Heinrich Ferreira
@heinrichferreira.bsky.social
Sydney, Australia. Lover of non-fiction books on biology and curious about bioinformatics.
Created the Visual Genome Browser, which represents genomic data in 2D.
https://splicejunction.blogspot.com/2015/09/spliced-genes-natures-model-hobby-kit.html
Created the Visual Genome Browser, which represents genomic data in 2D.
https://splicejunction.blogspot.com/2015/09/spliced-genes-natures-model-hobby-kit.html
I know this is not Rust, but I have wrapped this C++ aligner in a DLL and I am calling it from C#. It is lightning fast. I am planning to re-code this C++ in Rust when I get more eperience. github.com/Martinsos/ed...
GitHub - Martinsos/edlib: Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.
Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance. - Martinsos/edlib
github.com
March 26, 2025 at 2:51 AM
I know this is not Rust, but I have wrapped this C++ aligner in a DLL and I am calling it from C#. It is lightning fast. I am planning to re-code this C++ in Rust when I get more eperience. github.com/Martinsos/ed...
We had the same in Sydney, Australia in January 2020. The sun was darkened to a small spot in the sky and it was difficult just to breathe.
January 8, 2025 at 8:58 PM
We had the same in Sydney, Australia in January 2020. The sun was darkened to a small spot in the sky and it was difficult just to breathe.
Just found this excellent animation by Drew Berry showing how ATP Synthase operates
#atp
youtu.be/OT5AXGS1aL8?...
#atp
youtu.be/OT5AXGS1aL8?...
Synthesis of ATP (2018) Drew Berry and Franc Tétaz
YouTube video by WEHImovies
youtu.be
January 4, 2025 at 8:59 PM
Just found this excellent animation by Drew Berry showing how ATP Synthase operates
#atp
youtu.be/OT5AXGS1aL8?...
#atp
youtu.be/OT5AXGS1aL8?...
I am experimenting writing my own based on samtools bsky.app/profile/hein...
Mapped reads from a CRAM file by using SAMTOOLS in the background to interactively decode the DNA reads overlapping with the telomeric region of Chromosome 1 from the HG38 human reference genome.
Coming functionality for Visual Genome Browser
#bioinformatics #genomics #telomeres #cram #genomebrowser
Coming functionality for Visual Genome Browser
#bioinformatics #genomics #telomeres #cram #genomebrowser
January 3, 2025 at 11:11 AM
I am experimenting writing my own based on samtools bsky.app/profile/hein...
Know exactly how you feel
January 3, 2025 at 10:40 AM
Know exactly how you feel