Mark Hibbins, Great Lakes Swashbuckler
@rejectresubmit.bsky.social
Assistant Professor at the University of Rochester | phylogenomics, genome evolution | EIC at Frontiers in Posting
Pinned
Hibbins Lab
mhibbins.github.io
I'm recruiting students / postdocs to join my new lab at the University of Rochester for Fall 2025 onwards! If you're interested in phylogenetic comparative methods, genome evolution, and/or computational biology, please get in touch! More info:
mhibbins.github.io
mhibbins.github.io
I may have neglected writing the documentation for this R package for a bit too long
a man with a beard and blue eyes is looking up at the sky in the dark .
ALT: a man with a beard and blue eyes is looking up at the sky in the dark .
media.tenor.com
November 12, 2025 at 10:21 PM
I may have neglected writing the documentation for this R package for a bit too long
clouds 😑
November 12, 2025 at 3:31 AM
clouds 😑
i like snow
November 11, 2025 at 6:37 PM
i like snow
Still a few more days to apply to our open faculty position! This is a stellar department to be an evolutionary geneticist. I've really enjoyed my time here so far. Feel free to DM if you have any questions!
apply.interfolio.com/173431
apply.interfolio.com/173431
Apply - Interfolio
{{$ctrl.$state.data.pageTitle}} - Apply - Interfolio
apply.interfolio.com
October 29, 2025 at 10:04 PM
Still a few more days to apply to our open faculty position! This is a stellar department to be an evolutionary geneticist. I've really enjoyed my time here so far. Feel free to DM if you have any questions!
apply.interfolio.com/173431
apply.interfolio.com/173431
I've seen riparian plots you people wouldn't believe
October 28, 2025 at 8:57 PM
I've seen riparian plots you people wouldn't believe
Not to post spoilers but the history of chromosomal rearrangements in Rumex is genuinely breaking my brain right now. Excited to share with y'all
October 28, 2025 at 8:53 PM
Not to post spoilers but the history of chromosomal rearrangements in Rumex is genuinely breaking my brain right now. Excited to share with y'all
🙃
October 23, 2025 at 4:30 PM
🙃
As a biologist I am pretty envious of the explanatory power of the "everyone is 12" theory
October 22, 2025 at 11:40 PM
As a biologist I am pretty envious of the explanatory power of the "everyone is 12" theory
Happy to chat with any potential applicants who want to work in plant phylogenomics!
Simons Postdoctoral Fellowships in Plant Biology
Simons Postdoctoral Fellowships in Plant Biology on Simons Foundation
www.simonsfoundation.org
October 14, 2025 at 1:10 PM
Happy to chat with any potential applicants who want to work in plant phylogenomics!
the lion does not concern himself with factor of 2 errors
October 8, 2025 at 5:16 PM
the lion does not concern himself with factor of 2 errors
Reposted by Mark Hibbins, Great Lakes Swashbuckler
New preprint led by grad student, Yu Mo! We introduce new software to calculate evolutionary rates of quantitative characters in the presence of discordance
1/
www.biorxiv.org/content/10.1...
1/
www.biorxiv.org/content/10.1...
Estimating the rate of quantitative trait evolution in the presence of gene tree discordance by calculating likelihoods across trees
Quantitative traits provide insights into how phenotypes evolve across species. However, standard comparative methods often assume a single species tree and overlook the discordant gene tree histories...
www.biorxiv.org
October 7, 2025 at 3:10 PM
New preprint led by grad student, Yu Mo! We introduce new software to calculate evolutionary rates of quantitative characters in the presence of discordance
1/
www.biorxiv.org/content/10.1...
1/
www.biorxiv.org/content/10.1...
First grant submitted 🙏
September 30, 2025 at 8:40 PM
First grant submitted 🙏
Reposted by Mark Hibbins, Great Lakes Swashbuckler
Memories of Lake Superior
Old Woman Bay, Ontario
July 2016
#WeekNforNights #AlphabetChallenge #EastCoastKin #sunset #ShareCanGeo #blueskyphotography #PukaskwaNP #LakeSuperior
Old Woman Bay, Ontario
July 2016
#WeekNforNights #AlphabetChallenge #EastCoastKin #sunset #ShareCanGeo #blueskyphotography #PukaskwaNP #LakeSuperior
September 29, 2025 at 12:47 PM
Memories of Lake Superior
Old Woman Bay, Ontario
July 2016
#WeekNforNights #AlphabetChallenge #EastCoastKin #sunset #ShareCanGeo #blueskyphotography #PukaskwaNP #LakeSuperior
Old Woman Bay, Ontario
July 2016
#WeekNforNights #AlphabetChallenge #EastCoastKin #sunset #ShareCanGeo #blueskyphotography #PukaskwaNP #LakeSuperior
Looks like only first year grads can apply now
It seems the GRFP solicitation is FINALLY released (like 5 minutes ago)! Due dates have also been pushed back, thankfully! 🧪 🔭
www.nsf.gov/funding/oppo...
www.nsf.gov/funding/oppo...
