Patrick B.
@nanopat.bsky.social
Interested in Nanopores, RNA and 3d printing - amphibious (wet and dry lab) Scientist
Reposted by Patrick B.
WarpDemuX-tRNA: barcode multiplexing for nanopore tRNA sequencing https://www.biorxiv.org/content/10.1101/2025.03.21.644602v1
March 24, 2025 at 1:46 AM
WarpDemuX-tRNA: barcode multiplexing for nanopore tRNA sequencing https://www.biorxiv.org/content/10.1101/2025.03.21.644602v1
Reposted by Patrick B.
The first molecular evidence of Arabian leopards previously thought extinct ➡️
So pleased to share Dr Nabil Amor's conservation work across North Africa!
He's changing eDNA sampling in remote locations, and sharing these skills via African BioGenome Project.
🔗 bento.bio/story/decodi...
So pleased to share Dr Nabil Amor's conservation work across North Africa!
He's changing eDNA sampling in remote locations, and sharing these skills via African BioGenome Project.
🔗 bento.bio/story/decodi...
March 14, 2025 at 2:27 PM
The first molecular evidence of Arabian leopards previously thought extinct ➡️
So pleased to share Dr Nabil Amor's conservation work across North Africa!
He's changing eDNA sampling in remote locations, and sharing these skills via African BioGenome Project.
🔗 bento.bio/story/decodi...
So pleased to share Dr Nabil Amor's conservation work across North Africa!
He's changing eDNA sampling in remote locations, and sharing these skills via African BioGenome Project.
🔗 bento.bio/story/decodi...
Reposted by Patrick B.
MoDorado: Enhanced detection of tRNA modifications in nanopore sequencing by off-label use of modification callers https://www.biorxiv.org/content/10.1101/2025.02.18.638820v1
February 23, 2025 at 12:18 AM
MoDorado: Enhanced detection of tRNA modifications in nanopore sequencing by off-label use of modification callers https://www.biorxiv.org/content/10.1101/2025.02.18.638820v1
Reposted by Patrick B.
🧬🖥️ We are hosting free bioinformatics office hours on Feb 19th at 10am-noon PST. Bring your bioinformatics career or technical questions, and @robert.bio and I will try to answer them.
Sign up here: tally.so/r/mOb6dM
Please share especially with students and early career scientists!
Sign up here: tally.so/r/mOb6dM
Please share especially with students and early career scientists!
February 10, 2025 at 8:15 PM
🧬🖥️ We are hosting free bioinformatics office hours on Feb 19th at 10am-noon PST. Bring your bioinformatics career or technical questions, and @robert.bio and I will try to answer them.
Sign up here: tally.so/r/mOb6dM
Please share especially with students and early career scientists!
Sign up here: tally.so/r/mOb6dM
Please share especially with students and early career scientists!
Reposted by Patrick B.
Congrats to @kibeanuja.bsky.social on receiving a Field Study Fellowship from @www.helmholtz.de! With her project “AE for gene therapy”, the #HIRI postdoc aims to advance a genome editing method that safely and precisely corrects mutations without cutting DNA: www.helmholtz-hiri.de/en/newsroom/...
January 31, 2025 at 9:19 AM
Congrats to @kibeanuja.bsky.social on receiving a Field Study Fellowship from @www.helmholtz.de! With her project “AE for gene therapy”, the #HIRI postdoc aims to advance a genome editing method that safely and precisely corrects mutations without cutting DNA: www.helmholtz-hiri.de/en/newsroom/...
Omg, I've been looking for something like this for soooo long! Amazing work and documentation, can't wait to build one.
Hey #HiSciSky 👋.
I'm a post-doc researcher with a background in scientific device dev.
I have just released an open-source STEM-Education project for a $40, 3D-printed, DNA fluorometer with ng/uL levels of sensitivity. Follow for updates!
GitHub Repo: github.com/traulab/DIYN...
#DIYNAFLUOR #STEM
I'm a post-doc researcher with a background in scientific device dev.
I have just released an open-source STEM-Education project for a $40, 3D-printed, DNA fluorometer with ng/uL levels of sensitivity. Follow for updates!
GitHub Repo: github.com/traulab/DIYN...
#DIYNAFLUOR #STEM
December 9, 2024 at 1:05 PM
Omg, I've been looking for something like this for soooo long! Amazing work and documentation, can't wait to build one.
Our solution for dRNA multiplexing - so fast it runs on any laptop, and so accurate that we could demux even super low abundance samples with high specificity!
And imho the coolest thing? We've also run dRNA live barcode balancing with it 👀
And imho the coolest thing? We've also run dRNA live barcode balancing with it 👀
Demultiplexing and barcode-specific adaptive sampling for nanopore direct RNA sequencing https://www.biorxiv.org/content/10.1101/2024.07.22.604276v1
Demultiplexing and barcode-specific adaptive sampling for nanopore direct RNA sequencing https://www.biorxiv.org/content/10.1101/2024.07.22.604276v1
Nanopore direct RNA sequencing (dRNA-seq) enables unique insights into (epi-)transcriptomics. Howeve
www.biorxiv.org
July 24, 2024 at 7:45 AM
Our solution for dRNA multiplexing - so fast it runs on any laptop, and so accurate that we could demux even super low abundance samples with high specificity!
And imho the coolest thing? We've also run dRNA live barcode balancing with it 👀
And imho the coolest thing? We've also run dRNA live barcode balancing with it 👀