GenePattern
LightNews LightNews
banner
genepattern.org
GenePattern
@genepattern.org
45 followers 1 following 2 posts
GenePattern is an open source platform for reproducible bioinformatics providing access to 250+ tools for the analysis of genomic data
Posts Replies Media Videos
genepattern.org
The Genomics to Notebook (g2nb) environment is featured on the @galaxyproject.bsky.social blog. Read about how to use Galaxy, IGV, and other bioinformatics tools from within a @jupyter.org notebook interface!

galaxyproject.org/news/2025-04...

#nciitcr #bioinformatics
Genomics to Notebook (g2nb): extending the computational notebook
An environment that integrates Jupyter with Galaxy, allowing tools to be added as notebook cells, and providing access to thousands of bioinformatics tools from within a notebook interface.
galaxyproject.org
April 14, 2025 at 6:18 PM
genepattern.org
Tangram is now available on GenePattern! 🎉 Map sc-RNA-seq data onto spatial gene expression data. GPU & CPU compatible for flexible workflows.
📷 GitHub: t.ly/07w-M
👉 CPU: t.ly/9G2lJ
👉GPU: t.ly/XO8qA
#nciitcr
@broadinstitute.org
GitHub - broadinstitute/Tangram: Spatial alignment of single cell transcriptomic data.
Spatial alignment of single cell transcriptomic data. - GitHub - broadinstitute/Tangram: Spatial alignment of single cell transcriptomic data.
t.ly
December 12, 2024 at 8:39 PM