@khrovatin.bsky.social
To build a great model, one needs to take on the hat of a user. With Maximilian Rokuss, Fabian Isensee, Hallee E. Wong, and Anwesa Choudhuri we discussed how they did this for interactive segmentation.
The insights they shared are presented in this blog post: hrovatin.github.io/posts/intera...
The insights they shared are presented in this blog post: hrovatin.github.io/posts/intera...
Model interactions for interactive segmentation
Building models through a magnifying glass.
hrovatin.github.io
June 9, 2025 at 7:14 AM
To build a great model, one needs to take on the hat of a user. With Maximilian Rokuss, Fabian Isensee, Hallee E. Wong, and Anwesa Choudhuri we discussed how they did this for interactive segmentation.
The insights they shared are presented in this blog post: hrovatin.github.io/posts/intera...
The insights they shared are presented in this blog post: hrovatin.github.io/posts/intera...
There is no reason to stay bound to one programming language. I discussed ways to ease R-Python interoperability with Luke Zappia, Philipp Angerer, Tomasz Kalinowski.
Their tips and tricks are collected in this blog: hrovatin.github.io/posts/r_pyth...
@lazappi.bsky.social @t-kalinowski.bsky.social
Their tips and tricks are collected in this blog: hrovatin.github.io/posts/r_pyth...
@lazappi.bsky.social @t-kalinowski.bsky.social
From R to Python with minimal baggage
Getting the best of both worlds.
hrovatin.github.io
April 28, 2025 at 5:13 AM
There is no reason to stay bound to one programming language. I discussed ways to ease R-Python interoperability with Luke Zappia, Philipp Angerer, Tomasz Kalinowski.
Their tips and tricks are collected in this blog: hrovatin.github.io/posts/r_pyth...
@lazappi.bsky.social @t-kalinowski.bsky.social
Their tips and tricks are collected in this blog: hrovatin.github.io/posts/r_pyth...
@lazappi.bsky.social @t-kalinowski.bsky.social
To figure out what it takes to make flow matching models solve single-cell biology questions, I discussed with Alessandro Palma, Doron Haviv, and Lazar Atanackovic.
The insights they shared are presented here: tinyurl.com/278s5m58
@dorontheviking.bsky.social @lazaratan.bsky.social
The insights they shared are presented here: tinyurl.com/278s5m58
@dorontheviking.bsky.social @lazaratan.bsky.social
Matching flows to data
Models that fit like water in a vessel.
tinyurl.com
February 24, 2025 at 5:58 AM
To figure out what it takes to make flow matching models solve single-cell biology questions, I discussed with Alessandro Palma, Doron Haviv, and Lazar Atanackovic.
The insights they shared are presented here: tinyurl.com/278s5m58
@dorontheviking.bsky.social @lazaratan.bsky.social
The insights they shared are presented here: tinyurl.com/278s5m58
@dorontheviking.bsky.social @lazaratan.bsky.social
To bring to light data science topics that usually don’t make it into publications I started a blog on this topic: hrovatin.github.io By interviewing different researchers, I plan to find out what is going on in the community.
Karin Hrovatin
Data science blog on topics that don’t get published.
hrovatin.github.io
December 16, 2024 at 6:59 AM
To bring to light data science topics that usually don’t make it into publications I started a blog on this topic: hrovatin.github.io By interviewing different researchers, I plan to find out what is going on in the community.
Excited to see that our effort to write down all our atlassing experience is finally published.
1/7 Planning to build a single-cell atlas? Or wondering how atlases can be useful to your research? Read our guide on single-cell atlases www.nature.com/articles/s41... published in Nature Methods, by @lisasikkema.bsky.social, @khrovatin.bsky.social, Malte Luecken, @fabiantheis.bsky.social et al.
December 13, 2024 at 10:44 AM
Excited to see that our effort to write down all our atlassing experience is finally published.