Finlay Maguire
finlaym.bsky.social
Finlay Maguire
@finlaym.bsky.social
Ast Prof CS+Epi at Dalhousie/Pathogenomics Bioinformatics Lead at Shared Hospital Lab (Sunnybrook): infectious disease genomic epidemiology (AMR/SC2/Zoonoses) & socially-focused collab data science (he/him)
Reposted by Finlay Maguire
The associated slogan of "where infinite ambition meets global impact" being mostly evocative of futility ("where an unstoppable force meets an immovable object") also contributes to this feeling.
September 14, 2025 at 2:05 PM
Reposted by Finlay Maguire
Probably should have seen this coming when they expensively redesigned the logo to detach the head from the rest of the body.
September 14, 2025 at 1:37 PM
The associated slogan of "where infinite ambition meets global impact" being mostly evocative of futility ("where an unstoppable force meets an immovable object") also contributes to this feeling.
September 14, 2025 at 2:05 PM
Probably should have seen this coming when they expensively redesigned the logo to detach the head from the rest of the body.
September 14, 2025 at 1:37 PM
"My mantra is transparency, fairness and equity" nothing more transparent, fair, and equitable than unilaterally locking out faculty and refusing to negotiate.
August 29, 2025 at 10:43 PM
"The lockout comes after 83 per cent of DFA members voted to reject the school’s latest contract offer." - I think you'll find it actually came before CTV...

Bit disappointed at the publicly non-partisan stance from the DSU president.
August 26, 2025 at 1:06 PM
It may not be worth much right now but this campaign still holds true.
April 1, 2025 at 5:47 PM
Francis Chikuse on Africa PGI mammoth priority pathogens prioritisation process. Process driven through 4 expert groups: Malaria, AMR (chaired by Iruka Okeke), foodborne diseases, vaccine preventable diseases. Priority AMR projects: Neonatal sepsis, invasive salmonella typhi, one health.
October 31, 2023 at 12:51 PM
Final talk in our harmonizing pathogen data collection from Zetty Jamaluddin (UKM) on hAMRonized (github.com/pha4ge/hAMRo...) AMRfinderplus analysis via Google Colab
zenodo.org/record/6438173 with recent extensions for batch and microreact Viz. Used in Malaysia with global workshop participants!
October 31, 2023 at 11:00 AM
Patiyan Anderson (MDU-PHL) on AusPathoGen umbrella with data management and Viz via AusTrakka (www.cdgn.org.au/austrakka). Need to optimise data collection to inform surveillance. Core+pathogen specific data driven by end-goal analyses (aiding buy-in and actually having actionable data).
AusTrakka — CDGN
The development of the AusTrakka platform was developed in response to key reports to the Office of Health Protection, Australian Government Department of Health, on public health genomics in Austra...
www.cdgn.org.au
October 31, 2023 at 10:37 AM
Jillian Paull (Broad) on PHA4GE's wastewater contextual data specification. Making sure investment in WW capacity is not wasted by bad data. Machine readability, interoperability to other specs, reuse of terms from pubmed.ncbi.nlm.nih.gov/35169842/, & input from HIC/LMIC folks across disciplines.
October 31, 2023 at 10:14 AM
Bryan Wee (Roslin) on contextual data for Uganda One Health AMR digital-one-health.github.io w/ red, yellow, green tags for sensitivity and harmonisation of data from ag, env, & clinic. Multidisciplinary data meeting to inform metadata specification (w/ PHA4GE recs) before pilot E. coli seq project.
DOH - Home
Digital One Health - University of Edinburgh.
digital-one-health.github.io
October 31, 2023 at 9:54 AM
Gerald Mboowa (AfricaCDC): 10 genomics centers for excellence coming w/ ACEGID/SANBI/KRISP bioinf support. 2019-2023: only 7 countries with WGS to only 7 without. ONT&Ill diversify the risk of reagent access issues. Federated African Pathogen Data Sharing & Archive to try and solve data challenges.
October 31, 2023 at 8:59 AM
Abebe Negeri (Ethiopian Public Health Institute) new Pathogen Genomics Core Facility est. 2021, largely SC2 so far but plans for HIV, TB, polio, AMR, IPAC etc. Integration of multiple programs key for sustainability and making most of a core. Need for full time staff and well-defined career paths!
October 31, 2023 at 8:43 AM
Kim Ng (SSI) on IT challenges scaling infrastructure and new MicrobeSeq initiative
microbeseqen.ssi.dk/about-microb... federating regional and SSI HPC based on IRIDA, microreact, galaxy, nextflow, ansible, git, and PHA4GE/elixir standards/recommendations. Key message: don't reinvent the wheel!
October 31, 2023 at 8:20 AM
Vincent Rennie and Annelies van Rie on MAGMA Automated mapping of transmission hotspots, treatment recommendations, and phylogenetic cluster selection: www.medrxiv.org/content/10.1..., @oschwengers.bsky.social on Bakta's recent updates and gene name harmonisation efforts (github.com/oschwengers/...)
GitHub - oschwengers/bakta: Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids - GitHub - oschwengers/bakta: Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
github.com
October 30, 2023 at 1:01 PM