Endika Haro
@eharo84.bsky.social
Enhancer biology at Rada-Iglesias lab
Reposted by Endika Haro
We are excited to participate this year again in the VBC summer school! If you want to work with me and my amazing student Maria, apply!
The Vienna BioCenter Summer School 2026 call is now open for talented undergrads, it's a great opportunity for students who are interested in graduate study in the life sciences. Christa Buecker from Max Perutz Labs Vienna is recruiting! Please share
https://training.vbc.ac.at/summer-school/
https://training.vbc.ac.at/summer-school/
November 21, 2025 at 3:36 PM
We are excited to participate this year again in the VBC summer school! If you want to work with me and my amazing student Maria, apply!
Reposted by Endika Haro
It's always special when you find your own paper in the table of contents of the journal 😍
"The cis-regulatory logic integrating spatial and temporal patterning in the vertebrate neural tube" -> Now out in its final form
www.cell.com/developmenta...
"The cis-regulatory logic integrating spatial and temporal patterning in the vertebrate neural tube" -> Now out in its final form
www.cell.com/developmenta...
November 18, 2025 at 4:11 PM
It's always special when you find your own paper in the table of contents of the journal 😍
"The cis-regulatory logic integrating spatial and temporal patterning in the vertebrate neural tube" -> Now out in its final form
www.cell.com/developmenta...
"The cis-regulatory logic integrating spatial and temporal patterning in the vertebrate neural tube" -> Now out in its final form
www.cell.com/developmenta...
Reposted by Endika Haro
Good to see the peer reviewed version of this in print
The cis-regulatory logic integrating spatial and temporal patterning in the vertebrate neural tube
A global temporal chromatin program operates across the vertebrate nervous system to control neural cell diversity
www.cell.com/developmenta...
The cis-regulatory logic integrating spatial and temporal patterning in the vertebrate neural tube
A global temporal chromatin program operates across the vertebrate nervous system to control neural cell diversity
www.cell.com/developmenta...
The cis-regulatory logic integrating spatial and temporal patterning in the vertebrate neural tube
Zhang et al. identify a global temporal chromatin program that operates across the
developing vertebrate nervous system to control neural cell diversity. This mechanism,
which involves Nr6a1 and NFIA/...
www.cell.com
November 18, 2025 at 8:59 AM
Good to see the peer reviewed version of this in print
The cis-regulatory logic integrating spatial and temporal patterning in the vertebrate neural tube
A global temporal chromatin program operates across the vertebrate nervous system to control neural cell diversity
www.cell.com/developmenta...
The cis-regulatory logic integrating spatial and temporal patterning in the vertebrate neural tube
A global temporal chromatin program operates across the vertebrate nervous system to control neural cell diversity
www.cell.com/developmenta...
Reposted by Endika Haro
🚨Reposts appreciated‼️If I had read this PhD offer five years ago, I wouldn’t have hesitated for a second to apply 😉
Passionate about gene regulation, chromatin, and developmental biology? Just contact @radaiglesiaslab.bsky.social at @ibbtec.bsky.social 🧬✨
#PhD #3DGenome
Passionate about gene regulation, chromatin, and developmental biology? Just contact @radaiglesiaslab.bsky.social at @ibbtec.bsky.social 🧬✨
#PhD #3DGenome
November 15, 2025 at 9:53 AM
🚨Reposts appreciated‼️If I had read this PhD offer five years ago, I wouldn’t have hesitated for a second to apply 😉
Passionate about gene regulation, chromatin, and developmental biology? Just contact @radaiglesiaslab.bsky.social at @ibbtec.bsky.social 🧬✨
#PhD #3DGenome
Passionate about gene regulation, chromatin, and developmental biology? Just contact @radaiglesiaslab.bsky.social at @ibbtec.bsky.social 🧬✨
#PhD #3DGenome
Interested in gene regulation during development? Don’t miss the opportunity!
