Fabien Plisson
@fabienplisson.bsky.social
BioDesign, Machine Learning, Drug Discovery | Rosenkranz Award 2021 | Dad | Polyglot | Capybarist | plissonf.github.io
Founding ingeniebio.com
ORCID 0000-0003-224
Founding ingeniebio.com
ORCID 0000-0003-224
What a stunning view #SydneyOpera #Xmas
December 17, 2024 at 4:18 AM
What a stunning view #SydneyOpera #Xmas
Thanks to @sunnalab & @MQ_BDRC for inviting me to the symposium. I was very pleased to present our @CinvestavIra & @IngenieBio work in the #AI-driven peptide discovery & design. It stimulated some interesting questions over bias, representation learning, data scarcity and hype.
December 13, 2024 at 11:08 AM
Thanks to @sunnalab & @MQ_BDRC for inviting me to the symposium. I was very pleased to present our @CinvestavIra & @IngenieBio work in the #AI-driven peptide discovery & design. It stimulated some interesting questions over bias, representation learning, data scarcity and hype.
Whenever possible, we employ emerging tools for protein design like #AlphaFold or #RFDiffusion. Still, many challenges are unique to peptides—short half-life, limited oral bioavailability, toxicity—and sampling bias and data scarcity to the #ML modelling process. (2/3
December 13, 2024 at 11:08 AM
Whenever possible, we employ emerging tools for protein design like #AlphaFold or #RFDiffusion. Still, many challenges are unique to peptides—short half-life, limited oral bioavailability, toxicity—and sampling bias and data scarcity to the #ML modelling process. (2/3
Pleased to attend #ABACBS24 Symposium on Bioinformatics Excellence and Innovation #SBEI24 to see challenges in cloud computing, data mgt, #AI technology to #drugdiscovery research programs from @AWS, @googlecloud & bioinformatics facilities like @AusBiocommons @PeterMacCC
December 13, 2024 at 11:08 AM
Pleased to attend #ABACBS24 Symposium on Bioinformatics Excellence and Innovation #SBEI24 to see challenges in cloud computing, data mgt, #AI technology to #drugdiscovery research programs from @AWS, @googlecloud & bioinformatics facilities like @AusBiocommons @PeterMacCC
Fantastic view over Sydney CBD to attend @ProtoAxiom #ChallengerSummit2024 and meet like-minded people pushing forward the Australian #Biotechnology industry
December 13, 2024 at 11:07 AM
Fantastic view over Sydney CBD to attend @ProtoAxiom #ChallengerSummit2024 and meet like-minded people pushing forward the Australian #Biotechnology industry
I tried @notebooklm_pods with two of our recent peer-reviewed articles; it generated a 10-minute audio on structural bias in #ML-guided #peptide design with great accuracy. Enjoy!
substack.com/home/post/p-15…
substack.com/home/post/p-15…
December 13, 2024 at 11:07 AM
I tried @notebooklm_pods with two of our recent peer-reviewed articles; it generated a 10-minute audio on structural bias in #ML-guided #peptide design with great accuracy. Enjoy!
substack.com/home/post/p-15…
substack.com/home/post/p-15…
I am very pleased to have presented @peptidicos research work about #MachineLearning #peptidedesign at Macquarie Dementia Research Centre @MQ_DRC @Macquarie_Uni. Thanks @OleTietz. Beautiful campus.
December 13, 2024 at 11:07 AM
I am very pleased to have presented @peptidicos research work about #MachineLearning #peptidedesign at Macquarie Dementia Research Centre @MQ_DRC @Macquarie_Uni. Thanks @OleTietz. Beautiful campus.
Celebrando #VivaMexico con @SelFdz en Sídney, Australia.
December 13, 2024 at 11:06 AM
Celebrando #VivaMexico con @SelFdz en Sídney, Australia.
