Now published in Cell! We found that ~15% of SNPs from divergent refs did not liftover as SNPs in the gray fox ref—half mapped to monomorphic sites, half failed to map. Co-authored with Matthew Genchev, @elliecat.bsky.social, and @jazlynmooney.bsky.social

www.sciencedirect.com/science/arti...

I am thrilled to share this paper outlining some ideas I’ve been thinking about for a little while on a simple but powerful approach for predicting risk of inbreeding depression from long runs of homozygosity and non-ROH heterozygosity. 1/n @klohmueller.bsky.social doi.org/10.1016/j.tr...

In case someone wanted that link for detecting ghost introgression: github.com/Megmugure/gh...

Do you model by hand?
Do you like saving time?
Do you want better results without the grunt work?

Then come to my #Evol2025 talk! I’ll present CoalMiner, a tool I built to automate demographic model generation for tools like fastsimcoal.

Tuesday | Computational Biology II | 4:30–4:45pm