🚨Reposts appreciated‼️If I had read this PhD offer five years ago, I wouldn’t have hesitated for a second to apply 😉
Passionate about gene regulation, chromatin, and developmental biology? Just contact @radaiglesiaslab.bsky.social at @ibbtec.bsky.social 🧬✨
#PhD #3DGenome
Passionate about gene regulation, chromatin, and developmental biology? Just contact @radaiglesiaslab.bsky.social at @ibbtec.bsky.social 🧬✨
#PhD #3DGenome
November 17, 2025 at 5:00 PM
Interested in gene regulation during development? Don’t miss the opportunity!
Reposted by Endika Haro
We recently reported that promoter competition can contribute to the robust insulation of gene regulatory domains (www.nature.com/articles/s41...).
We now offer a 4-years PhD contract to investigate whether the dirsuption of this regulatory mechanism can lead to congenital defects. More details 👇
We now offer a 4-years PhD contract to investigate whether the dirsuption of this regulatory mechanism can lead to congenital defects. More details 👇
November 6, 2025 at 6:37 PM
We recently reported that promoter competition can contribute to the robust insulation of gene regulatory domains (www.nature.com/articles/s41...).
We now offer a 4-years PhD contract to investigate whether the dirsuption of this regulatory mechanism can lead to congenital defects. More details 👇
We now offer a 4-years PhD contract to investigate whether the dirsuption of this regulatory mechanism can lead to congenital defects. More details 👇
Reposted by Endika Haro
#Preprint alert! 📣
We are thrilled to share the work led by Lara Zorro-Shahidian and Lucio di Filippo, in which we show that #MLL2 controls gene expression in both #ESC and upon #differentiation by facilitating the #enhancer like activity of #LINE1 elements
www.biorxiv.org/cgi/content/...
We are thrilled to share the work led by Lara Zorro-Shahidian and Lucio di Filippo, in which we show that #MLL2 controls gene expression in both #ESC and upon #differentiation by facilitating the #enhancer like activity of #LINE1 elements
www.biorxiv.org/cgi/content/...
MLL2 facilitates long-range gene regulation through LINE1 elements
Transcriptional regulation is tightly linked to chromatin organization, with H3K4me3 commonly marking both active and bivalent promoters. In embryonic stem cells (ESC), MLL2 is essential for H3K4me3 d...
www.biorxiv.org
August 13, 2025 at 5:54 AM
#Preprint alert! 📣
We are thrilled to share the work led by Lara Zorro-Shahidian and Lucio di Filippo, in which we show that #MLL2 controls gene expression in both #ESC and upon #differentiation by facilitating the #enhancer like activity of #LINE1 elements
www.biorxiv.org/cgi/content/...
We are thrilled to share the work led by Lara Zorro-Shahidian and Lucio di Filippo, in which we show that #MLL2 controls gene expression in both #ESC and upon #differentiation by facilitating the #enhancer like activity of #LINE1 elements
www.biorxiv.org/cgi/content/...
Reposted by Endika Haro
This work would not have been possible without the support of @ibbtec.bsky.social @csic.es @erc.europa.eu @ageinves.bsky.social @ec.europa.eu
c.es
August 11, 2025 at 2:56 PM
This work would not have been possible without the support of @ibbtec.bsky.social @csic.es @erc.europa.eu @ageinves.bsky.social @ec.europa.eu
Reposted by Endika Haro
📕Read the full preprint here: www.biorxiv.org/content/10.1...
Special thanks to my great PI and to the @radaiglesiaslab.bsky.social members at IBBTEC, specially to @sanchezgaya.bsky.social, whose work on the bioinformatics part of the project has been truly instrumental 💻📊📉⚡
Special thanks to my great PI and to the @radaiglesiaslab.bsky.social members at IBBTEC, specially to @sanchezgaya.bsky.social, whose work on the bioinformatics part of the project has been truly instrumental 💻📊📉⚡
Dual role of ZIC2 during neural induction: from pioneer transcription factor to enhancer activator
ZIC2, a member of the Zinc Finger of the Cerebellum family of transcription factors (TFs), plays crucial roles during neural development. In humans, defects in ZIC2 cause holoprosencephaly, a congenit...
www.biorxiv.org
July 24, 2025 at 4:28 PM
📕Read the full preprint here: www.biorxiv.org/content/10.1...
