nice lunch with Bea Camara, @lore-fermar.bsky.social, @wildtypemc.bsky.social, Jordi Weijers and @evodivmet.bsky.social (not on photo) discussing microbes and their interactions
#InternationalScience
#InternationalScience
Reposted by Marc Chevrette
Distinguishing among evolutionary and ecological processes shaping microbiome dynamics
#ISMEJournal review by Tiffany N Batarseh and @bkoskella.bsky.social
academic.oup.com/ismej/advanc...
#ISMEJournal review by Tiffany N Batarseh and @bkoskella.bsky.social
academic.oup.com/ismej/advanc...
Distinguishing among evolutionary and ecological processes shaping microbiome dynamics
Abstract. Evolution is defined as the change in allele frequency over time as a result of either neutral processes, such as genetic drift, or as an adaptiv
academic.oup.com
May 24, 2025 at 10:18 AM
Distinguishing among evolutionary and ecological processes shaping microbiome dynamics
#ISMEJournal review by Tiffany N Batarseh and @bkoskella.bsky.social
academic.oup.com/ismej/advanc...
#ISMEJournal review by Tiffany N Batarseh and @bkoskella.bsky.social
academic.oup.com/ismej/advanc...
If you are a PhD student in microbial interactions or natural products that is displaced by this political bullshit and looking for a new lab, I have room for one (or potentially two) PhD students in my group in the fall when I move to UW. Feel free to reach out via email.
May 24, 2025 at 3:11 AM
If you are a PhD student in microbial interactions or natural products that is displaced by this political bullshit and looking for a new lab, I have room for one (or potentially two) PhD students in my group in the fall when I move to UW. Feel free to reach out via email.
Reposted by Marc Chevrette
In other words, when you ask for example “do vaccines cause autism?” you are looking for information about whether a thing in the world (a vaccination) produces an outcome (autism). But the LLM can only answer “what words could sound right after this?”
April 27, 2025 at 2:16 AM
In other words, when you ask for example “do vaccines cause autism?” you are looking for information about whether a thing in the world (a vaccination) produces an outcome (autism). But the LLM can only answer “what words could sound right after this?”
Reposted by Marc Chevrette
CeMiSt affiliated Caja Dinesen defended her PhD "Microbial signaling and secondary metabolites" Congratulations!
With examiners Thomas Tørring @thomastorring.bsky.social, Lone Gram @lonegram.bsky.social, co-supervisor Thomas Ostenfeld Larsen, and supervisor Ákos T. Ková[email protected].
With examiners Thomas Tørring @thomastorring.bsky.social, Lone Gram @lonegram.bsky.social, co-supervisor Thomas Ostenfeld Larsen, and supervisor Ákos T. Ková[email protected].
April 14, 2025 at 11:27 AM
CeMiSt affiliated Caja Dinesen defended her PhD "Microbial signaling and secondary metabolites" Congratulations!
With examiners Thomas Tørring @thomastorring.bsky.social, Lone Gram @lonegram.bsky.social, co-supervisor Thomas Ostenfeld Larsen, and supervisor Ákos T. Ková[email protected].
With examiners Thomas Tørring @thomastorring.bsky.social, Lone Gram @lonegram.bsky.social, co-supervisor Thomas Ostenfeld Larsen, and supervisor Ákos T. Ková[email protected].
Reposted by Marc Chevrette
Come join us at Penn State for the our Plant Biology Symposium this June 24-26th. The theme is #Plant Secondary Metabolism (from #genetics to #ethnobotany to medicine!)
Abstracts and registration are open now!
Travel awards available for students/PDs!
Click for more information! vqr.vc/oG1KKYNSh
Abstracts and registration are open now!
Travel awards available for students/PDs!
Click for more information! vqr.vc/oG1KKYNSh
April 14, 2025 at 7:24 PM
Reposted by Marc Chevrette
We put together this protocol in part to encourage broader adoption of Multiplexed Activity Metabolomics, an engine for functional metabolomics of all types including specialized metabolite discovery.
We enjoy knowing if metabolite is active before isolating it, and so should you! #natprod
We enjoy knowing if metabolite is active before isolating it, and so should you! #natprod
Multiplexed cytometry for single cell chemical biology
Flow cytometry has great potential for screening in translational research areas due to its deep quantification of cellular features, ability to colle…
www.sciencedirect.com
April 4, 2025 at 7:28 PM
We put together this protocol in part to encourage broader adoption of Multiplexed Activity Metabolomics, an engine for functional metabolomics of all types including specialized metabolite discovery.
We enjoy knowing if metabolite is active before isolating it, and so should you! #natprod
We enjoy knowing if metabolite is active before isolating it, and so should you! #natprod
The Chevrette Lab has some big news.
