@markgerstein.bsky.social
Posting my talk at UW Madison (the DeMets lecture, hosted by
@daifengwang.bsky.social). Lots on bioinformatics methods for studying the brain: classic, present (DL) & future (quantum) lectures.gersteinlab.org/summary/Clas... New slides on AI agents & homomorphic encryption for privacy
@daifengwang.bsky.social). Lots on bioinformatics methods for studying the brain: classic, present (DL) & future (quantum) lectures.gersteinlab.org/summary/Clas... New slides on AI agents & homomorphic encryption for privacy
November 20, 2025 at 4:44 AM
Posting my talk at UW Madison (the DeMets lecture, hosted by
@daifengwang.bsky.social). Lots on bioinformatics methods for studying the brain: classic, present (DL) & future (quantum) lectures.gersteinlab.org/summary/Clas... New slides on AI agents & homomorphic encryption for privacy
@daifengwang.bsky.social). Lots on bioinformatics methods for studying the brain: classic, present (DL) & future (quantum) lectures.gersteinlab.org/summary/Clas... New slides on AI agents & homomorphic encryption for privacy
Posting my talk tomorrow at the Computational Molecular Sciences & Engineering (CMSE) Symposium @Yale lectures.gersteinlab.org/summary/Enha... Lots of new slides on the discard-and-restart approach for enhanced structural sampling
November 10, 2025 at 4:40 AM
Posting my talk tomorrow at the Computational Molecular Sciences & Engineering (CMSE) Symposium @Yale lectures.gersteinlab.org/summary/Enha... Lots of new slides on the discard-and-restart approach for enhanced structural sampling
Posting my talk today for the AI in Health Series lectures.gersteinlab.org/summary/AI-M... Goes over an evolution of computational methods for biomedicine: Classical, DL & Quantum.
November 5, 2025 at 6:20 PM
Posting my talk today for the AI in Health Series lectures.gersteinlab.org/summary/AI-M... Goes over an evolution of computational methods for biomedicine: Classical, DL & Quantum.
Posting my talk tomorrow on Biomed AI @mila-quebec.bsky.social lectures.gersteinlab.org/summary/Biom...
Some new slides from Yunzhe Jiang on ENTEx & variant impact prediction and W Lee on ensembling ML models for drug screening
Some new slides from Yunzhe Jiang on ENTEx & variant impact prediction and W Lee on ensembling ML models for drug screening
October 16, 2025 at 3:06 AM
Posting my talk tomorrow on Biomed AI @mila-quebec.bsky.social lectures.gersteinlab.org/summary/Biom...
Some new slides from Yunzhe Jiang on ENTEx & variant impact prediction and W Lee on ensembling ML models for drug screening
Some new slides from Yunzhe Jiang on ENTEx & variant impact prediction and W Lee on ensembling ML models for drug screening
Posting my talk tomorrow on AI in Biomedicine at
Einstein Med (hosted by @zhengdy.bsky.social)
lectures.gersteinlab.org/summary/AI-t... Using AI for brain genomics & thinking about how it can do this research autonomously. Lots of new slides on AI coding & risks
Einstein Med (hosted by @zhengdy.bsky.social)
lectures.gersteinlab.org/summary/AI-t... Using AI for brain genomics & thinking about how it can do this research autonomously. Lots of new slides on AI coding & risks
October 9, 2025 at 2:41 AM
Posting my talk tomorrow on AI in Biomedicine at
Einstein Med (hosted by @zhengdy.bsky.social)
lectures.gersteinlab.org/summary/AI-t... Using AI for brain genomics & thinking about how it can do this research autonomously. Lots of new slides on AI coding & risks
Einstein Med (hosted by @zhengdy.bsky.social)
lectures.gersteinlab.org/summary/AI-t... Using AI for brain genomics & thinking about how it can do this research autonomously. Lots of new slides on AI coding & risks
Did my annual triathlon today in Madison. Good swim. Steady bike. Walk-skip-walk to the finish line. Made it! And, unlike last year, did an extensive stretch afterwards & drove myself home. Before & after race pics. (More at flickr.com/photos/mbgmb...)
