Uri Neri
@urineri.bsky.social
Meta/viromics.
RNA virology, Archaeal viruses, Linux and FOSS.
Currently a postdoc at the Joint Genome Institute (formerly at TAU)
RNA virology, Archaeal viruses, Linux and FOSS.
Currently a postdoc at the Joint Genome Institute (formerly at TAU)
@kosmopoulos.bsky.social @annizlab.bsky.social Hi! we are planning another benchmark run for using mappers/aligners for CRISPR spacer-protospacer analyses, I'll add a reminder to try x-mapper too :)
September 16, 2025 at 1:43 AM
@kosmopoulos.bsky.social @annizlab.bsky.social Hi! we are planning another benchmark run for using mappers/aligners for CRISPR spacer-protospacer analyses, I'll add a reminder to try x-mapper too :)
Reposted by Uri Neri
tinyurl.com/MIUViG2
Here's the MIUViG2 survey form!
If you're interested in sharing your experience to update MIUViG for RNA and ssDNA viruses.
Here's the MIUViG2 survey form!
If you're interested in sharing your experience to update MIUViG for RNA and ssDNA viruses.
MIUViG Update Survey
Since the development of the Minimum Information about an Uncultured Viral Genome (MIUViG) standard (Roux et al. 2019), there has been an explosion in the number of genomic data generated on unculture...
tinyurl.com
May 11, 2025 at 2:17 PM
tinyurl.com/MIUViG2
Here's the MIUViG2 survey form!
If you're interested in sharing your experience to update MIUViG for RNA and ssDNA viruses.
Here's the MIUViG2 survey form!
If you're interested in sharing your experience to update MIUViG for RNA and ssDNA viruses.
Thanks! I'd say the conclusion is more like - use bowtie1 + one other tool just to be sure, and verify the alignments reported just in case.
May 19, 2025 at 2:44 PM
Thanks! I'd say the conclusion is more like - use bowtie1 + one other tool just to be sure, and verify the alignments reported just in case.