Axel Visel
@axelvisel.bsky.social
Genome Scientist. Studies how DNA makes humans, mice, plants, microbes. At Lawrence Berkeley National Lab and Joint Genome Institute. Views are my own.
Soils contain an amazing diversity of functions encoded in plasmids.
The Global Soil Plasmidome Resource: 98,728 soil plasmids from 6,860 samples.
Led by @mattlabguy.bsky.social and @apcamargo.bsky.social at @jgi.doe.gov @biosci.lbl.gov @berkeleylab.lbl.gov
www.nature.com/articles/s41...
The Global Soil Plasmidome Resource: 98,728 soil plasmids from 6,860 samples.
Led by @mattlabguy.bsky.social and @apcamargo.bsky.social at @jgi.doe.gov @biosci.lbl.gov @berkeleylab.lbl.gov
www.nature.com/articles/s41...
November 18, 2025 at 7:18 PM
Soils contain an amazing diversity of functions encoded in plasmids.
The Global Soil Plasmidome Resource: 98,728 soil plasmids from 6,860 samples.
Led by @mattlabguy.bsky.social and @apcamargo.bsky.social at @jgi.doe.gov @biosci.lbl.gov @berkeleylab.lbl.gov
www.nature.com/articles/s41...
The Global Soil Plasmidome Resource: 98,728 soil plasmids from 6,860 samples.
Led by @mattlabguy.bsky.social and @apcamargo.bsky.social at @jgi.doe.gov @biosci.lbl.gov @berkeleylab.lbl.gov
www.nature.com/articles/s41...
Reposted by Axel Visel
🧬 AI is helping decode the genome's "switchboard." A Berkeley Lab and Stanford study in Nature shows how combining experiments with machine learning reveals where AI succeeds and falls short in predicting how DNA enhancers control gene activity.
Cracking the Genome’s Switchboard: How AI Helps Decode Gene Regulation
A single letter in the DNA code could change the course of human development
newscenter.lbl.gov
November 13, 2025 at 5:15 PM
🧬 AI is helping decode the genome's "switchboard." A Berkeley Lab and Stanford study in Nature shows how combining experiments with machine learning reveals where AI succeeds and falls short in predicting how DNA enhancers control gene activity.
Starting in 15 minutes!
Very much looking forward to @axelvisel.bsky.social's talk "From Nucleotide to Megabase Scale: Enhancer Function in Development and Disease" in our @enhancedgenomics.bsky.social seminar series "The 3D Regulatory Genome"
📅 02 October 2025 (today!)
⏰ 4 pm GMT
Join:
us02web.zoom.us/webinar/regi...
📅 02 October 2025 (today!)
⏰ 4 pm GMT
Join:
us02web.zoom.us/webinar/regi...
October 2, 2025 at 2:47 PM
Starting in 15 minutes!
Reposted by Axel Visel
TOMORROW!
Register👉https://us02web.zoom.us/webinar/register/WN_do2hl_GoS8-_PkyHgANPPA
Register👉https://us02web.zoom.us/webinar/register/WN_do2hl_GoS8-_PkyHgANPPA
🧬Next speaker: @axelvisel.bsky.social (@berkeleylab.lbl.gov/@jgi.doe.gov) presents 'From Nucleotide
to Megabase Scale: Enhancer Function in Development and Disease'
👨🔬Moderated by @stefanschoenfelder.bsky.social
📅 Thu Oct 2, 4pm UK time
👉Register: us02web.zoom.us/webinar/regi...
#VirtualSeminar
to Megabase Scale: Enhancer Function in Development and Disease'
👨🔬Moderated by @stefanschoenfelder.bsky.social
📅 Thu Oct 2, 4pm UK time
👉Register: us02web.zoom.us/webinar/regi...
#VirtualSeminar
October 1, 2025 at 10:41 AM
TOMORROW!
