Caldas Lab
caldaslab.bsky.social
Caldas Lab
@caldaslab.bsky.social
Functional genomics of breast cancer lab based at the University of Cambridge
Reposted by Caldas Lab
1/2 Our update of the PREDICT breast prognostic and treatment benefit model is now published by BMC Research Notes.

rdcu.be/ePXTJ
PREDICT breast v4.0: an update to the PREDICT breast prognostic model
rdcu.be
November 15, 2025 at 6:30 PM
Reposted by Caldas Lab
PREDICT is free and an extremely helpful clinical aid!
@paulpharoah.bsky.social deserves 👏
1/2 Our update of the PREDICT breast prognostic and treatment benefit model is now published by BMC Research Notes.

rdcu.be/ePXTJ
PREDICT breast v4.0: an update to the PREDICT breast prognostic model
rdcu.be
November 17, 2025 at 12:37 PM
Reposted by Caldas Lab
Great to see our paper posted @bsky.app by @cp-cellrepmed.bsky.social!
This was the work of @kevinjtu.bsky.social while an MSc student @caldaslab.bsky.social!
Thanks to @stephensammut.bsky.social and @ruedalab.bsky.social our amazing collaborators!
Walking the walk always! Not talking the talk...
November 11, 2025 at 9:23 PM
Reposted by Caldas Lab
Fantastic work by @kevinjtu.bsky.social done as MSc @caldaslab.bsky.social in collaboration with @ruedalab.bsky.social and @stephensammut.bsky.social. #TME deconvolution in 15,000 breast cancers! #METABRIC
@ims-mrl.bsky.social @hebrewuniversity.bsky.social @lautenbergc.bsky.social
🥳🥳👍👍💪💪
Overall, our results suggest characterizing microenvironment composition in the clinic may provide critical prognostic markers that can complement current molecular classification for treatment selection and preventing recurrence.
November 10, 2025 at 6:40 PM
Reposted by Caldas Lab
My poor laptop wishes I learned how to use the cluster earlier, but it’s sacrifice was not in vain! We learned some important things about the breast cancer tumor microenvironment, described in our paper published today:
www.cell.com/cell-reports...

Here's the 🧵
November 10, 2025 at 5:24 PM
Reposted by Caldas Lab
I am proud of this impactful work published 15 years ago. Led by @paulpharoah.bsky.social and now cited 300 times! Tool breast.predict.cam is widely used and free! Walking the walk... not talking the talk!
@caldaslab.bsky.social

breast-cancer-research.biomedcentral.com/articles/10....
PREDICT: a new UK prognostic model that predicts survival following surgery for invasive breast cancer - Breast Cancer Research
Introduction The aim of this study was to develop and validate a prognostication model to predict overall and breast cancer specific survival for women treated for early breast cancer in the UK. Methods Using the Eastern Cancer Registration and Information Centre (ECRIC) dataset, information was collated for 5,694 women who had surgery for invasive breast cancer in East Anglia from 1999 to 2003. Breast cancer mortality models for oestrogen receptor (ER) positive and ER negative tumours were derived from these data using Cox proportional hazards, adjusting for prognostic factors and mode of cancer detection (symptomatic versus screen-detected). An external dataset of 5,468 patients from the West Midlands Cancer Intelligence Unit (WMCIU) was used for validation. Results Differences in overall actual and predicted mortality were <1% at eight years for ECRIC (18.9% vs. 19.0%) and WMCIU (17.5% vs. 18.3%) with area under receiver-operator-characteristic curves (AUC) of 0.81 and 0.79 respectively. Differences in breast cancer specific actual and predicted mortality were <1% at eight years for ECRIC (12.9% vs. 13.5%) and <1.5% at eight years for WMCIU (12.2% vs. 13.6%) with AUC of 0.84 and 0.82 respectively. Model calibration was good for both ER positive and negative models although the ER positive model provided better discrimination (AUC 0.82) than ER negative (AUC 0.75). Conclusions We have developed a prognostication model for early breast cancer based on UK cancer registry data that predicts breast cancer survival following surgery for invasive breast cancer and includes mode of detection for the first time. The model is well calibrated, provides a high degree of discrimination and has been validated in a second UK patient cohort.
breast-cancer-research.biomedcentral.com
October 1, 2025 at 12:40 PM
Reposted by Caldas Lab
Stay tuned for the next major paper from @caldaslab.bsky.social and @ruedalab.bsky.social led by @kevinjtu.bsky.social!
TME deconvolution from bulk RNA expression of nearly 15,000 breast cancers!!
@ims-mrl.bsky.social
@lautenbergc.bsky.social
September 29, 2025 at 9:13 AM
Reposted by Caldas Lab
Paper now accepted @cp-cellrepmed.bsky.social! 🎉🥳👏💪
Amazing @caldaslab.bsky.social!! So proud!
October 10, 2025 at 2:49 PM
Reposted by Caldas Lab
Amazing meeting about to start! @caldaslab.bsky.social continues to walk the walk!
October 16, 2025 at 5:46 AM
Reposted by Caldas Lab
With my dear friend James Brenton. @caldaslab.bsky.social knows no borders!
October 19, 2025 at 4:24 PM
Reposted by Caldas Lab
@helloeacr.bsky.social leads by walking the walk! Many just talk the talk...
The numbers of women in science falls substantially at the transition from postdoc to independent investigator/ PI