September 6, 2025 at 10:22 PM
Did my annual triathlon today in Madison. Good swim. Steady bike. Walk-skip-walk to the finish line. Made it! And, unlike last year, did an extensive stretch afterwards & drove myself home. Before & after race pics. (More at flickr.com/photos/mbgmb...)
Posting my talk on AI & Brain Disorders at Princeton CHDI on Tuesday lectures.gersteinlab.org/summary/Ext-... Lots of new slides on drug repurposing and predicting age from histology images
August 18, 2025 at 4:48 AM
Posting my talk on AI & Brain Disorders at Princeton CHDI on Tuesday lectures.gersteinlab.org/summary/Ext-... Lots of new slides on drug repurposing and predicting age from histology images
Thoughts on Pearl's Book of Why blog.gerstein.info/2025/08/thou... Lots of Good Intuition on Bayesian Networks, Sometimes with Strong Opinions
August 2, 2025 at 11:21 PM
Thoughts on Pearl's Book of Why blog.gerstein.info/2025/08/thou... Lots of Good Intuition on Bayesian Networks, Sometimes with Strong Opinions
Posting my talk tomorrow at @emblebi.bsky.social (for the @ensembl.bsky.social group) lectures.gersteinlab.org/summary/Expl... AI Approaches for Understanding Brain Disorders: Exploring Intermediate Endophenotypes connecting Genotype to Diseases
July 30, 2025 at 7:02 PM
Posting my talk tomorrow at @emblebi.bsky.social (for the @ensembl.bsky.social group) lectures.gersteinlab.org/summary/Expl... AI Approaches for Understanding Brain Disorders: Exploring Intermediate Endophenotypes connecting Genotype to Diseases
Posting my talk tomorrow at @geneticscam.bsky.social on AI for Brain Disorders lectures.gersteinlab.org/summary/Mode... Lots of new slides on characterizing brain developmental time series with sigmoids
July 28, 2025 at 10:17 PM
Posting my talk tomorrow at @geneticscam.bsky.social on AI for Brain Disorders lectures.gersteinlab.org/summary/Mode... Lots of new slides on characterizing brain developmental time series with sigmoids
Posting my talk on Mon. on Cancer Genomics at the Institut Curie lectures.gersteinlab.org/summary/Char... Lots of new slides on using LLMs for "tumor boards" & for generating genomics workflows
July 19, 2025 at 4:55 PM
Posting my talk on Mon. on Cancer Genomics at the Institut Curie lectures.gersteinlab.org/summary/Char... Lots of new slides on using LLMs for "tumor boards" & for generating genomics workflows
Posting my talk tomorrow at the AI4Chemistry Summit at NYU lectures.gersteinlab.org/summary/AI-f... Lots of new slides on computing small molecule Hamiltonians & predicting macromolecular misfolding
June 26, 2025 at 3:15 AM
Posting my talk tomorrow at the AI4Chemistry Summit at NYU lectures.gersteinlab.org/summary/AI-f... Lots of new slides on computing small molecule Hamiltonians & predicting macromolecular misfolding
Posting my talk tomorrow at the SCORCH consortium meeting lectures.gersteinlab.org/summary/Chro... Tools for brain single-cell analysis: ChronODE for series data and ASTRO for spatial data.
June 23, 2025 at 2:12 AM
Posting my talk tomorrow at the SCORCH consortium meeting lectures.gersteinlab.org/summary/Chro... Tools for brain single-cell analysis: ChronODE for series data and ASTRO for spatial data.