Register👉https://us02web.zoom.us/webinar/register/WN_do2hl_GoS8-_PkyHgANPPA
Register👉https://us02web.zoom.us/webinar/register/WN_do2hl_GoS8-_PkyHgANPPA
🧬Next speaker: @axelvisel.bsky.social (@berkeleylab.lbl.gov/@jgi.doe.gov) presents 'From Nucleotide
to Megabase Scale: Enhancer Function in Development and Disease'
👨🔬Moderated by @stefanschoenfelder.bsky.social
📅 Thu Oct 2, 4pm UK time
👉Register: us02web.zoom.us/webinar/regi...
#VirtualSeminar
to Megabase Scale: Enhancer Function in Development and Disease'
👨🔬Moderated by @stefanschoenfelder.bsky.social
📅 Thu Oct 2, 4pm UK time
👉Register: us02web.zoom.us/webinar/regi...
#VirtualSeminar
September 24, 2025 at 12:52 PM
I often share links to paywalled research articles.
Quick reminder: NEVER pay those outrageous journal access fees. If you don’t have access, just email the corresponding author. They’re usually glad to share a PDF for free, whether or not you’re a “professional scientist.”
Quick reminder: NEVER pay those outrageous journal access fees. If you don’t have access, just email the corresponding author. They’re usually glad to share a PDF for free, whether or not you’re a “professional scientist.”
September 23, 2025 at 1:18 PM
I often share links to paywalled research articles.
Quick reminder: NEVER pay those outrageous journal access fees. If you don’t have access, just email the corresponding author. They’re usually glad to share a PDF for free, whether or not you’re a “professional scientist.”
Quick reminder: NEVER pay those outrageous journal access fees. If you don’t have access, just email the corresponding author. They’re usually glad to share a PDF for free, whether or not you’re a “professional scientist.”
Sequencing methods 🧬 have come a long way from census counts 🔢 to assembling genomes and understanding the functions 🧪 of bacteria and viruses.
New review by @jgi.doe.gov's Gitta Szabó, @emileyeloe-fadrosh.bsky.social, Tanja Woyke with @jeffinerca.bsky.social
www.nature.com/articles/s41...
New review by @jgi.doe.gov's Gitta Szabó, @emileyeloe-fadrosh.bsky.social, Tanja Woyke with @jeffinerca.bsky.social
www.nature.com/articles/s41...
A genomic view of Earth’s biomes - Nature Reviews Genetics
Genome-wide approaches have uncovered the vast microbial and viral diversity across ecosystems. This Review explores advances in metagenomics, single-cell sequencing and functional profiling to elucid...
www.nature.com
September 22, 2025 at 1:31 PM
Sequencing methods 🧬 have come a long way from census counts 🔢 to assembling genomes and understanding the functions 🧪 of bacteria and viruses.
New review by @jgi.doe.gov's Gitta Szabó, @emileyeloe-fadrosh.bsky.social, Tanja Woyke with @jeffinerca.bsky.social
www.nature.com/articles/s41...
New review by @jgi.doe.gov's Gitta Szabó, @emileyeloe-fadrosh.bsky.social, Tanja Woyke with @jeffinerca.bsky.social
www.nature.com/articles/s41...
From AI agents for giant virus discovery to biosynthetic gene clusters - the 2025 cohort of @jgi.doe.gov - @ucmerced.bsky.social summer interns once again took on some amazing projects 🌱🧬🤖
Check out their stories here:
jgi.doe.gov/user-science...
@berkeleylab.lbl.gov @biosci.lbl.gov
Check out their stories here:
jgi.doe.gov/user-science...
@berkeleylab.lbl.gov @biosci.lbl.gov
Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort | Joint Genome Institute
Interns contributed to a number of projects, from refining lab protocols at the bench to applying artificial intelligence to aspects of research questions
jgi.doe.gov
September 17, 2025 at 12:13 AM
From AI agents for giant virus discovery to biosynthetic gene clusters - the 2025 cohort of @jgi.doe.gov - @ucmerced.bsky.social summer interns once again took on some amazing projects 🌱🧬🤖
Check out their stories here:
jgi.doe.gov/user-science...