So what can we do to prevent this?

One initiative we now organise annually at #EACR is the highly successful 'Women in Leadership' workshop ⏬

#WomenInScience 🧪
@helloeacr.bsky.social
The EACR’s Women in Leadership workshop returns for 2025 - The Cancer Researcher
Ahead of the EACR 2025 Congress in Lisbon, Portugal, the EACR once again hosted its popular Women in Leadership Workshop on 16 June 2025. The event brought together 26 early-career female cancer resea...
magazine.eacr.org
August 13, 2025 at 7:14 PM
Reposted by Caldas Lab
10 years we contributed to this seminal perspective on tumor heterogeneity @naturemedicine.bsky.social! @caldaslab.bsky.social always walking the walk! Leadership in science is not about titles it is about contributions!

www.nature.com/articles/nm....
Toward understanding and exploiting tumor heterogeneity - Nature Medicine
In this Perspective, attendees of the Herrenhausen Tumour Heterogeneity meeting discuss the challenges in understanding tumour heterogeneity and propose ways forward for overcoming these hurdles.
www.nature.com
August 8, 2025 at 9:39 PM
Reposted by Caldas Lab
Sunset in Santa Cruz, Portugal.
August 11, 2025 at 7:56 PM
Reposted by Caldas Lab
Huge congratulations to our dear colleagues, Prof. Alexander Sigal and Prof. Carlos Caldas, on receiving the prestigious “Or” (אור) grant!
This national award supports the recruitment of world-class scientists to Israeli universities — and we are proud to have them as part of the Lautenberg Center.
August 4, 2025 at 2:26 PM
Reposted by Caldas Lab
30 years later!! The first demonstration that p16 was a tumor suppressor gene in primary human cancers (in this case pancreas). Continues to be cited! Proud of having done this! >1000 citations!!!

www.nature.com/articles/ng0...
Frequent somatic mutations and homozygous deletions of the p16 (MTS1) gene in pancreatic adenocarcinoma - Nature Genetics
Nature Genetics - Frequent somatic mutations and homozygous deletions of the p16 (MTS1) gene in pancreatic adenocarcinoma
www.nature.com
August 1, 2025 at 10:29 AM
Reposted by Caldas Lab
31 years ago pioneering molecular diagnostics! Excellence in academia is not made of hollow 'leadership' titles! It is made by walking the walk as @caldaslab.bsky.social consistently does!!

aacrjournals.org/cancerres/ar...
Detection of K-ras Mutations in the Stool of Patients with Pancreatic Adenocarcinoma and Pancreatic Ductal Hyperplasia
Abstract. Pancreatic adenocarcinoma is the fifth leading cause of cancer death in the United States. Mutations in the K-ras oncogene occur in 85% of pancreatic adenocarcinomas and have also been ident...
aacrjournals.org
August 1, 2025 at 3:31 PM
Reposted by Caldas Lab
Amazing new colleagues @hebrewuniversity.bsky.social and the Lautenberg Center!
What powers a stronger immune response to cancer? A new study by PhD student Omri Yosef & Prof. Michael Berger shows that blocking a single protein, Ant2, can rewire T cells’ energy systems—boosting their ability to hunt down and destroy tumors.

Read here: www.jpost.com/health-and-w...
Israeli researchers find way to boost cancer-fighting | The Jerusalem Post
This strategy is part of a growing trend in immunotherapy that focuses not just on guiding immune responses, but on upgrading the cells themselves — enhancing their efficiency from within.
www.jpost.com
August 1, 2025 at 6:31 PM
Reposted by Caldas Lab
Summer holidays for a Portuguese have to be by the beach!
August 1, 2025 at 9:50 PM
Reposted by Caldas Lab
Amazing coast of Portugal!
August 2, 2025 at 4:39 PM
Reposted by Caldas Lab
With friends from my Lisbon Medical School class!
August 6, 2025 at 10:08 PM