Special thanks to my great PI and to the @radaiglesiaslab.bsky.social members at IBBTEC, specially to @sanchezgaya.bsky.social, whose work on the bioinformatics part of the project has been truly instrumental 💻📊📉⚡
Special thanks to my great PI and to the @radaiglesiaslab.bsky.social members at IBBTEC, specially to @sanchezgaya.bsky.social, whose work on the bioinformatics part of the project has been truly instrumental 💻📊📉⚡
Reposted by Endika Haro
How to find Evolutionary Conserved Enhancers in 2025? 🐣-🐭
Check out our paper - fresh off the press!!!
We find widespread functional conservation of enhancers in absence of sequence homology
Including: a bioinformatic tool to map sequence-diverged enhancers!
rdcu.be/enVDN
github.com/tobiaszehnde...
Check out our paper - fresh off the press!!!
We find widespread functional conservation of enhancers in absence of sequence homology
Including: a bioinformatic tool to map sequence-diverged enhancers!
rdcu.be/enVDN
github.com/tobiaszehnde...
Conservation of regulatory elements with highly diverged sequences across large evolutionary distances
Nature Genetics - Combining functional genomic data from mouse and chicken with a synteny-based strategy identifies positionally conserved cis-regulatory elements in the absence of direct sequence...
rdcu.be
May 27, 2025 at 12:19 PM
How to find Evolutionary Conserved Enhancers in 2025? 🐣-🐭
Check out our paper - fresh off the press!!!
We find widespread functional conservation of enhancers in absence of sequence homology
Including: a bioinformatic tool to map sequence-diverged enhancers!
rdcu.be/enVDN
github.com/tobiaszehnde...
Check out our paper - fresh off the press!!!
We find widespread functional conservation of enhancers in absence of sequence homology
Including: a bioinformatic tool to map sequence-diverged enhancers!
rdcu.be/enVDN
github.com/tobiaszehnde...
Reposted by Endika Haro
#EMBLChromatin keeps being awesome: fantastic talks, lots of networking and troubleshooting! But guess who is also multitasking? ZIC2! Particularly during neural induction! Come by this afternoon to check poster 158 and I’ll tell you all about it 😉 @radaiglesiaslab.bsky.social
May 15, 2025 at 8:08 AM
#EMBLChromatin keeps being awesome: fantastic talks, lots of networking and troubleshooting! But guess who is also multitasking? ZIC2! Particularly during neural induction! Come by this afternoon to check poster 158 and I’ll tell you all about it 😉 @radaiglesiaslab.bsky.social
Reposted by Endika Haro
🧵5 Top Free Alternatives to BioRender for Scientific Illustrations!
These five websites offer free scientific illustrations for biologists. Great for presentations, research papers and other research communication needs.
Save and share the post!
These five websites offer free scientific illustrations for biologists. Great for presentations, research papers and other research communication needs.
Save and share the post!
May 13, 2025 at 7:55 PM
🧵5 Top Free Alternatives to BioRender for Scientific Illustrations!
These five websites offer free scientific illustrations for biologists. Great for presentations, research papers and other research communication needs.
Save and share the post!
These five websites offer free scientific illustrations for biologists. Great for presentations, research papers and other research communication needs.
Save and share the post!
Reposted by Endika Haro
Very happy to share the peer-reviewed version of our paper in which we study the formation and function of pair-wise and multi-way enhancer-promoter interactions in gene regulation (see thread below): www.nature.com/articles/s41...
May 13, 2025 at 9:41 AM
Very happy to share the peer-reviewed version of our paper in which we study the formation and function of pair-wise and multi-way enhancer-promoter interactions in gene regulation (see thread below): www.nature.com/articles/s41...
Reposted by Endika Haro
Really proud of Michaela Bartusel, who initiated this work while being a PhD in our lab. Michaela never gave up and, together with the great guidance of my friend and former colleague Eliezer Calo, made some very interesting findings regarding the genetic basis of orofacial clefting.