@berkeleylab.lbl.gov @biosci.lbl.gov
Check out their stories here:
jgi.doe.gov/user-science...
@berkeleylab.lbl.gov @biosci.lbl.gov
Congratulations to Allegra Aron, Jana Pilatova, @ryanziels.bsky.social, Andrew Vander Yacht, Itamar Shabtai, and Victoria Orphan!
@jgi.doe.gov @biosci.lbl.gov @berkeleylab.lbl.gov
@jgi.doe.gov @biosci.lbl.gov @berkeleylab.lbl.gov
Welcome the six researchers accepted to the FICUS program for FY26! Focus areas for projects include biofuels, biomaterials & bioproducts; hydrobiogeochemistry; & novel applications of molecular techniques.
🖥️🧬 @axelvisel.bsky.social @danudwary.secondarymetabolism.com @simrouxvirus.bsky.social
🖥️🧬 @axelvisel.bsky.social @danudwary.secondarymetabolism.com @simrouxvirus.bsky.social
Six join FICUS program in 2026 | Joint Genome Institute
Pictured from left to right are: [above] Allegra Aron, Jana Pilatova and Ryan Ziels; [below] Andrew Vander Yacht, Itamar Shabtai and Victoria Orphan The JGI is excited to welcom
jgi.doe.gov
September 16, 2025 at 6:23 PM
Congratulations to Allegra Aron, Jana Pilatova, @ryanziels.bsky.social, Andrew Vander Yacht, Itamar Shabtai, and Victoria Orphan!
@jgi.doe.gov @biosci.lbl.gov @berkeleylab.lbl.gov
@jgi.doe.gov @biosci.lbl.gov @berkeleylab.lbl.gov
Reposted by Axel Visel
Don't miss the JGI's own Heejung Cho at this year's @berkeleylab.lbl.gov Research SLAM. The event will take place Sept. 18 at 3 p.m. PT. You can stream the event here: streaming.lbl.gov
Or attend in person at the Building 50 Auditorium!
@biosci.lbl.gov @axelvisel.bsky.social
Or attend in person at the Building 50 Auditorium!
@biosci.lbl.gov @axelvisel.bsky.social
September 10, 2025 at 7:01 PM
Don't miss the JGI's own Heejung Cho at this year's @berkeleylab.lbl.gov Research SLAM. The event will take place Sept. 18 at 3 p.m. PT. You can stream the event here: streaming.lbl.gov
Or attend in person at the Building 50 Auditorium!
@biosci.lbl.gov @axelvisel.bsky.social
Or attend in person at the Building 50 Auditorium!
@biosci.lbl.gov @axelvisel.bsky.social
Reposted by Axel Visel
🚨NOTICE TO OUR USERS🚨
The Genome Portal will be replaced with the Data Portal application sometime next month.
Portal users can book a session with our team for technical help, feedback or a guided walk-through of the new Data Portal. 🖥️🧬
More information: jgi.doe.gov/analyze-data...
The Genome Portal will be replaced with the Data Portal application sometime next month.
Portal users can book a session with our team for technical help, feedback or a guided walk-through of the new Data Portal. 🖥️🧬
More information: jgi.doe.gov/analyze-data...
JGI Portals | Joint Genome Institute
Our data platforms are a key resource for the broader scientific community and require constant developments to meet the ever-changing demands of our users.NOTICEThe JGI Genome Portal is reaching its ...
jgi.doe.gov
September 8, 2025 at 6:24 PM
🚨NOTICE TO OUR USERS🚨
The Genome Portal will be replaced with the Data Portal application sometime next month.
Portal users can book a session with our team for technical help, feedback or a guided walk-through of the new Data Portal. 🖥️🧬
More information: jgi.doe.gov/analyze-data...
The Genome Portal will be replaced with the Data Portal application sometime next month.
Portal users can book a session with our team for technical help, feedback or a guided walk-through of the new Data Portal. 🖥️🧬
More information: jgi.doe.gov/analyze-data...
