Siva
@sivarajank.bsky.social
He/him, Bioinformatician @ imb.de
Opinions are my own
Opinions are my own
Reposted by Siva
Ah, here it is.
bsky.app/profile/sara...
bsky.app/profile/sara...
I was loving Claude Code... until I tried it with #rstats. Constant errors, wouldn't use the tidyverse even when asked, "optimized" functions were slower.
Frustrated, I started a session just to teach R to Claude and summarize what it learned into a CLAUDE.md file gist.github.com/sj-io/3828d6...
Frustrated, I started a session just to teach R to Claude and summarize what it learned into a CLAUDE.md file gist.github.com/sj-io/3828d6...
Claude R Tidyverse Expert
Claude R Tidyverse Expert. GitHub Gist: instantly share code, notes, and snippets.
gist.github.com
November 15, 2025 at 4:28 PM
Ah, here it is.
bsky.app/profile/sara...
bsky.app/profile/sara...
While it's a limiting step, you can simply add your collaborator in cc and you would get access.
I have never tried it on parse data, but Simpleaf could be an option combine-lab.github.io/alevin-fry-t...
I have never tried it on parse data, but Simpleaf could be an option combine-lab.github.io/alevin-fry-t...
Generating a scRNA-seq count matrix with simpleaf
Simpleaf is a command line toolkit written in rust that exposes a unified and simplified interface for processing scRNA-seq datasets using the alevin-fry pipeline. It encapsulates the whole alevin-fry...
combine-lab.github.io
November 22, 2024 at 9:32 PM
While it's a limiting step, you can simply add your collaborator in cc and you would get access.
I have never tried it on parse data, but Simpleaf could be an option combine-lab.github.io/alevin-fry-t...
I have never tried it on parse data, but Simpleaf could be an option combine-lab.github.io/alevin-fry-t...