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Reposted by Pierre Poulain

prefix.dev @prefix.dev · 12h

In our little deep dive series we're now exploring how cross-compilation in the Conda ecosystem works: prefix.dev/blog/cross-c.... Back in the days, @conda-forge.org rolled this out widely to support osx-arm64 early on, and now for linux-aarch64/ppc64le.

Cross compiling in the Conda ecosystem

Cross compiling is a fundamental capability in modern software development, allowing developers to build packages for different architectures without needing access to the target hardware.

prefix.dev

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Reposted by Pierre Poulain

GeostatsGuy @geostatsguy.bsky.social · Dec 21

I’ve spent the past week refining my free e-book, Applied Geostatistics in Python 📚💻

glossary 📖, illustrations 🎨, & descriptions, 32 chapters, downloadable Python workflows 🐍!

My university content in a more accessible format to reach a broader audience 🌍 🚀

geostatsguy.github.io/GeostatsPyDe...

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Reposted by Pierre Poulain

Marin Dacos @marind.bsky.social · 1d

Vous pouvez vous abonner à la lettre de la science ouverte. www.ouvrirlascience.fr/category/act...

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Reposted by Pierre Poulain

Cécile Arènes @carenes.bsky.social · 4d

je découvre SIESTA, un cloud confidentiel pour la recherche en lien avec EOSC et la slide 12 sur les principes FAIR pour des données sensibles répond bien à une de mes marottes
jcad2025.sciencesconf.org/file/1263911...

jcad2025.sciencesconf.org

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Reposted by Pierre Poulain

Robert Aboukhalil @robert.bio · 6d

Just published an interactive article about a magical algorithm known as the Burrows-Wheeler Transform, which powers sequence alignment tools like bowtie and bwa: sandbox.bio/concepts/bwt

It's also notoriously unintuitive so I'm hoping this article helps you build that intuition.

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Pierre Poulain @pierrepo.bsky.social · 6d

No. Biology

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Reposted by Pierre Poulain

Olga Seminck @oseminck.bsky.social · Jan 16

Aujourd'hui de 14h à 16h, je fais un tuto mate-shs : les LLMs pour les nuls. Soyez les bienvenus ! mate-shs.cnrs.fr/actions/tuto...

Les grands modèles de langues pour les nuls - MATE-SHS

Par Olga Seminck Le titre reflète l’esprit de ce tutoriel : une explication simple et accessible à tous. Attention, il ne s’agit pas de dire que vous êtes « nuls » ! En fait, ce terme était surtout de...

mate-shs.cnrs.fr

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Reposted by Pierre Poulain

Le Parisien Étudiant @leparisienetudiant.bsky.social · 7d

« On cherche un refuge » : à l’université Paris-Saclay, des doctorants dans le flou après la fermeture de leurs laboratoires pour raisons de sécurité
➡️ https://l.leparisien.fr/dzWY

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Reposted by Pierre Poulain

Albert Vilella, PhD. @albertvilella.bsky.social · 8d

#Bioinformatics

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Reposted by Pierre Poulain

Gaby Wald @gabywald.bsky.social · 9d

Ce weekend #FêteDeLaScience : je suis notamment passé voir @jebif.bsky.social (des gens sympas), un atelier pour enfants sur les #virus (et des cochons) !

#BioInfo #IntelligenceArtificielle #IA ...

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Isabelle Poutrin @ipoutrin.bsky.social · 12d

#ESR
Ne dites pas
"Je vais bientôt prendre ma retraite"
mais
"Je m'apprête à libérer de la masse salariale".

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Reposted by Pierre Poulain

Frank Noe @franknoe.bsky.social · 14d

Join our BioEmu project @msftresearch.bsky.social AI for Science. In Berlin DE or Cambridge UK:

aka.ms/bioemu-ml - #MachineLearning Researcher
aka.ms/bioemu-data - Data Engineer
aka.ms/bioemu-applied - Applied Researcher
aka.ms/bioemu-principal - Principal Applied Researcher

Search Jobs | Microsoft Careers

aka.ms

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Reposted by Pierre Poulain

Simon Phipps @meshed.cloud · 15d

The @EUCommission would like to hear your views on the governance and sustainability of critical open source software. The survey closes October 5th.

https://ec.europa.eu/eusurvey/runner/FOSSEPS_Governance_and_Sustainability_Survey

#OpenSource #governance #sustainability

Study of the European Commission: Survey on the Governance and Sustainability of Critical Open Source Software

ec.europa.eu

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Reposted by Pierre Poulain

Emilien Schultz @emilienschultz.bsky.social · 14d

Et j'ai pu présenter notre outil de recherche open source active tigger développé au @crestumr.bsky.social pour faire de la classification de texte !

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Reposted by Pierre Poulain

PyData Paris @pydataparis.bsky.social · Feb 19

📢We are excited to announce the keynote speakers for our 2025 conference:
- Alenka Frim from United.Cloud
- Ralf Gommers from @quansight.com
- Anita Graser from the Austrian Institute of Technology

Join us at PyData Paris at Cité des Sciences from Sep 30 to Oct 1, 2025.

medium.com/@PyDataParis...