Beginning in August we'll be joining @uwmadscience.bsky.social in the Department of Plant Pathology and @widofficial.bsky.social
Beyond excited for this new chapter.
youtu.be/t-M09m-y1KU?...
Beginning in August we'll be joining @uwmadscience.bsky.social in the Department of Plant Pathology and @widofficial.bsky.social
Beyond excited for this new chapter.
youtu.be/t-M09m-y1KU?...
Kenny Chesney - Back Where I Come From (Live at Farm Aid 2005)
YouTube video by Farm Aid
youtu.be
March 30, 2025 at 7:53 PM
The Chevrette Lab has some big news.
Beginning in August we'll be joining @uwmadscience.bsky.social in the Department of Plant Pathology and @widofficial.bsky.social
Beyond excited for this new chapter.
youtu.be/t-M09m-y1KU?...
Beginning in August we'll be joining @uwmadscience.bsky.social in the Department of Plant Pathology and @widofficial.bsky.social
Beyond excited for this new chapter.
youtu.be/t-M09m-y1KU?...
Reposted by Marc Chevrette
A message sent to tonight to all UMass faculty reminding us that we sacrifice 1st and 4th amendment rights when we travel internationally, and warning that non-citizens put themselves at risk when traveling. I’m glad for the warning & but pissed that this is where we’re at.
March 21, 2025 at 11:08 PM
A message sent to tonight to all UMass faculty reminding us that we sacrifice 1st and 4th amendment rights when we travel internationally, and warning that non-citizens put themselves at risk when traveling. I’m glad for the warning & but pissed that this is where we’re at.
New preprint collab with the Zhou lab!
www.biorxiv.org/content/10.1...
Learning gene interactions and functional landscapes from entire bacterial proteomes
www.biorxiv.org/content/10.1...
Learning gene interactions and functional landscapes from entire bacterial proteomes
Learning gene interactions and functional landscapes from entire bacterial proteomes
Unraveling complex gene interactions and understanding their functions in the genomes of bacteria will provide critical advancements in fields including bacterial genome evolution, microbiome studies,...
www.biorxiv.org
March 21, 2025 at 12:21 AM
New preprint collab with the Zhou lab!
www.biorxiv.org/content/10.1...
Learning gene interactions and functional landscapes from entire bacterial proteomes
www.biorxiv.org/content/10.1...
Learning gene interactions and functional landscapes from entire bacterial proteomes
Reposted by Marc Chevrette
🎉We are delighted to welcome @tilmweber.bsky.social from the Technical University of Denmark to the @natprodreports.rsc.org Editorial Board!
Learn more about Tilmann here🔽
blogs.rsc.org/np/2025/03/1...
Learn more about Tilmann here🔽
blogs.rsc.org/np/2025/03/1...
March 17, 2025 at 12:00 PM
🎉We are delighted to welcome @tilmweber.bsky.social from the Technical University of Denmark to the @natprodreports.rsc.org Editorial Board!
Learn more about Tilmann here🔽
blogs.rsc.org/np/2025/03/1...
Learn more about Tilmann here🔽
blogs.rsc.org/np/2025/03/1...
Reposted by Marc Chevrette
I don't usually get much email about my #MattersMicrobial podcast, which is okay. But I had a PhD student in Brazil just write to me, thanking me for a prior podcast I did with @wildtypemc.bsky.social on genome mining, which she found useful. That made me happy.
a man with a mustache says how bout that in blue
ALT: a man with a mustache says how bout that in blue
media.tenor.com
March 15, 2025 at 10:51 PM
I don't usually get much email about my #MattersMicrobial podcast, which is okay. But I had a PhD student in Brazil just write to me, thanking me for a prior podcast I did with @wildtypemc.bsky.social on genome mining, which she found useful. That made me happy.
Anyone have a good way to bulk backup a full Outlook 365 email account (with attachments)?
March 12, 2025 at 3:05 PM
Anyone have a good way to bulk backup a full Outlook 365 email account (with attachments)?
Reposted by Marc Chevrette
Reposted by Marc Chevrette
Congratulations to Claudia Solís-Lemus! The Bassam Z. Shakhashiri Public Science Engagement Award recognizes one University of Wisconsin–Madison faculty member and one academic staff member for excellence in engaging the public with STEAM (Science, Technology, Engineering, Arts, and Math) research.
March 10, 2025 at 3:21 PM
Congratulations to Claudia Solís-Lemus! The Bassam Z. Shakhashiri Public Science Engagement Award recognizes one University of Wisconsin–Madison faculty member and one academic staff member for excellence in engaging the public with STEAM (Science, Technology, Engineering, Arts, and Math) research.
Nice little Friday
March 7, 2025 at 9:12 PM
Nice little Friday