Yajuan Lin
@linyajuan.bsky.social
Biological oceanographer. Assistant Professor at Texas A&M University Corpus Christi. Lab website: https://yajuanlin.github.io/
Reposted by Yajuan Lin
I am very happy (and anxious) to share with you our most recent work in which we evaluated four of the most popular long-read assemblers,
www.biorxiv.org/content/10.1...
and tell you just a little bit about it in the following 🧵
www.biorxiv.org/content/10.1...
and tell you just a little bit about it in the following 🧵
Assemblies of long-read metagenomes suffer from diverse errors
Genomes from metagenomes have revolutionised our understanding of microbial diversity, ecology, and evolution, propelling advances in basic science, biomedicine, and biotechnology. Assembly algorithms...
www.biorxiv.org
April 28, 2025 at 8:08 AM
I am very happy (and anxious) to share with you our most recent work in which we evaluated four of the most popular long-read assemblers,
www.biorxiv.org/content/10.1...
and tell you just a little bit about it in the following 🧵
www.biorxiv.org/content/10.1...
and tell you just a little bit about it in the following 🧵
Reposted by Yajuan Lin
Postdoc position available studying the biological carbon pump within Jan Taucher's team at GEOMAR
🌊
www.geomar.de/en/karriere/...
🌊
www.geomar.de/en/karriere/...
Postdoc (m/f/d) position in ocean biogeochemistry
www.geomar.de
March 24, 2025 at 9:58 PM
Postdoc position available studying the biological carbon pump within Jan Taucher's team at GEOMAR
🌊
www.geomar.de/en/karriere/...
🌊
www.geomar.de/en/karriere/...
Reposted by Yajuan Lin
A great story (and another reason to Stand up for Science ... as if you needed more)! standupforscience2025.org
March 3, 2025 at 6:18 PM
A great story (and another reason to Stand up for Science ... as if you needed more)! standupforscience2025.org
Stand UP for Science on March 7 at 12:00! Find your city event here: bsky.app/profile/stan...
#StandUpforScience2025
#StandUpforScience2025
WHERE WILL YOU BE ON MARCH 7TH!?
Head to www.standupforscience2025.org/local-event-information/ or the link in our bio to find your closest event—or add one if you're hosting one!
#standupforscience2025
Head to www.standupforscience2025.org/local-event-information/ or the link in our bio to find your closest event—or add one if you're hosting one!
#standupforscience2025
March 3, 2025 at 12:11 AM
Stand UP for Science on March 7 at 12:00! Find your city event here: bsky.app/profile/stan...
#StandUpforScience2025
#StandUpforScience2025
Reposted by Yajuan Lin
If you have been using #anvio to analyze your microbial pangenomes, we have a new program for you to calculate rarefaction curves or Heaps' Law fit for your gene clusters:
anvio.org/help/main/pr...
Sorry it took this long :/ But at least t will run on any existing anvi'o pangenome :)
anvio.org/help/main/pr...
Sorry it took this long :/ But at least t will run on any existing anvi'o pangenome :)
March 2, 2025 at 3:13 PM
If you have been using #anvio to analyze your microbial pangenomes, we have a new program for you to calculate rarefaction curves or Heaps' Law fit for your gene clusters:
anvio.org/help/main/pr...
Sorry it took this long :/ But at least t will run on any existing anvi'o pangenome :)
anvio.org/help/main/pr...
Sorry it took this long :/ But at least t will run on any existing anvi'o pangenome :)
Reposted by Yajuan Lin
I am looking for a summer undergraduate intern to help out with harmful algal bloom monitoring in coastal GA! Fully funded internship and housing is available. Pls help spread the word! www.skio.uga.edu/undergraduat... #habs #REU #aquaticecology #internship #oceanography
Undergraduate Internships - Skidaway Institute of Oceanography
“The classroom is where we lay the foundation, but an internship at the Skidaway Institute provides the framework to build a... Read more »
www.skio.uga.edu
February 27, 2025 at 12:03 AM
I am looking for a summer undergraduate intern to help out with harmful algal bloom monitoring in coastal GA! Fully funded internship and housing is available. Pls help spread the word! www.skio.uga.edu/undergraduat... #habs #REU #aquaticecology #internship #oceanography
Support NOAA Marine Sanctuary Staff! They're incredible people doing vital work to protect our oceans. 🌊👏 actionnetwork.org/letters/tell...
Tell Elected Officials: Support NOAA Marine Sanctuary Staff!
Without public input, America has lost NOAA marine sanctuary scientists, enforcement officers, and conservation specialists who are the backbone of our nation’s marine protections, supporting critical...
actionnetwork.org
March 1, 2025 at 12:26 AM
Support NOAA Marine Sanctuary Staff! They're incredible people doing vital work to protect our oceans. 🌊👏 actionnetwork.org/letters/tell...
Reposted by Yajuan Lin
AGU urges the Trump administration to immediately renew U.S. federal commitment to climate science. The U.S. must restore critical climate science leadership for a secure, prosperous future for the country and the world.
Read AGU’s statement here: news.agu.org/press-releas...
Read AGU’s statement here: news.agu.org/press-releas...
February 28, 2025 at 11:44 PM
AGU urges the Trump administration to immediately renew U.S. federal commitment to climate science. The U.S. must restore critical climate science leadership for a secure, prosperous future for the country and the world.
Read AGU’s statement here: news.agu.org/press-releas...
Read AGU’s statement here: news.agu.org/press-releas...
Reposted by Yajuan Lin
Just out - The first global ocean 3-Domain microbial survey where all organisms can be directly compared quantitatively. Unfractionated and amplified from just 2 primers (vetted with mock communities and metagenomics), so all with the same denominator. www.biorxiv.org/content/10.1...
February 27, 2025 at 5:21 PM
Just out - The first global ocean 3-Domain microbial survey where all organisms can be directly compared quantitatively. Unfractionated and amplified from just 2 primers (vetted with mock communities and metagenomics), so all with the same denominator. www.biorxiv.org/content/10.1...
Reposted by Yajuan Lin
OCB-NASA PACE Hackweek – apply by March 24! A social coding event w/lectures, tutorials + project work (data processing+analysis) to kick-start research using the Earth science data streams from OCI, SPEXone, HARP2 instruments on PACE + other satellite data.
www.us-ocb.org/pace-hackwee...
www.us-ocb.org/pace-hackwee...
PACE Hackweek 2025 :: Ocean Carbon & Biogeochemistry
The NASA Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) Project and Ocean Carbon & Biogeochemistry (OCB) Program are hosting a second PACE Data
www.us-ocb.org
February 28, 2025 at 5:18 PM
OCB-NASA PACE Hackweek – apply by March 24! A social coding event w/lectures, tutorials + project work (data processing+analysis) to kick-start research using the Earth science data streams from OCI, SPEXone, HARP2 instruments on PACE + other satellite data.
www.us-ocb.org/pace-hackwee...
www.us-ocb.org/pace-hackwee...