Non-syndromic orofacial clefts (OFCs) are common birth defects with unclear molecular causes. @ajhgnews.bsky.social latest article studies an OFC-associated risk locus & implicates tRNA splicing defects that cause ribosome stalling & neural crest cell dysfunction: www.cell.com/ajhg/abstrac... #ASHG
May 3, 2025 at 4:36 PM
Really proud of Michaela Bartusel, who initiated this work while being a PhD in our lab. Michaela never gave up and, together with the great guidance of my friend and former colleague Eliezer Calo, made some very interesting findings regarding the genetic basis of orofacial clefting.
Reposted by Endika Haro
I am incredibly proud to share that my work has officially been published in Cell! @cp-cell.bsky.social
This work was a product of years of dedication and countless hours of research in the labs of Joanna Wysocka and Dan Jarosz labs @stanfordmedicine.bsky.social
www.cell.com/cell/fulltex...
This work was a product of years of dedication and countless hours of research in the labs of Joanna Wysocka and Dan Jarosz labs @stanfordmedicine.bsky.social
www.cell.com/cell/fulltex...
DNA binding and mitotic phosphorylation protect polyglutamine proteins from assembly formation
DNA binding and phosphorylation protect FOXP2, a transcription factor with the longest
polyQ track in the proteome, from aggregation during interphase and mitosis. Harnessing
these native solubility-p...
www.cell.com
April 21, 2025 at 12:01 PM
I am incredibly proud to share that my work has officially been published in Cell! @cp-cell.bsky.social
This work was a product of years of dedication and countless hours of research in the labs of Joanna Wysocka and Dan Jarosz labs @stanfordmedicine.bsky.social
www.cell.com/cell/fulltex...
This work was a product of years of dedication and countless hours of research in the labs of Joanna Wysocka and Dan Jarosz labs @stanfordmedicine.bsky.social
www.cell.com/cell/fulltex...
Reposted by Endika Haro
Part 1 and 2 of the Long-read sequencing Special Issues are now live! tinyurl.com/Genome-Res-LRS
April 14, 2025 at 8:12 PM
Part 1 and 2 of the Long-read sequencing Special Issues are now live! tinyurl.com/Genome-Res-LRS
Reposted by Endika Haro
Do et al., 2025. Binding domain mutations provide insight into CTCF’s relationship with chromatin and its contribution to gene regulation www.cell.com/cell-genomic...
March 23, 2025 at 7:55 AM
Do et al., 2025. Binding domain mutations provide insight into CTCF’s relationship with chromatin and its contribution to gene regulation www.cell.com/cell-genomic...
Reposted by Endika Haro
Excited to share my latest work with @joadelas.bsky.social and @jamesbriscoe.bsky.social
Predictable Engineering of Signal-Dependent Cis-Regulatory Elements
www.biorxiv.org/content/10.1...
1/11
Predictable Engineering of Signal-Dependent Cis-Regulatory Elements
www.biorxiv.org/content/10.1...
1/11
Predictable Engineering of Signal-Dependent Cis-Regulatory Elements
www.biorxiv.org
March 10, 2025 at 1:28 PM
Excited to share my latest work with @joadelas.bsky.social and @jamesbriscoe.bsky.social
Predictable Engineering of Signal-Dependent Cis-Regulatory Elements
www.biorxiv.org/content/10.1...
1/11
Predictable Engineering of Signal-Dependent Cis-Regulatory Elements
www.biorxiv.org/content/10.1...
1/11
Reposted by Endika Haro
Do you have an exciting story about #enhancers or #enhanceropathies?. Then submit your abstract to the @embo.org workshop on "Enhancer mechanics and Enhanceropathies" in Denmark before is too late: the deadline for abstract submissions is in two weeks (March 17th)!
meetings.embo.org/event/25-enh...
meetings.embo.org/event/25-enh...
March 3, 2025 at 10:02 AM
Do you have an exciting story about #enhancers or #enhanceropathies?. Then submit your abstract to the @embo.org workshop on "Enhancer mechanics and Enhanceropathies" in Denmark before is too late: the deadline for abstract submissions is in two weeks (March 17th)!
meetings.embo.org/event/25-enh...
meetings.embo.org/event/25-enh...
Reposted by Endika Haro
Together with @smandrup.bsky.social and Minna Kaikkonen we are happy to announce the 3rd Edition of the EMBO Workshop on #Enhancers and #Enhanceropathies. This time we will meet during the beautiful Danish summer (June 16-21).
