Allie Pearson
@alliepearson.bsky.social
Microbiology PhD candidate in the Keasling Lab at UC Berkeley
Reposted by Allie Pearson
We're excited to share FolDE, a low-N protein optimization method. In simulation, we found that FolDE is 55% more likely to identify top-1% hits than current baseline methods. FolDE is open and can be set up on a personal computer with a single command.
arxiv.org/abs/2510.24053
arxiv.org/abs/2510.24053
October 30, 2025 at 8:05 PM
We're excited to share FolDE, a low-N protein optimization method. In simulation, we found that FolDE is 55% more likely to identify top-1% hits than current baseline methods. FolDE is open and can be set up on a personal computer with a single command.
arxiv.org/abs/2510.24053
arxiv.org/abs/2510.24053
Happy to share that my paper, “RB-TnSeq elucidates dicarboxylic acid specific catabolism in β-proteobacteria for improved plastic monomer upcycling” is out! journals.asm.org/doi/10.1128/...
RB-TnSeq elucidates dicarboxylic-acid-specific catabolism in β-proteobacteria for improved plastic monomer upcycling | Applied and Environmental Microbiology
Upcycling the carbon in plastic wastes to value-added products is a promising approach
to address the plastic waste and climate crises, and dicarboxylic acid metabolism
is an important facet of severa...
journals.asm.org
September 24, 2025 at 12:06 AM
Happy to share that my paper, “RB-TnSeq elucidates dicarboxylic acid specific catabolism in β-proteobacteria for improved plastic monomer upcycling” is out! journals.asm.org/doi/10.1128/...