Aristilde Lab @ Northwestern Engineering
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Aristilde Lab @ Northwestern Engineering
@aristildelab.bsky.social
Unraveling Mechanisms of Environmental Organic Processes, Carbon and Nutrient Cycling and Recycling. #Metabolomics #Biogeochemistry #Biotechnology, Dr. Ludmilla Aristilde #BlkInEngineering #BlkinGeoscience
How do soil bacteria balance energy metabolism with carbon #metabolism in using #lignin carbons? Check out our @commsbio.nature.com article on how we figure out the "traffic jams" and "stoplights" in Pseudomonas metabolic reactions in lignin #carbon conversion.
Link: www.nature.com/articles/s42...
September 8, 2025 at 4:10 PM
Curious about how certain soils can retain moisture for a long time? Check out our article in @pnasnexus.org on how organic matter facilitates trapping of water in soil mineral nanopores. Funded by @iinanonu.bsky.social and National Science Foundation. Article link: academic.oup.com/pnasnexus/ar...
August 31, 2025 at 5:07 PM
Pseudomonas putida preprint alert: We provide a quantitative blueprint of #carbon and #energy fluxes for the native metabolism of #lignin aromatics: ferulate, coumarate, vanillate, and hydroxybenzoate.
www.biorxiv.org/content/10.1...
April 4, 2025 at 8:40 PM
Professor Ludmilla Aristilde and her team unraveled natural mineral catalysts as a new pathway to convert phosphorus from its organic to its inorganic form, which could improve agricultural sustainability as phosphorus supplies dwindle.

www.mccormick.northwestern.edu/news/article...
Iron Oxides Act as Natural Catalysts to Unlock Phosphorus to Fuel Plant Growth
A new study by Professor Ludmilla Aristilde found that minerals drive phosphorus release at enzyme-like rates.
www.mccormick.northwestern.edu
March 6, 2025 at 3:54 PM
How fast and how efficient can iron oxides catalyze phosphate cleavage from ribonucleotides? Our latest publication presents rates and turnover numbers for #enzyme-like reaction by #iron oxides, a missing piece of the #phosphorus cycle.
pubs.acs.org/doi/10.1021/...
Quantitative Benchmarking of Catalytic Parameters for Enzyme-Mimetic Ribonucleotide Dephosphorylation by Iron Oxide Minerals
Iron oxides, which are documented phosphorus (P) sinks as adsorbents, have been shown to catalyze organic P dephosphorylation, implicating these minerals as catalytic traps in P cycling. However, quantitative evaluation of this abiotic catalysis is lacking. Here, we investigated the dephosphorylation kinetics of eight ribonucleotides, with different nucleobase structures and P stoichiometry, reacting with common iron oxides. X-ray absorption spectroscopy determined that 0–98% of mineral-bound P was recycled inorganic P (Pi). Matrix-assisted laser desorption/ionization with mass spectrometry demonstrated short-lived triphosphorylated and monophosphorylated ribonucleotides bound to goethite. Based on Michaelis-Menten type modeling of the kinetic evolution of both dissolved and mineral-bound Pi, maximal Pi production rates from triphosphorylated ribonucleotides reacted with goethite (1.9–16.1 μmol Pi h–1 ggoethite–1) were >5-fold higher than with hematite and ferrihydrite; monophosphorylated ribonucleotides generated only mineral-bound Pi at similar rates (0.0–12.9 μmol Pi h–1 gmineral–1) across minerals. No clear distinction was observed between purine-based and pyrimidine-based ribonucleotides. After normalization to mineral-dependent Pi binding capacity, resulting catalytic turnover rates implied surface chemistry-controlled reactivity. Ribonucleotide–mineral complexation mechanisms were identified with infrared spectroscopy and molecular modeling. We estimated iron oxide-catalyzed rates in soil (0.01–5.5 μmol Pi h–1 gsoil) comparable to reported soil phosphatase rates, highlighting both minerals and enzymes as relevant catalysts in P cycling.
pubs.acs.org
March 5, 2025 at 2:48 AM
Aristilde Lab....Fall 2024 Group Picture
November 16, 2024 at 8:45 PM