Eirik Lågeide
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eiriklag.bsky.social
Eirik Lågeide
@eiriklag.bsky.social
Doctoral researcher at MPI Tübingen 🇩🇪🇳🇴 - Plant biology, immunity, virology, evolution 🌱🧬 Plant immunogenomics group
Could be that it is misannotation so you could blast it, try to reannotate or try to predict terminator activity without the leftover sequence. Though sometimes the RNA structure is needed for proper termination too.
December 19, 2025 at 11:24 PM
Seconding this, works great :)
December 8, 2025 at 4:41 PM
Thanks!!
December 5, 2025 at 7:21 PM
Clearly shows how irrelevant this journal is lmao
November 27, 2025 at 1:40 PM
RSVP button isn't working, can't input home region and career stage on my phone 😅
November 25, 2025 at 8:06 AM
I'm not aware of software to do exactly that, but if you use barcodes for the plants I'm sure there are python tools to read and append metadata, asking an LLM for help works. For analysis I recommend Aradeepopsis, it is pretty good at segmentation and size estimation, and it can also do timeseries.
November 24, 2025 at 11:52 AM
Lotta words and math to say that a space explosion looks like a typical space explosion. Still cool though
November 13, 2025 at 2:46 PM
Reposted by Eirik Lågeide
Asaf finishes on plasmids, prophages, and defense system being depleted in plant microbiota genomes

‼️ not only in genomes, but also in metagenome datasets similar trend observed

See their Genome Biology paper
genomebiology.biomedcentral.com/articles/10....

#PMS2025
Plasmids, prophages, and defense systems are depleted from plant microbiota genomes - Genome Biology
Plant-associated bacteria significantly impact plant growth and health. Understanding how bacterial genomes adapt to plants can provide insights into their growth promotion and virulence functions. He...
genomebiology.biomedcentral.com
November 6, 2025 at 8:48 AM
Omg wtf
November 1, 2025 at 4:43 PM
Car go boom
October 27, 2025 at 5:14 PM