Reposted by Axel Visel
Abstracts are due Oct. 19 for the 2025 New Lineages of Life Symposium — 80 slots available!
See speakers below.
More info: jgi.doe.gov/work-with-us...
Full Agenda: jgi.doe.gov/work-with-us...
@axelvisel.bsky.social 🖥️🧬
See speakers below.
More info: jgi.doe.gov/work-with-us...
Full Agenda: jgi.doe.gov/work-with-us...
@axelvisel.bsky.social 🖥️🧬
September 2, 2025 at 4:56 PM
Abstracts are due Oct. 19 for the 2025 New Lineages of Life Symposium — 80 slots available!
See speakers below.
More info: jgi.doe.gov/work-with-us...
Full Agenda: jgi.doe.gov/work-with-us...
@axelvisel.bsky.social 🖥️🧬
See speakers below.
More info: jgi.doe.gov/work-with-us...
Full Agenda: jgi.doe.gov/work-with-us...
@axelvisel.bsky.social 🖥️🧬
The JGI starter pack: Members, users, collaborators, and friends of the Joint Genome Institute @jgi.doe.gov
Still many open slots, if you are working with the JGI and want to be added, DM me.
go.bsky.app/7jENfK9
Still many open slots, if you are working with the JGI and want to be added, DM me.
go.bsky.app/7jENfK9
August 29, 2025 at 2:54 AM
The JGI starter pack: Members, users, collaborators, and friends of the Joint Genome Institute @jgi.doe.gov
Still many open slots, if you are working with the JGI and want to be added, DM me.
go.bsky.app/7jENfK9
Still many open slots, if you are working with the JGI and want to be added, DM me.
go.bsky.app/7jENfK9
Ready to explore New Lineages of Life with @jgi.doe.gov ? 🧬🦠
Registration for our 2025 NeLLi Symposium is now open. For the first time in collaboration with @unlv.edu
Mark the date: November 6-7 in Las Vegas, NV
Registration for our 2025 NeLLi Symposium is now open. For the first time in collaboration with @unlv.edu
Mark the date: November 6-7 in Las Vegas, NV
You can now register for the November NeLLi Symposium!
Join us in November for talks focused on the most recent expansions of the Tree of Life, and the latest discoveries toward the evolution of cellular complexity and microbial symbiosis.
Learn more: jointgeno.me/NeLLi
@nigelmouncey.bsky.social
Join us in November for talks focused on the most recent expansions of the Tree of Life, and the latest discoveries toward the evolution of cellular complexity and microbial symbiosis.
Learn more: jointgeno.me/NeLLi
@nigelmouncey.bsky.social
2025 NeLLi Symposium | Joint Genome Institute
Las Vegas, NV Immediately followed by 1.5-day jamboree on November 6-7
jointgeno.me
August 25, 2025 at 9:39 PM
Ready to explore New Lineages of Life with @jgi.doe.gov ? 🧬🦠
Registration for our 2025 NeLLi Symposium is now open. For the first time in collaboration with @unlv.edu
Mark the date: November 6-7 in Las Vegas, NV
Registration for our 2025 NeLLi Symposium is now open. For the first time in collaboration with @unlv.edu
Mark the date: November 6-7 in Las Vegas, NV
Postdoc opportunity with @tomasbruna.bsky.social here at @jgi.doe.gov @berkeleylab.lbl.gov:
Develop, benchmark, and apply Plant Genomic Language Models (gLMs) 🌿🧬💻
jobs.lbl.gov/jobs/computa...
#AI #PlantGenomics #gLMs #Postdoc
Develop, benchmark, and apply Plant Genomic Language Models (gLMs) 🌿🧬💻
jobs.lbl.gov/jobs/computa...
#AI #PlantGenomics #gLMs #Postdoc
August 21, 2025 at 12:05 AM
Postdoc opportunity with @tomasbruna.bsky.social here at @jgi.doe.gov @berkeleylab.lbl.gov:
Develop, benchmark, and apply Plant Genomic Language Models (gLMs) 🌿🧬💻
jobs.lbl.gov/jobs/computa...