PyData Paris 2025 Keynotes

We are thrilled to announce the keynote speakers for the upcoming PyData Paris 2025, the leading gathering of the open-source data science…

medium.com

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Reposted by Pierre Poulain

David Monniaux @monniauxd.bsky.social · 17d

Vous pouvez soutenir ma proposition à la Cour des Comptes d'examiner les marchés publics de voyagistes, notamment dans l'enseignement supérieur et la recherche :
participationcitoyenne.ccomptes.fr/processes/co...

#esr #TeamESR #HelpESR

Les marchés publics de voyagistes - Contributions - 2025 - Aidez-nous à enrichir notre programme de travail - Plateforme de participation de la Cour des Comptes

Corps de la contributionLes administrations et opérateurs publics, notamment ceux de l'enseignement supérieur et de la recherche, font appel à des agences de voyage (FCM, TravelPlanet…) pour l'hôtelle...

participationcitoyenne.ccomptes.fr

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Reposted by Pierre Poulain

petersuber @petersuber.fediscience.org.ap.brid.gy · 17d

Update. "#austria's military has switched from #microsoftoffice to #LibreOffice. The move was all about digital sovereignty, not cost savings. Other governments are moving away from Microsoft to protect their citizens' privacy." […]

Original post on fediscience.org

fediscience.org

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petersuber @petersuber.fediscience.org.ap.brid.gy · Jul 5

The French city of Lyon is dropping #Microsoft software in favor of #opensource alternatives. It doesn't want to depend on proprietary, closed-source software, and it doesn't want to depend on *American* software. It doesn't want "potential [US] governmental surveillance." […]

Original post on fediscience.org

fediscience.org

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Jules @juleswp.bsky.social · 18d

Les LLM « ne génèrent pas à proprement parler des connaissances, mais des textes donnant l’illusion du savoir sans en avoir la consistance »

Donc, non, les IA génératives ne sont pas un nouveau Wikipédia.

L’IA générative, un nouveau Wikipédia ?

Les intelligences artificielles génératives, comme Wikipédia avant elles, prétendent ouvrir un accès élargi et immédiat au savoir. Mais au débat collectif et transparent de l'encyclopédie participativ...

laviedesidees.fr

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Dr Elodie Chabrol @eloscicomm.bsky.social · 22d

👩‍🔬J'ai commencé un kit de démarrage "chercheuses en France" go.bsky.app/TBEzKC #FemmesEnScience

J'ai besoin de votre aide pour le remplir et donner de la visibilité aux chercheuses que vous connaissez et qui sont sur Bluesky !
▶️Taguez celles que vous connaissez, je les ajoute !

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petersuber @petersuber.fediscience.org.ap.brid.gy · Sep 10

The University of Utrecht is cancelling the #webofscience and offering training sessions on #OpenAlex.
https://www.uu.nl/en/news/access-to-web-of-science-will-end-on-1-january-2026

"Discontinuing Web of Science is a logical step that fits in with the UU vision on #OpenScience. Closed commercial […]

Original post on fediscience.org

fediscience.org

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Reposted by Pierre Poulain

IFB/ELIXIR-Fr @ifb-elixir-fr.bsky.social · 27d

🚨📢🖥 Server maintenance 🖥📢🚨
🗓️ From 6 to 8 October 2025, the IFB's tools and websites (IFB, #ABRomics, DSW, Fair-checker, OnDemand, ...) will be unavailable due to the IDRIS #servers being shut down for #maintenance.
Thank you for your understanding !
#data #bioinformatique #cluster #cloud

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Reposted by Pierre Poulain

Chris Aniszczyk @cra.dev · 27d

"Wasm 3.0 Completed" webassembly.org/news/2025-09...

Wasm 3.0 Completed - WebAssembly

WebAssembly (abbreviated Wasm) is a binary instruction format for a stack-based virtual machine. Wasm is designed as a portable compilation target for programming languages, enabling deployment on the...

webassembly.org

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Reposted by Pierre Poulain

Bérénice Batut @bebatut.bsky.social · 28d

Today is #InternationalMicroorganismDay, a chance to celebrate the invisible powerhouses shaping our health and ecosystems. With @galaxyproject.bsky.social, we're proud to support global research that decodes the secrets of microbes, from deadly pathogens to life-sustaining bacteria.

This image presents the Microbiology Galaxy Lab, a platform dedicated to One Health and ecological integrity, illustrating how it connects humans, animals, and the environment through the analysis of DNA, RNA, proteins, and metabolites using 315+ tool suites and 115+ workflows. On the left, it highlights ecosystem dynamics and biodiversity, covering areas such as microbial diversity, interactions, ecosystem modeling, strain discovery, pathway analysis, population omics, and temporal dynamics. On the right, it focuses on health and disease, addressing topics like clinical microbiota, antimicrobial resistance, pathogen profiling (viruses, bacteria, fungi, protozoa), virulence assessment, dysbiosis analysis, abundance quantification, outbreak modeling, biomarker correlation, and host interaction. The lab also emphasizes citizen science, education, and 35+ tutorials, promoting accessibility and knowledge sharing in microbiology research.

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Reposted by Pierre Poulain

Antoine Taly @ataly.bsky.social · 28d

Improving the Reliability of Molecular String Representations for Generative Chemistry | Journal of Chemical Information and Modeling pubs.acs.org/doi/full/10....

Improving the Reliability of Molecular String Representations for Generative Chemistry

Generative modeling for chemistry has advanced rapidly in recent years, but this surge in popularity raises a foundational question: which molecular representation is best suited for modern machine le...

pubs.acs.org

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