Geetha Saarunya
@drsaarunya.bsky.social
University of Minnesota Medical School, Twin Cities.#newPI
#ML #Genetics #Multiomics #GIS
For Trauma care, Chronic pain and rural health.
Mum to two Bebe!
#ML #Genetics #Multiomics #GIS
For Trauma care, Chronic pain and rural health.
Mum to two Bebe!
Reposted by Geetha Saarunya
I think most of it is inhabiting the data.. if you are really trying to get a full understanding of a mechanism, then every piece of data either fits or doesn't fit.. it's always trying to live inside the data and use it to test the structure. – Ellen Rothenberg
December 19, 2024 at 10:23 PM
I think most of it is inhabiting the data.. if you are really trying to get a full understanding of a mechanism, then every piece of data either fits or doesn't fit.. it's always trying to live inside the data and use it to test the structure. – Ellen Rothenberg
Reposted by Geetha Saarunya
Apparently UMass are encouraging all international students to return to the US before 20 January.
November 13, 2024 at 4:19 PM
Apparently UMass are encouraging all international students to return to the US before 20 January.
Reposted by Geetha Saarunya
#statistics thought of the day: Don't use the Wilcoxon signed-rank test; use Kornbrot's rank difference test, and use the proportional odds ordinal logistic model to do that. hbiostat.org/bbr/nonpar#s... #stats #rstats
Biostatistics for Biomedical Research - 7 Nonparametric Statistical Tests
hbiostat.org
November 13, 2024 at 4:15 PM
#statistics thought of the day: Don't use the Wilcoxon signed-rank test; use Kornbrot's rank difference test, and use the proportional odds ordinal logistic model to do that. hbiostat.org/bbr/nonpar#s... #stats #rstats
Reposted by Geetha Saarunya
Predicting biomarker for the acute pulmonary embolism by using gene ontology and machine learning https://www.biorxiv.org/content/10.1101/2023.12.18.572107v1
Predicting biomarker for the acute pulmonary embolism by using gene ontology and machine learning https://www.biorxiv.org/content/10.1101/2023.12.18.572107v1
Acute pulmonary embolism (PE) is a life-threatening condition requiring early and accurate diagnosis
www.biorxiv.org
December 19, 2023 at 7:39 PM
Predicting biomarker for the acute pulmonary embolism by using gene ontology and machine learning https://www.biorxiv.org/content/10.1101/2023.12.18.572107v1
Reposted by Geetha Saarunya
Our study of faculty-to-faculty mentorship experiences 🌎 is published @royalsociety 🎉 We found a need for proving training for mentors & strategies for mentors & institutions for design of supportive mentorship programmes for early- to mid-career faculty.
royalsocietypublishing.org/doi/10.1098/...
royalsocietypublishing.org/doi/10.1098/...
December 13, 2023 at 2:52 PM
Our study of faculty-to-faculty mentorship experiences 🌎 is published @royalsociety 🎉 We found a need for proving training for mentors & strategies for mentors & institutions for design of supportive mentorship programmes for early- to mid-career faculty.
royalsocietypublishing.org/doi/10.1098/...
royalsocietypublishing.org/doi/10.1098/...
Reposted by Geetha Saarunya
Happy to share our latest preprint -- we built an integrated compendium of all publicly available human gut microbiome 16S data (~168,000 samples) and used it to explore patterns of microbiome variation around the world
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
October 17, 2023 at 6:20 PM
Happy to share our latest preprint -- we built an integrated compendium of all publicly available human gut microbiome 16S data (~168,000 samples) and used it to explore patterns of microbiome variation around the world
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
Reposted by Geetha Saarunya
"How do you swim through that murky area of where is he lying? Where is he stretching the truth? What is he forgetting or misremembering? Because he does all three of those things very consistently"
www.newyorker.com/magazine/202...
www.newyorker.com/magazine/202...
They Studied Dishonesty. Was Their Work a Lie?
Dan Ariely and Francesca Gino became famous for their research into why we bend the truth. Now they’ve both been accused of fabricating data.
www.newyorker.com
September 30, 2023 at 3:47 PM
"How do you swim through that murky area of where is he lying? Where is he stretching the truth? What is he forgetting or misremembering? Because he does all three of those things very consistently"
www.newyorker.com/magazine/202...
www.newyorker.com/magazine/202...
Reposted by Geetha Saarunya
I'm delighted to release the first half of my new textbook in human genetics:
web.stanford.edu/group/pritch...
"An Owner's Guide to the Human Genome: an introduction to human population genetics, variation and disease"
web.stanford.edu/group/pritch...
"An Owner's Guide to the Human Genome: an introduction to human population genetics, variation and disease"
An Owner's Guide to the Human Genome
An Owner's Guide to the Human Genome
web.stanford.edu
October 1, 2023 at 10:53 PM
I'm delighted to release the first half of my new textbook in human genetics:
web.stanford.edu/group/pritch...
"An Owner's Guide to the Human Genome: an introduction to human population genetics, variation and disease"
web.stanford.edu/group/pritch...
"An Owner's Guide to the Human Genome: an introduction to human population genetics, variation and disease"
Reposted by Geetha Saarunya
>4500 codes distributed! Please spread the word amongst clinicians, scientists, researchers, technicians, academics, and other scholars who would like to join: forms.gle/f3k65vC1JwgY... 🩺 🧪
BlueSky Invites
Please fill out this form if (1) you’d like to donate invite codes to scientists, clinicians, academics, other researchers or scholars or (2) you’re a member of one of these communities and would ...
forms.gle
September 30, 2023 at 12:37 PM
>4500 codes distributed! Please spread the word amongst clinicians, scientists, researchers, technicians, academics, and other scholars who would like to join: forms.gle/f3k65vC1JwgY... 🩺 🧪
Reposted by Geetha Saarunya
I dunno if bluesky paper threads are gonna work (I don't really understand why threads here aren't visible publicly), but I'm gonna try one anyway.
Here's what I've been working on for the last year or two.
Here's what I've been working on for the last year or two.
Simultaneous estimation of gene regulatory network structure and RNA kinetics from single cell gene expression https://www.biorxiv.org/content/10.1101/2023.09.21.558277v1
Simultaneous estimation of gene regulatory network structure and RNA kinetics from single cell gene expression https://www.biorxiv.org/content/10.1101/2023.09.21.558277v1
Cells respond to environmental and developmental stimuli by changing their transcriptomes through re
www.biorxiv.org
September 26, 2023 at 7:48 PM
I dunno if bluesky paper threads are gonna work (I don't really understand why threads here aren't visible publicly), but I'm gonna try one anyway.
Here's what I've been working on for the last year or two.
Here's what I've been working on for the last year or two.
Reposted by Geetha Saarunya
Reposted by Geetha Saarunya
funding opportunity: NHGRI is seeking R01/R21 applications to develop novel theory and methods for understanding the genetic architecture of complex human traits grants.nih.gov/grants/guide...
September 26, 2023 at 4:05 PM
funding opportunity: NHGRI is seeking R01/R21 applications to develop novel theory and methods for understanding the genetic architecture of complex human traits grants.nih.gov/grants/guide...