#AI #PlantGenomics #gLMs #Postdoc
Develop, benchmark, and apply Plant Genomic Language Models (gLMs) 🌿🧬💻
jobs.lbl.gov/jobs/computa...
#AI #PlantGenomics #gLMs #Postdoc
On the cover of @natplants.nature.com this month:
@leobaumgart.bsky.social @greensi.bsky.social @abmora.bsky.social @omalley-regulome.bsky.social et al. map binding sites for 360 TFs across 10 🌿plant🌿 species using a new multiDAP approach
Here is Sharon's explainer 🧵:
bsky.app/profile/gree...
@leobaumgart.bsky.social @greensi.bsky.social @abmora.bsky.social @omalley-regulome.bsky.social et al. map binding sites for 360 TFs across 10 🌿plant🌿 species using a new multiDAP approach
Here is Sharon's explainer 🧵:
bsky.app/profile/gree...
August 20, 2025 at 12:45 AM
On the cover of @natplants.nature.com this month:
@leobaumgart.bsky.social @greensi.bsky.social @abmora.bsky.social @omalley-regulome.bsky.social et al. map binding sites for 360 TFs across 10 🌿plant🌿 species using a new multiDAP approach
Here is Sharon's explainer 🧵:
bsky.app/profile/gree...
@leobaumgart.bsky.social @greensi.bsky.social @abmora.bsky.social @omalley-regulome.bsky.social et al. map binding sites for 360 TFs across 10 🌿plant🌿 species using a new multiDAP approach
Here is Sharon's explainer 🧵:
bsky.app/profile/gree...
In 2026, @jgi.doe.gov and EMSL will (for the first time!) hold a joint user meeting in Seattle from March 3-5
Program details to be announced, but our registration site just launched - so you can already secure your spot:
jgi.doe.gov/work-with-us...
Program details to be announced, but our registration site just launched - so you can already secure your spot:
jgi.doe.gov/work-with-us...
August 19, 2025 at 5:30 PM
In 2026, @jgi.doe.gov and EMSL will (for the first time!) hold a joint user meeting in Seattle from March 3-5
Program details to be announced, but our registration site just launched - so you can already secure your spot:
jgi.doe.gov/work-with-us...
Program details to be announced, but our registration site just launched - so you can already secure your spot:
jgi.doe.gov/work-with-us...
Congratulations to @jgi.doe.gov's 2025 Functional Genomics awardees:
@ostratodd.bsky.social @philmuslab.bsky.social @aaronrashotte.bsky.social @taylorlabgroup.bsky.social Hao Chen, Matthew Cope-Arguello, Olufemi Isimikalu, Paul Scesa, K. Scott, S. Wakao, B. Woolston
jgi.doe.gov/user-science...
@ostratodd.bsky.social @philmuslab.bsky.social @aaronrashotte.bsky.social @taylorlabgroup.bsky.social Hao Chen, Matthew Cope-Arguello, Olufemi Isimikalu, Paul Scesa, K. Scott, S. Wakao, B. Woolston
jgi.doe.gov/user-science...
JGI announces 2025 Functional Genomics awardees | Joint Genome Institute
This year's project goals range from engineering drought-tolerant woody bioenergy crops through transcriptional network mapping, developing microbial systems to convert renewable feedstocks into advan...
jgi.doe.gov
August 19, 2025 at 5:08 PM
Congratulations to @jgi.doe.gov's 2025 Functional Genomics awardees:
@ostratodd.bsky.social @philmuslab.bsky.social @aaronrashotte.bsky.social @taylorlabgroup.bsky.social Hao Chen, Matthew Cope-Arguello, Olufemi Isimikalu, Paul Scesa, K. Scott, S. Wakao, B. Woolston
jgi.doe.gov/user-science...
@ostratodd.bsky.social @philmuslab.bsky.social @aaronrashotte.bsky.social @taylorlabgroup.bsky.social Hao Chen, Matthew Cope-Arguello, Olufemi Isimikalu, Paul Scesa, K. Scott, S. Wakao, B. Woolston
jgi.doe.gov/user-science...