Posting my talk tomorrow for the IMPACT-MH Consortium lectures.gersteinlab.org/summary/Digi... Digital Phenotyping from Wearables Using AI. Some new slides on using wearables to predict exercise lapses
June 9, 2025 at 1:58 AM
Posting my talk tomorrow for the IMPACT-MH Consortium lectures.gersteinlab.org/summary/Digi... Digital Phenotyping from Wearables Using AI. Some new slides on using wearables to predict exercise lapses
Also, we've summarized our analysis of @carlzimmer.com's genome out to Chr22. And we have synced the lectures more closely with readings, now trying to reference the great ISL book as much as possible (statlearning.com)
June 7, 2025 at 2:06 AM
Also, we've summarized our analysis of @carlzimmer.com's genome out to Chr22. And we have synced the lectures more closely with readings, now trying to reference the great ISL book as much as possible (statlearning.com)
School's out for the summer, & I've finally got around to cleaning up the website for my class on biomedical data science (gersteinlab.org/courses/452)
I've been teaching this course for >25 years. This year, we've posted lots of new lecture videos.
I've been teaching this course for >25 years. This year, we've posted lots of new lecture videos.
June 7, 2025 at 2:05 AM
School's out for the summer, & I've finally got around to cleaning up the website for my class on biomedical data science (gersteinlab.org/courses/452)
I've been teaching this course for >25 years. This year, we've posted lots of new lecture videos.
I've been teaching this course for >25 years. This year, we've posted lots of new lecture videos.
Liked the visual effect of @newyorker.com's recent "Double Cover"
May 27, 2025 at 3:04 AM
Liked the visual effect of @newyorker.com's recent "Double Cover"
Posting my talk tomorrow at the @broadinstitute.org's Stanley Center lectures.gersteinlab.org/summary/Expl... Exploring Intermediate Endophenotypes connecting Genotype to Diseases
May 14, 2025 at 11:35 PM
Posting my talk tomorrow at the @broadinstitute.org's Stanley Center lectures.gersteinlab.org/summary/Expl... Exploring Intermediate Endophenotypes connecting Genotype to Diseases
Posting my talk today at
the @ucirvine.bsky.social center for Neural Circuit Mapping lectures.gersteinlab.org/summary/SCZ-... . Lots of slides on using AI approaches for Schizophrenia, Alzheimer's & ADHD, including some new ones on analyzing AD imaging.
the @ucirvine.bsky.social center for Neural Circuit Mapping lectures.gersteinlab.org/summary/SCZ-... . Lots of slides on using AI approaches for Schizophrenia, Alzheimer's & ADHD, including some new ones on analyzing AD imaging.
May 6, 2025 at 3:03 PM
Posting my talk today at
the @ucirvine.bsky.social center for Neural Circuit Mapping lectures.gersteinlab.org/summary/SCZ-... . Lots of slides on using AI approaches for Schizophrenia, Alzheimer's & ADHD, including some new ones on analyzing AD imaging.
the @ucirvine.bsky.social center for Neural Circuit Mapping lectures.gersteinlab.org/summary/SCZ-... . Lots of slides on using AI approaches for Schizophrenia, Alzheimer's & ADHD, including some new ones on analyzing AD imaging.
Posting my talk on Mon. for the Frontiers in Computational Biosciences series at @UCLA lectures.gersteinlab.org/summary/Bett... . Lots of new slides on creating digital phenotypes from wearable devices & relating them to genetics and on quantum computing
May 4, 2025 at 12:38 AM
Posting my talk on Mon. for the Frontiers in Computational Biosciences series at @UCLA lectures.gersteinlab.org/summary/Bett... . Lots of new slides on creating digital phenotypes from wearable devices & relating them to genetics and on quantum computing
Thoughts on @carlzimmer.com's Airborne blog.gerstein.info/2025/04/thou... Great book about an overlooked mode of disease transmission, now prominent because of the pandemic
April 21, 2025 at 12:57 AM
Thoughts on @carlzimmer.com's Airborne blog.gerstein.info/2025/04/thou... Great book about an overlooked mode of disease transmission, now prominent because of the pandemic
Thinking about Summer: Abstract screen patterns in the Sound (More: www.flickr.com/photos/mbgmb...)
April 14, 2025 at 2:25 AM
Thinking about Summer: Abstract screen patterns in the Sound (More: www.flickr.com/photos/mbgmb...)