Book the dates and register soon!!!
meetings.embo.org/event/25-enh...
Book the dates and register soon!!!
meetings.embo.org/event/25-enh...
Enhancer Mechanics and Enhanceropathies
Join us for the highly anticipated third EMBO workshop on Enhancer Mechanics and Enhanceropathies! Building on the success of our previous meetings in Santander (2021) and Marseilles (2023), this eve…
meetings.embo.org
January 31, 2025 at 2:35 PM
Together with @smandrup.bsky.social and Minna Kaikkonen we are happy to announce the 3rd Edition of the EMBO Workshop on #Enhancers and #Enhanceropathies. This time we will meet during the beautiful Danish summer (June 16-21).
Book the dates and register soon!!!
meetings.embo.org/event/25-enh...
Book the dates and register soon!!!
meetings.embo.org/event/25-enh...
Reposted by Endika Haro
The administration took down the reproductive rights website that women need access to. So The Skimm bought a url and brought the content back. Pass this on!
Go to reproductiverightsdotgov.com
Go to reproductiverightsdotgov.com
ReproductiveRights.Gov Vanished, So We Brought It Back
theSkimm makes it easier to live smarter. You're welcome. Get all the info you need from AM to PM, wherever you are.
reproductiverightsdotgov.com
January 24, 2025 at 3:59 AM
The administration took down the reproductive rights website that women need access to. So The Skimm bought a url and brought the content back. Pass this on!
Go to reproductiverightsdotgov.com
Go to reproductiverightsdotgov.com
Reposted by Endika Haro
At this END of YEAR please check out our new paper on GENE ENDS and a convenient marker of transcription termination: RNAPII CTD T4ph! We think it is relevant to anyone studying human/animal #genes and #genome so put a lot of effort to make it easy to read. #RNABiology and #Epigenetics meet:)
Do you know where transcription of a gene actually stops? Hint: it is not the annotated gene end.
In our new paper in Nucleic Acids Research we argue that phosphorylation on threonine 4 of RNA Pol II CTD is a marker of transcription termination in animals... 🧵
academic.oup.com/nar/advance-...
In our new paper in Nucleic Acids Research we argue that phosphorylation on threonine 4 of RNA Pol II CTD is a marker of transcription termination in animals... 🧵
academic.oup.com/nar/advance-...
December 27, 2024 at 4:55 PM
At this END of YEAR please check out our new paper on GENE ENDS and a convenient marker of transcription termination: RNAPII CTD T4ph! We think it is relevant to anyone studying human/animal #genes and #genome so put a lot of effort to make it easy to read. #RNABiology and #Epigenetics meet:)
Reposted by Endika Haro
Fulfilling a family tradition the day before Christmas. Hike to la Picota #Cantabria
December 24, 2024 at 12:03 PM
Fulfilling a family tradition the day before Christmas. Hike to la Picota #Cantabria
Reposted by Endika Haro
Finally! The Hydroxychloroquine study by Gautret et al. has been retracted. I wrote a critical post about it in March 2020, days after it came out.
scienceintegritydigest.com/2020/03/24/t...
scienceintegritydigest.com/2020/03/24/t...
December 17, 2024 at 8:09 PM
Finally! The Hydroxychloroquine study by Gautret et al. has been retracted. I wrote a critical post about it in March 2020, days after it came out.
scienceintegritydigest.com/2020/03/24/t...
scienceintegritydigest.com/2020/03/24/t...
Reposted by Endika Haro
It has taken more than 4 years but the methodologically poor (doi.org/10.1016/j.th...) and questionable paper (1-day peer review bmcmedresmethodol.bi...) that promoted HCQ for COVID-19 is finally retracted. We've been saying for years it had to be (doi.org/10.1016/j.th...).
December 17, 2024 at 10:06 AM
It has taken more than 4 years but the methodologically poor (doi.org/10.1016/j.th...) and questionable paper (1-day peer review bmcmedresmethodol.bi...) that promoted HCQ for COVID-19 is finally retracted. We've been saying for years it had to be (doi.org/10.1016/j.th...).