Ferdinand Marlétaz
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ferdix.bsky.social
Ferdinand Marlétaz
@ferdix.bsky.social
Comparative and regulatory genomics. Animal phylogeny and evolution
Thé Mercury effect
November 26, 2025 at 11:46 AM
Cool!
November 18, 2025 at 10:54 PM
Reposted by Ferdinand Marlétaz
Gene annotations matter for downstream analyses: different structural gene-annotation pipelines yield markedly different orthology calls. We compare four strategies across species and argue for standards & QC before inference. Work led by @silviaprietob.bsky.social. Paper: doi.org/10.1093/bioi...
October 23, 2025 at 6:20 AM
Congrats, even ALGs in it 😝!
October 17, 2025 at 12:23 AM
bucolique!
October 2, 2025 at 4:42 PM
Congrats!
August 30, 2025 at 8:45 AM
Thanks to all those involved and particularly to Tachiro Goto who promoted this species as a chaetognath model! Please also check also the great News & Views by Lewin & Luo www.nature.com/articles/d41... /6
The perplexing body plan of arrow worms decoded
A genome sequence and single-cell atlas of a marine worm species point towards bursts of gene emergence, duplication and loss as the drivers of lineage-specific body traits.
www.nature.com
August 13, 2025 at 4:38 PM
Finally, the enigmatic MedPost gene finds its place right where it belongs (between Meds and Posts) in an extended Hox cluster of >15 genes /5
August 13, 2025 at 4:38 PM
We finally identified reversion to ancestral methylation patterns targeting mobile elements whose role in stabilising highly expressed genes was likely taken over by trans-splicing (hereby suggesting a possible role for this puzzling process) /4
August 13, 2025 at 4:38 PM
We also confirmed the presence of spiralian ALG-fusions in chaetognaths despite fairly rearranged chromosomal architecture, as well as centromeres functioning without the classical CenH3 gene /3
August 13, 2025 at 4:38 PM
We found that chaetognath genome is as puzzling as their body plan with extensive shuffling of gene repertoire, lots of gene novelty and loss, without evidence of WGD, which appear to be involved in the making of lineage-specific cell types /2
August 13, 2025 at 4:38 PM
Congrats!
July 24, 2025 at 7:01 PM