NSF Graduate Research Fellowship Program (GRFP)
www.nsf.gov
September 26, 2025 at 4:37 PM
Looks like only first year grads can apply now
The Board of Coalescence is nearly full
September 25, 2025 at 7:30 PM
The Board of Coalescence is nearly full
UR Biology is hiring an Assistant Professor in mathematical/computational evolutionary genetics. Join us!
apply.interfolio.com/173431
apply.interfolio.com/173431
Apply - Interfolio
{{$ctrl.$state.data.pageTitle}} - Apply - Interfolio
apply.interfolio.com
September 24, 2025 at 4:07 PM
UR Biology is hiring an Assistant Professor in mathematical/computational evolutionary genetics. Join us!
apply.interfolio.com/173431
apply.interfolio.com/173431
too many documents
September 23, 2025 at 8:53 PM
too many documents
Reposted by Mark Hibbins, Great Lakes Swashbuckler
super excited to share this big project with @daeaton.bsky.social out now in Systematic Biology! We derived distributions for -- given an arbitrary species tree model -- how far you have to move along a genome before observing a change in the underlying genealogy: doi.org/10.1093/sysb...
Estimating waiting distances between genealogy changes under a Multi-Species Extension of the Sequentially Markov Coalescent
Abstract. Genomes are composed of a mosaic of segments inherited from different ancestors, each separated by past recombination events. Consequently, genea
doi.org
September 11, 2025 at 7:36 PM
super excited to share this big project with @daeaton.bsky.social out now in Systematic Biology! We derived distributions for -- given an arbitrary species tree model -- how far you have to move along a genome before observing a change in the underlying genealogy: doi.org/10.1093/sysb...
writing a phylogenetics-oriented grant without using the word "diversity" or any of its derivatives
a cartoon of spongebob holding a pencil and writing on a piece of paper
ALT: a cartoon of spongebob holding a pencil and writing on a piece of paper
media.tenor.com
September 9, 2025 at 9:47 PM
writing a phylogenetics-oriented grant without using the word "diversity" or any of its derivatives
when the first September hits as a new PI
a man with a beard and blue eyes is looking up at the sky in a dark room .
ALT: a man with a beard and blue eyes is looking up at the sky in a dark room .
media.tenor.com
September 8, 2025 at 6:56 PM
when the first September hits as a new PI
Reposted by Mark Hibbins, Great Lakes Swashbuckler
Please share broadly: I am looking for a postdoctoral fellow to work on a collaborative project on the temporal population genomics of invasive Capeweed (using contemporary and herbarium genomics), with @shaky-dingo.bsky.social and colleagues
August 27, 2025 at 12:09 PM
Please share broadly: I am looking for a postdoctoral fellow to work on a collaborative project on the temporal population genomics of invasive Capeweed (using contemporary and herbarium genomics), with @shaky-dingo.bsky.social and colleagues
Reposted by Mark Hibbins, Great Lakes Swashbuckler
I'm a little bit late, but happy to see this new paper led by @imillercrews.bsky.social and anchored by @rosvall-lab.bsky.social now out on bioRxiv.
We analyze comparative songbird RNA-seq data using new features in our software package, CAGEE. Check it out!
www.biorxiv.org/content/10.1...
We analyze comparative songbird RNA-seq data using new features in our software package, CAGEE. Check it out!
www.biorxiv.org/content/10.1...
How sex shapes transcriptome evolution in the songbird brain
Sex differences have captivated scientists for a long time, yet the evolutionary rate of change in sex-biased gene expression has not been directly quantified. To address this issue, we leverage brain...
www.biorxiv.org
August 27, 2025 at 1:24 PM
I'm a little bit late, but happy to see this new paper led by @imillercrews.bsky.social and anchored by @rosvall-lab.bsky.social now out on bioRxiv.
We analyze comparative songbird RNA-seq data using new features in our software package, CAGEE. Check it out!
www.biorxiv.org/content/10.1...
We analyze comparative songbird RNA-seq data using new features in our software package, CAGEE. Check it out!
www.biorxiv.org/content/10.1...
Being a PI is definitely a step up in responsibility and workload but so far I am really enjoying it. I'm being challenged in an incredibly fulfilling way that I haven't felt probably since I was a first year grad student.
August 25, 2025 at 5:22 PM
Being a PI is definitely a step up in responsibility and workload but so far I am really enjoying it. I'm being challenged in an incredibly fulfilling way that I haven't felt probably since I was a first year grad student.
Real Northerners know that the two week stretch including the last week of August and the first week of September has the best weather of any time of the year
August 25, 2025 at 1:37 PM
Real Northerners know that the two week stretch including the last week of August and the first week of September has the best weather of any time of the year
I'm hiring a postdoc to work in theoretical / computational phylogenomics! More info at tinyurl.com/63hb5ew8. Please share!
August 21, 2025 at 12:52 PM
I'm hiring a postdoc to work in theoretical / computational phylogenomics! More info at tinyurl.com/63hb5ew8. Please share!