(A central database such as NCBI Pathogens certainly helps though!)

Reminding the world about Mashpit 🤘 joss.theoj.org/papers/10.21...

I strongly believe in PulseNet for genomic epidemiology, but if industry wants a semi anonymous genomic epidemiology platform (but less effective than PulseNet), we developed one at UGA. It fits on a raspberry pi and lets partners share encoded genomes without a central database.

What was the actual legal advice? I love that you thought ahead for that.

We are a two fed family, so no income for 40 days. I am incandescent with rage about the Dems caving.

This was the result of a discussion where someone asked if there was a tool out there that can show the first X bases of a fastq file. Seqkit was the first out the gate which you can see here: github.com/shenwei356/s...

I'm also producing some benchmarks shown here. Fasten isn't the fastest in every instance, but I am proud to show where it ranks among similar tools. These benchmarks are being produced with every `git push`. github.com/lskatz/faste...

The loss of an IRB at CDC would be catastrophic. CDC does quite a lot of research, and protecting people and their data is important.

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Parts two and three will be released in the weeks to come.

Oh damn I was just talking about doing this for bioinformatics in government on my podcast but I stopped because I don't think I have the pull. @carlzimmer.com 's is going to be incredible.