🌿Plant pangenomes🌿 have a LOT of genomic presence-absence-variation.
Or do they???
A new @jgi.doe.gov preprint by @tomasbruna.bsky.social @jotlovell.bsky.social @avril-m-harder.bsky.social Avinash Sreedasyam takes a closer look
www.biorxiv.org/content/10.1...
Or do they???
A new @jgi.doe.gov preprint by @tomasbruna.bsky.social @jotlovell.bsky.social @avril-m-harder.bsky.social Avinash Sreedasyam takes a closer look
www.biorxiv.org/content/10.1...
August 18, 2025 at 6:28 PM
🌿Plant pangenomes🌿 have a LOT of genomic presence-absence-variation.
Or do they???
A new @jgi.doe.gov preprint by @tomasbruna.bsky.social @jotlovell.bsky.social @avril-m-harder.bsky.social Avinash Sreedasyam takes a closer look
www.biorxiv.org/content/10.1...
Or do they???
A new @jgi.doe.gov preprint by @tomasbruna.bsky.social @jotlovell.bsky.social @avril-m-harder.bsky.social Avinash Sreedasyam takes a closer look
www.biorxiv.org/content/10.1...
Reposted by Axel Visel
Improvements to DAP-seq technology enable it to handle larger genomes and could expand opportunities for bioenergy and bioengineering applications—via multiplexed assays and data integration with single-cell gene expression maps.
Full story: jgi.doe.gov/user-science...
@axelvisel.bsky.social 🖥️🧬 🌱
Full story: jgi.doe.gov/user-science...
@axelvisel.bsky.social 🖥️🧬 🌱
DAP-seq Drives Robust Mapping of Gene Regulation | Joint Genome Institute
Multi-species assays yield an unprecedented view of plant evolution and adaptation.
jgi.doe.gov
August 14, 2025 at 5:28 PM
Improvements to DAP-seq technology enable it to handle larger genomes and could expand opportunities for bioenergy and bioengineering applications—via multiplexed assays and data integration with single-cell gene expression maps.
Full story: jgi.doe.gov/user-science...
@axelvisel.bsky.social 🖥️🧬 🌱
Full story: jgi.doe.gov/user-science...
@axelvisel.bsky.social 🖥️🧬 🌱
Congratulations to Uma Grover on an outstanding poster presentation! 🎉
Uma joined @b-coli.bsky.social's and my group at @jgi.doe.gov @biosci.lbl.gov this summer as a @berkeleylab.lbl.gov SULI intern and carried out exciting work on single-cell profiling of plant-fungal interactions.
Uma joined @b-coli.bsky.social's and my group at @jgi.doe.gov @biosci.lbl.gov this summer as a @berkeleylab.lbl.gov SULI intern and carried out exciting work on single-cell profiling of plant-fungal interactions.
August 9, 2025 at 1:25 PM
Congratulations to Uma Grover on an outstanding poster presentation! 🎉
Uma joined @b-coli.bsky.social's and my group at @jgi.doe.gov @biosci.lbl.gov this summer as a @berkeleylab.lbl.gov SULI intern and carried out exciting work on single-cell profiling of plant-fungal interactions.
Uma joined @b-coli.bsky.social's and my group at @jgi.doe.gov @biosci.lbl.gov this summer as a @berkeleylab.lbl.gov SULI intern and carried out exciting work on single-cell profiling of plant-fungal interactions.
August 8, 2025 at 6:25 PM
Hiding in plain sight - how close are we to mapping ALL 🧬enhancers🧬 in the genome?
Our new paper by Mannion et al. takes a systematic look at "hidden enhancers" and why they remain so hard to find. With @mosterwalder.bsky.social, @jlopezrios.bsky.social & many more
www.nature.com/articles/s41...
Our new paper by Mannion et al. takes a systematic look at "hidden enhancers" and why they remain so hard to find. With @mosterwalder.bsky.social, @jlopezrios.bsky.social & many more
www.nature.com/articles/s41...
