Luzia Stalder
@luzia-stalder.bsky.social
Computational biologist and microbial ecologist at NIOO-KNAW, advancing ecosystem resilience through integrated research on plant-microbe interactions and the biodiversity of unique systems like the Galápagos. Committed to interdisciplinary collaboration.
Reposted by Luzia Stalder
@jhcepas.bsky.social on unveiling the rare microbial biosphere: Deep target capture sequencing for taxonomic and functional discovery in plant microbiomes and beyond
#PMS2025
#PMS2025
November 6, 2025 at 3:02 PM
@jhcepas.bsky.social on unveiling the rare microbial biosphere: Deep target capture sequencing for taxonomic and functional discovery in plant microbiomes and beyond
#PMS2025
#PMS2025
Reposted by Luzia Stalder
Power of prediction for nodules and nitrogen fixation from @finkel-lab.bsky.social #PMS2025
November 4, 2025 at 2:58 PM
Power of prediction for nodules and nitrogen fixation from @finkel-lab.bsky.social #PMS2025
Reposted by Luzia Stalder
Very proud to see part of @luzia-stalder.bsky.social inspiring PhD work now published in Microbiome!
We tackled the lack of resolution that affects many plant microbiome studies by designing new barcoding loci from scratch. Our multi-kb amplicons resolve Pseudomonas and fungal strain diversity.
We tackled the lack of resolution that affects many plant microbiome studies by designing new barcoding loci from scratch. Our multi-kb amplicons resolve Pseudomonas and fungal strain diversity.
Still using 16S/ITS profiling? You might want to reconsider👀
Our new paper presents pangenome-informed amplicons that provide up to 10× higher phylogenetic resolution than full-length ribosomal markers- while remaining cost effective and scalable!
microbiomejournal.biomedcentral.com/articles/10....
Our new paper presents pangenome-informed amplicons that provide up to 10× higher phylogenetic resolution than full-length ribosomal markers- while remaining cost effective and scalable!
microbiomejournal.biomedcentral.com/articles/10....
High-resolution profiling of bacterial and fungal communities using pangenome-informed taxon-specific long-read amplicons - Microbiome
Background High-throughput sequencing technologies have greatly advanced our understanding of microbiomes, but resolving microbial communities at species and strain levels remains challenging. Results...
microbiomejournal.biomedcentral.com
October 31, 2025 at 2:18 PM
Very proud to see part of @luzia-stalder.bsky.social inspiring PhD work now published in Microbiome!
We tackled the lack of resolution that affects many plant microbiome studies by designing new barcoding loci from scratch. Our multi-kb amplicons resolve Pseudomonas and fungal strain diversity.
We tackled the lack of resolution that affects many plant microbiome studies by designing new barcoding loci from scratch. Our multi-kb amplicons resolve Pseudomonas and fungal strain diversity.
Still using 16S/ITS profiling? You might want to reconsider👀
Our new paper presents pangenome-informed amplicons that provide up to 10× higher phylogenetic resolution than full-length ribosomal markers- while remaining cost effective and scalable!
microbiomejournal.biomedcentral.com/articles/10....
Our new paper presents pangenome-informed amplicons that provide up to 10× higher phylogenetic resolution than full-length ribosomal markers- while remaining cost effective and scalable!
microbiomejournal.biomedcentral.com/articles/10....
High-resolution profiling of bacterial and fungal communities using pangenome-informed taxon-specific long-read amplicons - Microbiome
Background High-throughput sequencing technologies have greatly advanced our understanding of microbiomes, but resolving microbial communities at species and strain levels remains challenging. Results...
microbiomejournal.biomedcentral.com
October 30, 2025 at 1:32 PM
Still using 16S/ITS profiling? You might want to reconsider👀
Our new paper presents pangenome-informed amplicons that provide up to 10× higher phylogenetic resolution than full-length ribosomal markers- while remaining cost effective and scalable!
microbiomejournal.biomedcentral.com/articles/10....
Our new paper presents pangenome-informed amplicons that provide up to 10× higher phylogenetic resolution than full-length ribosomal markers- while remaining cost effective and scalable!
microbiomejournal.biomedcentral.com/articles/10....