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Reposted by Guillaume Jacquemet

The Meshwork @themeshwork.bsky.social · 23h

🧬 Join us for the 1st 2025-2026 #TheMeshworkTalk!
Dr. @johannaienglund.bsky.social (University of Helsinki) will dive into how basement membrane influences breast cancer onset and progression 💜
📅 Oct 22
🕣 8:30 ET | 14:30 CET
Register with the QR code or click here: t.co/D4zVgsrObf

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Guillaume Jacquemet @guijacquemet.bsky.social · 1d

Looks like a fantastic meeting!

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Matthias Krause @matthias-krause.bsky.social · 3d

Register for the Dynamic Cell VI conference, Reading, UK, April 2026! This conference focusses on all aspects of cell dynamics, co-organised by @bscb-official.bsky.social and @biochemsoc.bsky.social with @royalmicrosoc.bsky.social and the Chinese Society for Cell Biology.
bit.ly/Dynamic-Cell-VI

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Christophe de La Roche Saint-André @kiki2laro.bsky.social · 3d

Biologistes, chimistes, physiciens, informaticiens, mathématiciens ... toute la palette des #scientifiques intéressés par le monde de l' #imagerie de la #cellule est présente à #Seignosse pour le #MifoBio, du 10 au 17 octobre.
🔬😁

france3-regions.franceinfo.fr/nouvelle-aqu...

"On est obligé de refuser des gens !" : 350 chercheurs et scientifiques du monde entier réunis dans les Landes pendant une semaine

350 chercheurs, ingénieurs, mathématiciens, chimistes, biologiques, physiciens... vont passer huit jours ensemble à Seignosse, du 10 au 17 octobre. L'objectif : partager leurs savoirs. Ce rassemblemen...

france3-regions.franceinfo.fr

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Reposted by Guillaume Jacquemet

Turku BioImaging @turkubioimaging.bsky.social · 3d

🚀Join Helsinki BioImaging as an Image Analysis Specialist🖥️to support cross-disciplinary image analysis projects. If you love coding and are interested in working at the crossroads of computer science and biology, apply by 🗓️ November 15, 2025⤵️
jobs.helsinki.fi/job/Helsinki...
#jobopening

Image Analysis Specialist/Engineer/Coordinator, Helsinki Bioimaging

jobs.helsinki.fi

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Reposted by Guillaume Jacquemet

Journal of Cell Science @jcellsci.bsky.social · 4d

It won’t take you years to publish your work in JCS: most articles go from submission to acceptance in under 4 months. We also show a strong commitment at first decision, with over 95% of revisions being accepted. Find out more: journals.biologists.com/jcs/pages/re...
#forscientists
#notforprofit

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ilastik-team.bsky.social @ilastik-team.bsky.social · 4d

Segment large images without tiling artifacts: sharing our work that should have been presented at ICCV in 2 weeks - the brilliant first author Elena can’t go because of visa issues.
The paper: arxiv.org/abs/2503.19545 1/🧵

Large images have to be broken into tiles both for training and inference with neural networks. The tile predictions then need to be merged to produce the final volume prediction.

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Sara McArdle @saramcardle.bsky.social · 5d

I'm thrilled to share that our work studying microglia morphological changes in early Alzheimer's in mice is up!
www.biorxiv.org/content/10.1...

Unmasking Early Microglial Remodeling in an Alzheimer's Disease Mouse Model

Early neuroimmune remodeling is a critical yet understudied component of Alzheimer's disease (AD) pathogenesis. To investigate microglial contributions to AD development prior to overt plaque depositi...

www.biorxiv.org

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Guillaume Jacquemet @guijacquemet.bsky.social · 6d

We just had a joint lab meeting with JY's lab. They are doing very exciting work. This is the place to be!!

Jean-Yves Tinevez @jytinevez.bsky.social · 6d

Job alert!

We are looking for a bioimage analysis to work in an image analysis core facility in beautiful Paris. Can I ask you to share this opportunity with your networks?

See also on the forum:
forum.image.sc/t/research-e...

Research engineer in Bioimage Analysis for the researchers of the inIdEx FORMULA

Hi all We are looking for a bioimage analysis to work in an image analysis core facility in beautiful Paris. Can I ask you to share this opportunity with your networks? The position is in the Instit...

forum.image.sc

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Reposted by Guillaume Jacquemet

Jean-Yves Tinevez @jytinevez.bsky.social · 6d

Job alert!

We are looking for a bioimage analysis to work in an image analysis core facility in beautiful Paris. Can I ask you to share this opportunity with your networks?

See also on the forum:
forum.image.sc/t/research-e...

Research engineer in Bioimage Analysis for the researchers of the inIdEx FORMULA

Hi all We are looking for a bioimage analysis to work in an image analysis core facility in beautiful Paris. Can I ask you to share this opportunity with your networks? The position is in the Instit...

forum.image.sc

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Reposted by Guillaume Jacquemet

Journal of Cell Science @jcellsci.bsky.social · 11d

Mario Ledesma-Terrón, Diego Pérez-Dones, David Míguez and colleagues @cbm-csic-uam.bsky.social @ifimacuam.bsky.social present OSCAR, a framework to quantify 3D stacks with high cellular density.
journals.biologists.com/jcs/article-...

