Rhydian Windsor
@rwinds.bsky.social
ML Research Scientist at Oxford Nanopore Technologies, mostly working on assembly & variant calling 🧬
Erstwhile physicist and computer vision DPhil @Oxford_VGG 👁️💻
Average chess player and runner.
Erstwhile physicist and computer vision DPhil @Oxford_VGG 👁️💻
Average chess player and runner.
Reposted by Rhydian Windsor
Dorado v0.9.5 adds support for Nvidia Blackwell GPUs. Alongside the latest generation, we’ve given Volta & Orin a boost, v5 transformer sup >2X, LSTM hac on Hopper is boosted 20%, dorado correct and polish both receive performance updates, plus a whole bunch more; see..
github.com/nanoporetech...
github.com/nanoporetech...
Release v0.9.5 · nanoporetech/dorado
[0.9.5] (31 March 2025)
This release of Dorado delivers significant performance improvements and broader hardware support:
Major speed increase of the v5 SUP basecalling models on Volta (7.0) and ...
github.com
April 1, 2025 at 9:47 AM
Dorado v0.9.5 adds support for Nvidia Blackwell GPUs. Alongside the latest generation, we’ve given Volta & Orin a boost, v5 transformer sup >2X, LSTM hac on Hopper is boosted 20%, dorado correct and polish both receive performance updates, plus a whole bunch more; see..
github.com/nanoporetech...
github.com/nanoporetech...
Awesome to see the assembly polishing models we've been working on the last couple of months finally out there - we've had some really promising results with these internally so keen to see how others get on with them!
🎄 New Dorado release (v0.9.0) – and it's big!
🚀 Dorado polish command (experimental) for improving draft assemblies – faster & more accurate than Medaka
⚡ Faster modified base calling models
🔧 Usability & accuracy improvements: PolyA, Barcoding, 6mA calling
github.com/nanoporetech...
🚀 Dorado polish command (experimental) for improving draft assemblies – faster & more accurate than Medaka
⚡ Faster modified base calling models
🔧 Usability & accuracy improvements: PolyA, Barcoding, 6mA calling
github.com/nanoporetech...
Release v0.9.0 · nanoporetech/dorado
[0.9.0] (16 Dec 2024)
This major release of Dorado introduces several new features and enhancements. The polish command, currently experimental, is optimised for refining draft assemblies of human ...
github.com
December 17, 2024 at 3:33 PM
Awesome to see the assembly polishing models we've been working on the last couple of months finally out there - we've had some really promising results with these internally so keen to see how others get on with them!
Reposted by Rhydian Windsor
Interested in a career in science or technology?
This summer we’re offering hands-on experience alongside our talented teams with our 2025 internships.
Click to see our availability here: nanoporetech.com/about/career...
This summer we’re offering hands-on experience alongside our talented teams with our 2025 internships.
Click to see our availability here: nanoporetech.com/about/career...
December 11, 2024 at 4:14 PM
Interested in a career in science or technology?
This summer we’re offering hands-on experience alongside our talented teams with our 2025 internships.
Click to see our availability here: nanoporetech.com/about/career...
This summer we’re offering hands-on experience alongside our talented teams with our 2025 internships.
Click to see our availability here: nanoporetech.com/about/career...
Was awesome to go to Boston and talk at NCM2024 about our new models for genome assembly polishing - stay tuned for more on this soon 👀
At @nanoporetech.com, we've used ML to achieve remarkable advancements in basecalling. Now, we're focusing on driving further improvements in consensus and variant calling, enhancing both speed and accuracy. Watch @rwinds.bsky.social update on our progress: www.youtube.com/watch?v=IB6D...
Secondary analysis update
YouTube video by Oxford Nanopore Technologies
www.youtube.com
November 24, 2024 at 1:48 PM
Was awesome to go to Boston and talk at NCM2024 about our new models for genome assembly polishing - stay tuned for more on this soon 👀
