https://behindthebioinformatics.substack.com/
💥 MITEs: Tumor-activated immunocytokines that flip TAMs + supercharge T/NK cells
⏳ ACE: Explainable AI finds conserved aging genes across species
💥 MITEs: Tumor-activated immunocytokines that flip TAMs + supercharge T/NK cells
⏳ ACE: Explainable AI finds conserved aging genes across species
🧠 Neuro–immune crosstalk: Sensory neurons use TGF-β to shape macrophage identities for nerve repair
🧩 FADVI: Disentangles batch effects vs biology for cleaner single-cell & spatial integration
🧠 Neuro–immune crosstalk: Sensory neurons use TGF-β to shape macrophage identities for nerve repair
🧩 FADVI: Disentangles batch effects vs biology for cleaner single-cell & spatial integration
💬 CellHermes: Turns omics into natural language to unify encoding, prediction & explanation.
🗺️ CONCERT: Learns niche-aware perturbation responses
⚙️ Monod: Replaces heuristic scRNA-seq workflows with mechanistic transcription modeling.
💬 CellHermes: Turns omics into natural language to unify encoding, prediction & explanation.
🗺️ CONCERT: Learns niche-aware perturbation responses
⚙️ Monod: Replaces heuristic scRNA-seq workflows with mechanistic transcription modeling.
⚠️ High CIN fuels cancer non–cell-autonomously, promoting relapse
🗺️ STORIES learns "Waddington landscapes" from spatial transcriptomics
🔭 Early myeloid clusters predict if precancerous lesions regress/progress
⚠️ High CIN fuels cancer non–cell-autonomously, promoting relapse
🗺️ STORIES learns "Waddington landscapes" from spatial transcriptomics
🔭 Early myeloid clusters predict if precancerous lesions regress/progress
➡️ velotest puts RNA velocity visualizations to the test
🧠 CytoTRACE 2 decodes absolute cellular potency
🧩 scooby predicts multiomic cell profiles from DNA
💉 mRNA vaccines boost immunotherapy response
🐋 Bowhead whales fight cancer with DNA repair
➡️ velotest puts RNA velocity visualizations to the test
🧠 CytoTRACE 2 decodes absolute cellular potency
🧩 scooby predicts multiomic cell profiles from DNA
💉 mRNA vaccines boost immunotherapy response
🐋 Bowhead whales fight cancer with DNA repair
🧩 MIMA unifies any omics with AI-driven batch correction
🧱 fastCNV maps tumor CNVs from single-cell & spatial data—fast ⚡ & accurate
🌸 PHLOWER untangles complex differentiation trees from multimodal data
🧩 MIMA unifies any omics with AI-driven batch correction
🧱 fastCNV maps tumor CNVs from single-cell & spatial data—fast ⚡ & accurate
🌸 PHLOWER untangles complex differentiation trees from multimodal data
💊 Generative AI designs new antibiotics effective against superbugs
🍄 Shorkie: a fungal DNA LM that predicts gene expression from sequence alone
💊 Generative AI designs new antibiotics effective against superbugs
🍄 Shorkie: a fungal DNA LM that predicts gene expression from sequence alone
Big step toward AI-driven digital pathology and precision oncology.
Big step toward AI-driven digital pathology and precision oncology.
🔥 Tumor acidosis drives metabolic rewiring
🧠 Benchmarking 40 multimodal integration tools
📊 Self-supervised models face domain gaps in spatial data
🤖 scConcept, MrVI, & gReLU push single-cell AI & genomics design forward
🔥 Tumor acidosis drives metabolic rewiring
🧠 Benchmarking 40 multimodal integration tools
📊 Self-supervised models face domain gaps in spatial data
🤖 scConcept, MrVI, & gReLU push single-cell AI & genomics design forward