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Guillaume Jacquemet @guijacquemet.bsky.social · 12d

An old one, but still the one to beat IMO www.hetnatuurhistorisch.nl/fileadmin/us...

www.hetnatuurhistorisch.nl

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Reposted by Guillaume Jacquemet

Sara Wickstrom @sarawickstrom.bsky.social · 14d

How do #stemcells integrate information to coordinate fate decisions? Delighted to finally see our work showing how growth factors regulate the mechano-osmotic state of the #nucleus and #chromatin to control #pluripotency exit out! www.nature.com/articles/s41... see 🧵 👇

Mechano-osmotic signals control chromatin state and fate transitions in pluripotent stem cells - Nature Cell Biology

McCreery, Stubb et al. show that mechano-osmotic changes in the nucleus induce general transcriptional repression and prime chromatin for cell fate transitions by relieving repression of specific differentiation genes.

www.nature.com

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Reposted by Guillaume Jacquemet

Ignacio Arganda-Carreras @iarganda.bsky.social · 14d

📣 We’re hiring, please RT! Fully funded 4-year PhD position in our CVPD group at @informatikaehu.bsky.social!

Research at the intersection of AI, deep learning & bioimage analysis. 🧠🔬

📅 Applications open Oct 6 (deadline: ~Oct 27)
📍 San Sebastian, Spain.
👉 cvpd.github.io/post/2025-09...

📢 Open 4-year PhD Position in Deep Learning for Bioimage Analysis! | CVPD Research group

The Computer Vision and Pattern Discovery (CVPD) group at the University of the Basque Country (UPV/EHU) is offering a fully funded 4-year PhD position within the recently awarded project TOSBI: Towar...

cvpd.github.io

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Reposted by Guillaume Jacquemet

The Company of Biologists @biologists.bsky.social · 13d

We're still accepting submissions for our next special issue: Cell Biology of the Nucleus

Guest edited by Abby Buchwalter and JCS Editor Megan King.

Submission deadline: 3 November

Find out more: journals.biologists.com/jcs/pages/nu...

#CellBiology #Nucelus #Cells #Biology #Academia #Research

Special Issue: Cell Biology of the Nucleus
Guest Editor: Abby Buchwalter
Deadline 3 November 2025
Journal of Cell Science call for papers

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Biozentrum, University of Basel @biozentrum.unibas.ch · 14d

Assistant/Associate Professor in Structural Biology, Biophysics or Biological Imaging

www.biozentrum.unibas.ch/open-positio...

#biozentrum #University #Basel #Professor #Structural #Biology #Biophysics #Biological #Imaging

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Siân Culley @superresolusian.bsky.social · 15d

BioImage analysis friends - King's are recruiting for a full-time, permanent facility position! Come and work with fun microscopes and fun people (and me!) - please share! www.kcl.ac.uk/jobs/126345-...

Bioimage Analysis Specialist | King's College London

www.kcl.ac.uk

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David Brückner @davidbrueckner.bsky.social · 17d

How do cells navigate up gradients of adhesive proteins?
🤔

Termed "Haptotaxis", this effect is ubiquitous in cell migration, but it's mechanism was poorly understood

We show that passive friction directs cells & explains complex trajectories on gradients

👉 www.nature.com/articles/s41...

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Reposted by Guillaume Jacquemet

Jean-Yves Tinevez @jytinevez.bsky.social · Sep 10

Save the date! The @pasteur.fr Pasteur course on image analysis is announced:

It will happen from the 1st of June to the 5th 2026.

This year there will be only one track: the Early Career Investigator track (beginners). 👇

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Guillaume Jacquemet @guijacquemet.bsky.social · 17d

I love the poster 😊
In case it's helpful, we wrote this book chapter recently bioimagingai.janelia.org/9-train-mode...

9 How to Train and Use Deep Learning Models in Microscopy – AI in Microscopy: A BioImaging Guide

bioimagingai.janelia.org

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Reposted by Guillaume Jacquemet

Eugene Katrukha 🇺🇦 @ekatrukha.bsky.social · 17d

Back to work on #bigvolumebrowser, I've added the import of point clouds that change over time. The test data generation was a pleasant detour into the world of attractors (Thomas' cyclically symmetric is shown).

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eLife @elife.bsky.social · 17d

1/ Starting next year, @hhmi.org will require all authors to share their research as preprints under a CC BY 4.0 license as part of its new Immediate Access to Research policy.
buff.ly/NrHlEKD

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Reposted by Guillaume Jacquemet

Journal of Cell Biology @jcb.org · 18d

Kowalczyk et al. provide a historical perspective on the discovery of #desmosomes and how imaging technologies have advanced our understanding of this adhesive intercellular junction. rupress.org/jcb/article/...

📕 In our Intermediate Filaments collection: rupress.org/jcb/collecti...

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Reposted by Guillaume Jacquemet

Journal of Cell Science @jcellsci.bsky.social · Jul 9

Journal of Cell Science is published by a not-for-profit charitable organisation (@biologists.bsky.social)
that exists to benefit science, not shareholders. We provide Travelling Fellowships, Training Grants, support for ECRs and more.
For details, visit: journals.biologists.com/jcs/pages/re...

Image showing three covers of Journal of Cell Science

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Uri Manor @manorlaboratory.bsky.social · 19d

Pleased to share updates for 2 deep learning papers:
1/2: VASCilia, which can automatically segment and analyze cochlear hair cell stereocilia bundles. We have added more features to the Napari plugin and some new data highlighting the power of our high-throughput automated 3D analysis approach.

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