August 8, 2025 at 6:10 PM
Hiding in plain sight - how close are we to mapping ALL 🧬enhancers🧬 in the genome?
Our new paper by Mannion et al. takes a systematic look at "hidden enhancers" and why they remain so hard to find. With @mosterwalder.bsky.social, @jlopezrios.bsky.social & many more
www.nature.com/articles/s41...
Our new paper by Mannion et al. takes a systematic look at "hidden enhancers" and why they remain so hard to find. With @mosterwalder.bsky.social, @jlopezrios.bsky.social & many more
www.nature.com/articles/s41...
A new, MUCH improved #Eucalyptus genome:
- haplotype-resolved
- 99.4% complete
- 700x better contiguity
- 35k annotated genes
Kudos to Anneri Lötter, @tomasbruna.bsky.social and @jotlovell.bsky.social at @jgi.doe.gov, @jillwegrzyn.bsky.social, Alexander Myburg et al.
doi.org/10.1093/g3jo...
- haplotype-resolved
- 99.4% complete
- 700x better contiguity
- 35k annotated genes
Kudos to Anneri Lötter, @tomasbruna.bsky.social and @jotlovell.bsky.social at @jgi.doe.gov, @jillwegrzyn.bsky.social, Alexander Myburg et al.
doi.org/10.1093/g3jo...
Researchers report a new reference genome for eucalyptus. Haplotype-resolved, it has 700-fold greater contiguity—
meaning the genome is reconstructed in larger, more complete segments. 🖥️🧬 🌱
More on our Plant Program: jgi.doe.gov/science-prog...
@axelvisel.bsky.social @biosci.lbl.gov
meaning the genome is reconstructed in larger, more complete segments. 🖥️🧬 🌱
More on our Plant Program: jgi.doe.gov/science-prog...
@axelvisel.bsky.social @biosci.lbl.gov
New and Improved: Eucalyptus Reference is Now Accessible | Joint Genome Institute
An improved genome assembly to support targeted tree breeding for the bioeconomy.
jgi.doe.gov
July 30, 2025 at 5:22 PM
A new, MUCH improved #Eucalyptus genome:
- haplotype-resolved
- 99.4% complete
- 700x better contiguity
- 35k annotated genes
Kudos to Anneri Lötter, @tomasbruna.bsky.social and @jotlovell.bsky.social at @jgi.doe.gov, @jillwegrzyn.bsky.social, Alexander Myburg et al.
doi.org/10.1093/g3jo...
- haplotype-resolved
- 99.4% complete
- 700x better contiguity
- 35k annotated genes
Kudos to Anneri Lötter, @tomasbruna.bsky.social and @jotlovell.bsky.social at @jgi.doe.gov, @jillwegrzyn.bsky.social, Alexander Myburg et al.
doi.org/10.1093/g3jo...
🧬 @jgi.doe.gov is hiring! We're seeking an Advanced Analysis Manager to lead data infrastructure and software engineering supporting the generation, analysis, and dissemination of genomics data
Hybrid | SF Bay Area | Apply by Aug 7
jobs.lbl.gov/jobs/advance...
@biosci.lbl.gov @berkeleylab.lbl.gov
Hybrid | SF Bay Area | Apply by Aug 7
jobs.lbl.gov/jobs/advance...
@biosci.lbl.gov @berkeleylab.lbl.gov
July 29, 2025 at 11:49 PM
🧬 @jgi.doe.gov is hiring! We're seeking an Advanced Analysis Manager to lead data infrastructure and software engineering supporting the generation, analysis, and dissemination of genomics data
Hybrid | SF Bay Area | Apply by Aug 7
jobs.lbl.gov/jobs/advance...
@biosci.lbl.gov @berkeleylab.lbl.gov
Hybrid | SF Bay Area | Apply by Aug 7
jobs.lbl.gov/jobs/advance...
@biosci.lbl.gov @berkeleylab.lbl.gov