December 13, 2024 at 11:06 AM
Thanks to @RoySocChem + @LatinXChem for adding our seminal review, co-authored by @fersaldivar11, @DanielAldas, and @difacquim, to this themed collection.#LatinXChem #naturalproducts #drugdiscovery #machinelearning #artificial_intelligence
shorturl.at/zJIaX
shorturl.at/zJIaX
December 13, 2024 at 11:06 AM
Thanks to @RoySocChem + @LatinXChem for adding our seminal review, co-authored by @fersaldivar11, @DanielAldas, and @difacquim, to this themed collection.#LatinXChem #naturalproducts #drugdiscovery #machinelearning #artificial_intelligence
shorturl.at/zJIaX
shorturl.at/zJIaX
This Thursday, I will present @UNSWBABS our research on #MachineLearning guided peptide design and how we monitor existing #bias in biological data and tackle it to develop more informed ML/DL models. #XAI #AMR #peptide2drug
December 13, 2024 at 11:06 AM
This Thursday, I will present @UNSWBABS our research on #MachineLearning guided peptide design and how we monitor existing #bias in biological data and tackle it to develop more informed ML/DL models. #XAI #AMR #peptide2drug
Traversée des rues de Montréal en découvrant avec mini-moi les statues du #Mignonisme de @Katerin55468086. Le premier Monsieur Rose est dans l'hôtel Fairmont #artwork #contemporain
December 13, 2024 at 11:06 AM
Traversée des rues de Montréal en découvrant avec mini-moi les statues du #Mignonisme de @Katerin55468086. Le premier Monsieur Rose est dans l'hôtel Fairmont #artwork #contemporain
Most predictive/generative #machinelearning models are built on #protein sequences. With @DanielAldas we developed a fast + parallelizable strategy to map the structural landscape of training set(s), giving you insights on structural constraints #XAI #AF2
doi.org/10.1039/D3DD00…
doi.org/10.1039/D3DD00…
December 13, 2024 at 11:06 AM
Most predictive/generative #machinelearning models are built on #protein sequences. With @DanielAldas we developed a fast + parallelizable strategy to map the structural landscape of training set(s), giving you insights on structural constraints #XAI #AF2
doi.org/10.1039/D3DD00…
doi.org/10.1039/D3DD00…
A clear and very informative talk by @DidiKieran on controllable generative modeling applied to #proteindesign #diffusion #EESAIBio
December 13, 2024 at 11:05 AM
A clear and very informative talk by @DidiKieran on controllable generative modeling applied to #proteindesign #diffusion #EESAIBio
Fascinating talk by Ania Di Pede @StefaniaDiPede on predicting the stability of plastic-degrading enzymes PETases using graph convolutional networks and Megascale data #proteinengineering #sustainability #circulareconomy #EESAIBio
December 13, 2024 at 11:05 AM
Fascinating talk by Ania Di Pede @StefaniaDiPede on predicting the stability of plastic-degrading enzymes PETases using graph convolutional networks and Megascale data #proteinengineering #sustainability #circulareconomy #EESAIBio
Catching up with the insightful talk by @mmbronstein on geometric #MachineLearning applied to protein binder design and function prediction #EESAIBio
December 13, 2024 at 11:05 AM
Catching up with the insightful talk by @mmbronstein on geometric #MachineLearning applied to protein binder design and function prediction #EESAIBio
One 2024 resolution down; my personal academic website incl. @peptidicos is finally up and working#peptide2drug #drugdiscovery #machinelearning #ArtificialIntelligence #datascience #datavis #AntimicrobialResistance #CancerResearch
plissonf.github.io
plissonf.github.io
December 13, 2024 at 11:04 AM
One 2024 resolution down; my personal academic website incl. @peptidicos is finally up and working#peptide2drug #drugdiscovery #machinelearning #ArtificialIntelligence #datascience #datavis #AntimicrobialResistance #CancerResearch
plissonf.github.io
plissonf.github.io
After 3 days at #ABACBS2023 enjoying #compbio and #ArtificialIntelligence talks, I took a short stroll to visit friends at #AlmaMater @IMBatUQ
December 13, 2024 at 11:04 AM
After 3 days at #ABACBS2023 enjoying #compbio and #ArtificialIntelligence talks, I took a short stroll to visit friends at #AlmaMater @IMBatUQ
The @CinvestavIra is opening faculty positions in biological sciences with research lines towards #FoodSecurity and #SustainableAgriculture. If you are an aspiring group leader like @CatedrasMx @EInvestigadores and your are passionate about these areas, check out the info.
December 13, 2024 at 11:03 AM
The @CinvestavIra is opening faculty positions in biological sciences with research lines towards #FoodSecurity and #SustainableAgriculture. If you are an aspiring group leader like @CatedrasMx @EInvestigadores and your are passionate about these areas, check out the info.
Come and see our @peptidicos works in #machinelearning and #chemoinformatics applied to peptide science (Posters 89, 335-338) @AusPeptide
December 13, 2024 at 11:03 AM
Come and see our @peptidicos works in #machinelearning and #chemoinformatics applied to peptide science (Posters 89, 335-338) @AusPeptide
G'day Sydney. I am in town for the next 10 days before #AusPeptide2023.
December 13, 2024 at 11:03 AM
G'day Sydney. I am in town for the next 10 days before #AusPeptide2023.
Moving back to Australia in late 2023, I am exploring new opportunities and collaborations with like-minded individuals in the research fields of #proteinengineering and #artificialintelligence, with a focus on #Health, #Energy, and #FoodSecurity. Feel free to reach out.
December 13, 2024 at 11:03 AM
Moving back to Australia in late 2023, I am exploring new opportunities and collaborations with like-minded individuals in the research fields of #proteinengineering and #artificialintelligence, with a focus on #Health, #Energy, and #FoodSecurity. Feel free to reach out.
