No worries and valid point. I probably won’t be involved in future efforts but I know that Johannes is definitely looking to expand efforts. Happy to put you two in touch via email if you’d like.

Thanks! Through the NSF NAIRR pilot program we were paired with an industry partner to support our AI-related project. The program connected us with NVIDIA and they provided three months of access to a 256-GPU DGX cluster, which is where we ran all of the AlphaFold predictions.

Thanks Andrew!

Thanks Andreas!

Thanks Pedro! Our nomination procedure used evidence count from BioGRID as one of the features. We didn’t rely on it (or other dbs) exclusively because we wanted to preserve the ability to nominate interaction pairs that may have been missed by existing physical PPI databases.

Thanks to members of rhe @johanneswalter.bsky.social lab and our fantastic collaborators @alanbrownhms.bsky.social and Agata Smogorzewska, we experimentally verified several of these new PPIs. But don’t worry, there are plenty more to work on. Come explore the data and see what you find!

The difference feels like it will be much more informative than overall values.

Just wanted to say that you making this MSA server available to the community is a true service to humanity. Thank you! Have you considered setting up a donation system? I expect many people would contribute!